Statistical Learning
Phase Transitions for High Dimensional Clustering and Related Problems
Jin, Jiashun, Ke, Zheng Tracy, Wang, Wanjie
Consider a two-class clustering problem where we observe $X_i = \ell_i \mu + Z_i$, $Z_i \stackrel{iid}{\sim} N(0, I_p)$, $1 \leq i \leq n$. The feature vector $\mu\in R^p$ is unknown but is presumably sparse. The class labels $\ell_i\in\{-1, 1\}$ are also unknown and the main interest is to estimate them. We are interested in the statistical limits. In the two-dimensional phase space calibrating the rarity and strengths of useful features, we find the precise demarcation for the Region of Impossibility and Region of Possibility. In the former, useful features are too rare/weak for successful clustering. In the latter, useful features are strong enough to allow successful clustering. The results are extended to the case of colored noise using Le Cam's idea on comparison of experiments. We also extend the study on statistical limits for clustering to that for signal recovery and that for hypothesis testing. We compare the statistical limits for three problems and expose some interesting insight. We propose classical PCA and Important Features PCA (IF-PCA) for clustering. For a threshold $t > 0$, IF-PCA clusters by applying classical PCA to all columns of $X$ with an $L^2$-norm larger than $t$. We also propose two aggregation methods. For any parameter in the Region of Possibility, some of these methods yield successful clustering. We find an interesting phase transition for IF-PCA. Our results require delicate analysis, especially on post-selection Random Matrix Theory and on lower bound arguments.
Efficient Smoothed Concomitant Lasso Estimation for High Dimensional Regression
Ndiaye, Eugene, Fercoq, Olivier, Gramfort, Alexandre, Leclère, Vincent, Salmon, Joseph
In high dimensional settings, sparse structures are crucial for efficiency, both in term of memory, computation and performance. It is customary to consider $\ell_1$ penalty to enforce sparsity in such scenarios. Sparsity enforcing methods, the Lasso being a canonical example, are popular candidates to address high dimension. For efficiency, they rely on tuning a parameter trading data fitting versus sparsity. For the Lasso theory to hold this tuning parameter should be proportional to the noise level, yet the latter is often unknown in practice. A possible remedy is to jointly optimize over the regression parameter as well as over the noise level. This has been considered under several names in the literature: Scaled-Lasso, Square-root Lasso, Concomitant Lasso estimation for instance, and could be of interest for confidence sets or uncertainty quantification. In this work, after illustrating numerical difficulties for the Smoothed Concomitant Lasso formulation, we propose a modification we coined Smoothed Concomitant Lasso, aimed at increasing numerical stability. We propose an efficient and accurate solver leading to a computational cost no more expansive than the one for the Lasso. We leverage on standard ingredients behind the success of fast Lasso solvers: a coordinate descent algorithm, combined with safe screening rules to achieve speed efficiency, by eliminating early irrelevant features.
Bayesian Optimization of Machine Learning Models
Many predictive and machine learning models have structural or tuning parameters that cannot be directly estimated from the data. For example, when using K-nearest neighbor model, there is no analytical estimator for K (the number of neighbors). Typically, resampling is used to get good performance estimates of the model for a given set of values for K and the one associated with the best results is used. This is basically a grid search procedure. However, there are other approaches that can be used.
What to do with an industrial/manufacturing data set? • /r/MachineLearning
I am a chemical engineer who is learning programming. Until now I've mostly been working on building interfaces using web programming. Recently I got access to all of my company's lab/quality, inventory, and PLC/manufacturing data. I am interested in digging into this data. I am (sort of) versed in Python, and have done a few tutorials with sklearn and the linear regression algorithm.
Data Normalization for Dummies Using SAS
Life scientists often struggle to normalize non-parametric data or ignore normalization prior to data analysis. Based on statistical principles, logarithmic, square-root and arcsine transformations are commonly adopted to normalize non-parametric data for parametric tests. Several other transformations are also available for normalizing data. However, for many, identification of right transformation for non-parametric data is a tricky job. The objective of this paper is to develop a SAS program that identifies right transformation and normalize non-parametric data for regression analysis.
Understanding data mining clustering methods
When you go to the grocery store, you see that items of a similar nature are displayed nearby to each other. When you organize the clothes in your closet, you put similar items together (e.g. Every personal organizing tip on the web to save you from your clutter suggests some sort of grouping of similar items together. Even we don't notice it, we are involved in grouping similar objects together in every aspect of our life. This is called clustering in machine learning, so in this post I will provide an overview of data mining clustering methods. In machine learning or data mining, clustering assigns similar objects together in order to discover structures in data that doesn't have any labels.
szilard/benchm-ml
This project aims at a minimal benchmark for scalability, speed and accuracy of commonly used implementations of a few machine learning algorithms. The target of this study is binary classification with numeric and categorical inputs (of limited cardinality i.e. not very sparse) and no missing data, perhaps the most common problem in business applications (e.g. If the input matrix is of n x p, n is varied as 10K, 100K, 1M, 10M, while p is 1K (after expanding the categoricals into dummy variables/one-hot encoding). This particular type of data structure/size (the largest) stems from this author's interest in some particular business applications. If your software tool of choice is not here, your can benchmark it with minimal work with the following instructions.)
What are the Best Machine Learning Packages in R? R-bloggers
The most common question asked by prospective data scientists is – "What is the best programming language for Machine Learning?" The answer to this question always results in a debate whether to choose R, Python or MATLAB for Machine Learning. Nobody can, in reality, answer the question as to whether Python or R is best language for Machine Learning. However, the programming language one should choose for machine learning directly depends on the requirements of a given data problem, the likes and preferences of the data scientist and the context of machine learning activities they want to perform. According to a survey on Kaggler's Favourite Tools, the open source R programming language turned out to be the favourite among 543 Kagglers of the 1714 Kaggler's listing their data science tools.