Statistical Learning
An Empirical Study into Annotator Agreement, Ground Truth Estimation, and Algorithm Evaluation
Lampert, Thomas A., Stumpf, André, Gançarski, Pierre
Although agreement between annotators has been studied in the past from a statistical viewpoint, little work has attempted to quantify the extent to which this phenomenon affects the evaluation of computer vision (CV) object detection algorithms. Many researchers utilise ground truth (GT) in experiments and more often than not this GT is derived from one annotator's opinion. How does the difference in opinion affect an algorithm's evaluation? Four examples of typical CV problems are chosen, and a methodology is applied to each to quantify the inter-annotator variance and to offer insight into the mechanisms behind agreement and the use of GT. It is found that when detecting linear objects annotator agreement is very low. The agreement in object position, linear or otherwise, can be partially explained through basic image properties. Automatic object detectors are compared to annotator agreement and it is found that a clear relationship exists. Several methods for calculating GTs from a number of annotations are applied and the resulting differences in the performance of the object detectors are quantified. It is found that the rank of a detector is highly dependent upon the method used to form the GT. It is also found that although the STAPLE and LSML GT estimation methods appear to represent the mean of the performance measured using the individual annotations, when there are few annotations, or there is a large variance in them, these estimates tend to degrade. Furthermore, one of the most commonly adopted annotation combination methods--consensus voting--accentuates more obvious features, which results in an overestimation of the algorithm's performance. Finally, it is concluded that in some datasets it may not be possible to state with any confidence that one algorithm outperforms another when evaluating upon one GT and a method for calculating confidence bounds is discussed.
Installing XGBoost on Mac OSX (IT Best Kept Secret Is Optimization)
OSX is much better than Windows, isn't it? That's a common wisdom, and it seemed to be confirmed once more when I installed XGBoost on both OS. Before I deep dive, let me briefly describe XGBoost. It is a machine learning algorithm that yields great results on recent Kaggle competitions. I decided to install it on my laptops, an old PC running Windows 7, and a brand new Mac Pro running OSX.
My Data Science Apprenticeship Project
Any author would like to know if his/her article will be successful or not. Here is an attempt to deal with this task. We crawled 5000 URLs and for each URL we downloaded the title, body of the article and parameters: number of likes (not including Facebook likes), number of comments, number of views, article creation date and date of the last comment. First, we got rid of empty (or deleted), very short (less than 100 characters long) and "not found" articles, thus getting 2000 articles with associated parameters. Then we removed articles with missing parameters and ended up with only 1207 articles. Second, for every article we conducted tokenization of words.
Top Data Mining Algorithms Identified by IEEE & Related Python Resources
IEEE International Conference on Data Mining identified 10 algorithms in 2006 using surveys from past winners and voting. This is a list of those algorithms a short description and related python resources. The detailed paper is given here. C4.5 is an algorithm used to generate a decision tree developed by Ross Quinlan. The decision trees generated by C4.5 can be used for classification, and for this reason, C4.5 is often referred to as a statistical classifier.
Jackknife and linear regression in Excel: implementation and comparison
The comparison is performed on a data set where linear regression works well: salary offered to a candidate, based on programming language requirements in the job ad: Python, R or SQL. This is a follow-up to the article highest paying programming skills. The increased accuracy of linear regression estimates is negligible, and well below the noise level present in the data set. The Jackknife method has the advantage to be more stable, easy to code, easy to understand (no need to know matrix algebra), and easy to interpret (meaningful coefficients). Jackknife is not the first regression approximation developed by the author: check my book pages 172-176 for other examples.
Fast nonlinear embeddings via structured matrices
Choromanski, Krzysztof, Fagan, Francois
We present a new paradigm for speeding up randomized computations of several frequently used functions in machine learning. In particular, our paradigm can be applied for improving computations of kernels based on random embeddings. Above that, the presented framework covers multivariate randomized functions. As a byproduct, we propose an algorithmic approach that also leads to a significant reduction of space complexity. Our method is based on careful recycling of Gaussian vectors into structured matrices that share properties of fully random matrices. The quality of the proposed structured approach follows from combinatorial properties of the graphs encoding correlations between rows of these structured matrices. Our framework covers as special cases already known structured approaches such as the Fast Johnson-Lindenstrauss Transform, but is much more general since it can be applied also to highly nonlinear embeddings. We provide strong concentration results showing the quality of the presented paradigm.
Weighted Spectral Cluster Ensemble
Yousefnezhad, Muhammad, Zhang, Daoqiang
Abstract--Clustering explores meaningful patterns in the non-labeled data sets. Cluster Ensemble Selection (CES) is a new approach, which can combine individual clustering results for increasing the performance of the final results. Although CES can achieve better final results in comparison with individual clustering algorithms and cluster ensemble methods, its performance can be dramatically affected by its consensus diversity metric and thresholding procedure. There are two problems in CES: 1) most of the diversity metrics is based on heuristic Shannon's entropy and 2) estimating threshold values are really hard in practice. The main goal of this paper is proposing a robust approach for solving the above mentioned problems. Accordingly, this paper develops a novel framework for clustering problems, which is called Weighted Spectral Cluster Ensemble (WSCE), by exploiting some concepts from community detection arena and graph based clustering. Under this framework, a new version of spectral clustering, which is called Two Kernels Spectral Clustering, is used for generating graphs based individual clustering results. Further, by using modularity, which is a famous metric in the community detection, on the transformed graph representation of individual clustering results, our approach provides an effective diversity estimation for individual clustering results. Moreover, this paper introduces a new approach for combining the evaluated individual clustering results without the procedure of thresh-olding. Experimental study on varied data sets demonstrates that the prosed approach achieves superior performance to state-of-the-art methods. Clustering, the art of discovering meaningful patterns in the non-labeled data sets, is one of the main tasks in machine learning.