We present a consistent approach to density-based clustering, which satisfies a stability theorem that holds without any distributional assumptions. We also show that the algorithm can be combined with standard procedures to extract a flat clustering from a hierarchical clustering, and that the resulting flat clustering algorithms satisfy stability theorems. The algorithms and proofs are inspired by topological data analysis.

Transfer learning, or domain adaptation, is concerned with machine learning problems in which training and testing data come from possibly different distributions (denoted as $\mu$ and $\mu'$, respectively). In this work, we give an information-theoretic analysis on the generalization error and the excess risk of transfer learning algorithms, following a line of work initiated by Russo and Zhou. Our results suggest, perhaps as expected, that the Kullback-Leibler (KL) divergence $D(mu||mu')$ plays an important role in characterizing the generalization error in the settings of domain adaptation. Specifically, we provide generalization error upper bounds for general transfer learning algorithms and extend the results to a specific empirical risk minimization (ERM) algorithm where data from both distributions are available in the training phase. We further apply the method to iterative, noisy gradient descent algorithms, and obtain upper bounds which can be easily calculated, only using parameters from the learning algorithms. A few illustrative examples are provided to demonstrate the usefulness of the results. In particular, our bound is tighter in specific classification problems than the bound derived using Rademacher complexity.

Gradient tree boosting (e.g. XGB) is one of the most widely usedmachine learning models in practice. How to build a secure XGB inface of data isolation problem becomes a hot research topic. However, existing works tend to leak intermediate information and thusraise potential privacy risk. In this paper, we propose a novel framework for two parties to build secure XGB with vertically partitioneddata. Specifically, we associate Homomorphic Encryption (HE) domain with Secret Sharing (SS) domain by providing the two-waytransformation primitives. The framework generally promotes theefficiency for privacy preserving machine learning and offers theflexibility to implement other machine learning models. Then weelaborate two secure XGB training algorithms as well as a corresponding prediction algorithm under the hybrid security domains.Next, we compare our proposed two training algorithms throughboth complexity analysis and experiments. Finally, we verify themodel performance on benchmark dataset and further apply ourwork to a real-world scenario.

In some complicated datasets, due to the presence of noisy data points and outliers, cluster validity indices can give conflicting results in determining the optimal number of clusters. This paper presents a new validity index for fuzzy-possibilistic c-means clustering called Fuzzy-Possibilistic)FP (index, which works well in the presence of clusters that vary in shape and density. Moreover, FPCM like most of the clustering algorithms is susceptible to some initial parameters. In this regard, in addition to the number of clusters, FPCM requires a priori selection of the degree of fuzziness (m) and the degree of typicality (η). Therefore, we presented an efficient procedure for determining an optimal value for and. The proposed approach has been evaluated using several synthetic and real-world datasets. Final computational results demonstrate the capabilities and reliability of the proposed approach compared with several well-known fuzzy validity indices in the literature. Furthermore, to clarify the ability of the proposed method in real applications, the proposed method is implemented in microarray gene expression data clustering and medical image segmentation.

Personalization of cardiac models involves the optimization of organ tissue properties that vary spatially over the non-Euclidean geometry model of the heart. To represent the high-dimensional (HD) unknown of tissue properties, most existing works rely on a low-dimensional (LD) partitioning of the geometrical model. While this exploits the geometry of the heart, it is of limited expressiveness to allow partitioning that is small enough for effective optimization. Recently, a variational auto-encoder (VAE) was utilized as a more expressive generative model to embed the HD optimization into the LD latent space. Its Euclidean nature, however, neglects the rich geometrical information in the heart. In this paper, we present a novel graph convolutional VAE to allow generative modeling of non-Euclidean data, and utilize it to embed Bayesian optimization of large graphs into a small latent space. This approach bridges the gap of previous works by introducing an expressive generative model that is able to incorporate the knowledge of spatial proximity and hierarchical compositionality of the underlying geometry. It further allows transferring of the learned features across different geometries, which was not possible with a regular VAE. We demonstrate these benefits of the presented method in synthetic and real data experiments of estimating tissue excitability in a cardiac electrophysiological model.

Machine learning (ML) is the field of training machines to achieve high level of cognition and perform human-like analysis. Since ML is a data-driven approach, it seemingly fits into our daily lives and operations as well as complex and interdisciplinary fields. With the rise of commercial, open-source and user-catered ML tools, a key question often arises whenever ML is applied to explore a phenomenon or a scenario: what constitutes a good ML model? Keeping in mind that a proper answer to this question depends on a variety of factors, this work presumes that a good ML model is one that optimally performs and best describes the phenomenon on hand. From this perspective, identifying proper assessment metrics to evaluate performance of ML models is not only necessary but is also warranted. As such, this paper examines a number of the most commonly-used performance fitness and error metrics for regression and classification algorithms, with emphasis on engineering applications.

Learning-to-rank (LTR) is a class of supervised learning techniques that apply to ranking problems dealing with a large number of features. The popularity and widespread application of LTR models in prioritizing information in a variety of domains makes their scrutability vital in today's landscape of fair and transparent learning systems. However, limited work exists that deals with interpreting the decisions of learning systems that output rankings. In this paper we propose a model agnostic local explanation method that seeks to identify a small subset of input features as explanation to a ranking decision. We introduce new notions of validity and completeness of explanations specifically for rankings, based on the presence or absence of selected features, as a way of measuring goodness. We devise a novel optimization problem to maximize validity directly and propose greedy algorithms as solutions. In extensive quantitative experiments we show that our approach outperforms other model agnostic explanation approaches across pointwise, pairwise and listwise LTR models in validity while not compromising on completeness.

Many aspects of the geometry of loss functions in deep learning remain mysterious. In this paper, we work toward a better understanding of the geometry of the loss function $L$ of overparameterized feedforward neural networks. In this setting, we identify several components of the critical locus of $L$ and study their geometric properties. For networks of depth $\ell \geq 4$, we identify a locus of critical points we call the star locus $S$. Within $S$ we identify a positive-dimensional sublocus $C$ with the property that for $p \in C$, $p$ is a degenerate critical point, and no existing theoretical result guarantees that gradient descent will not converge to $p$. For very wide networks, we build on earlier work and show that all critical points of $L$ are degenerate, and give lower bounds on the number of zero eigenvalues of the Hessian at each critical point. For networks that are both deep and very wide, we compare the growth rates of the zero eigenspaces of the Hessian at all the different families of critical points that we identify. The results in this paper provide a starting point to a more quantitative understanding of the properties of various components of the critical locus of $L$.

Real-world networks often exist with multiple views, where each view describes one type of interaction among a common set of nodes. For example, on a video-sharing network, while two user nodes are linked if they have common favorite videos in one view, they can also be linked in another view if they share common subscribers. Unlike traditional single-view networks, multiple views maintain different semantics to complement each other. In this paper, we propose MANE, a multi-view network embedding approach to learn low-dimensional representations. Similar to existing studies, MANE hinges on diversity and collaboration - while diversity enables views to maintain their individual semantics, collaboration enables views to work together. However, we also discover a novel form of second-order collaboration that has not been explored previously, and further unify it into our framework to attain superior node representations. Furthermore, as each view often has varying importance w.r.t. different nodes, we propose MANE+, an attention-based extension of MANE to model node-wise view importance. Finally, we conduct comprehensive experiments on three public, real-world multi-view networks, and the results demonstrate that our models consistently outperform state-of-the-art approaches.

Coronavirus Disease 2019 (COVID-19) is a rapidly emerging respiratory disease caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Due to the rapid human-to-human transmission of SARS-CoV-2, many healthcare systems are at risk of exceeding their healthcare capacities, in particular in terms of SARS-CoV-2 tests, hospital and intensive care unit (ICU) beds and mechanical ventilators. Predictive algorithms could potentially ease the strain on healthcare systems by identifying those who are most likely to receive a positive SARS-CoV-2 test, be hospitalised or admitted to the ICU. Here, we study clinical predictive models that estimate, using machine learning and based on routinely collected clinical data, which patients are likely to receive a positive SARS-CoV-2 test, require hospitalisation or intensive care. To evaluate the predictive performance of our models, we perform a retrospective evaluation on clinical and blood analysis data from a cohort of 5644 patients. Our experimental results indicate that our predictive models identify (i) patients that test positive for SARS-CoV-2 a priori at a sensitivity of 75% (95% CI: 67%, 81%) and a specificity of 49% (95% CI: 46%, 51%), (ii) SARS-CoV-2 positive patients that require hospitalisation with 0.92 AUC (95% CI: 0.81, 0.98), and (iii) SARS-CoV-2 positive patients that require critical care with 0.98 AUC (95% CI: 0.95, 1.00). In addition, we determine which clinical features are predictive to what degree for each of the aforementioned clinical tasks. Our results indicate that predictive models trained on routinely collected clinical data could be used to predict clinical pathways for COVID-19, and therefore help inform care and prioritise resources.