Bayesian approaches to reconstructing the evolutionary history of languages rely on the tree model, which assumes that these languages descended from a common ancestor and underwent modifications over time. However, this assumption can be violated to different extents due to contact and other factors. Understanding the degree to which this assumption is violated is crucial for validating the accuracy of phylolinguistic inference. In this paper, we propose a simple sanity check: projecting a reconstructed tree onto a space generated by principal component analysis. By using both synthetic and real data, we demonstrate that our method effectively visualizes anomalies, particularly in the form of jogging.

The demand for collaborative and private bandit learning across multiple agents is surging due to the growing quantity of data generated from distributed systems. Federated bandit learning has emerged as a promising framework for private, efficient, and decentralized online learning. However, almost all previous works rely on strong assumptions of client homogeneity, i.e., all participating clients shall share the same bandit model; otherwise, they all would suffer linear regret. This greatly restricts the application of federated bandit learning in practice. In this work, we introduce a new approach for federated bandits for heterogeneous clients, which clusters clients for collaborative bandit learning under the federated learning setting. Our proposed algorithm achieves non-trivial sub-linear regret and communication cost for all clients, subject to the communication protocol under federated learning that at anytime only one model can be shared by the server.

In the long-tailed recognition field, the Decoupled Training paradigm has demonstrated remarkable capabilities among various methods. This paradigm decouples the training process into separate representation learning and classifier re-training. Previous works have attempted to improve both stages simultaneously, making it difficult to isolate the effect of classifier re-training. Furthermore, recent empirical studies have demonstrated that simple regularization can yield strong feature representations, emphasizing the need to reassess existing classifier re-training methods. In this study, we revisit classifier re-training methods based on a unified feature representation and re-evaluate their performances. We propose a new metric called Logits Magnitude as a superior measure of model performance, replacing the commonly used Weight Norm. However, since it is hard to directly optimize the new metric during training, we introduce a suitable approximate invariant called Regularized Standard Deviation. Based on the two newly proposed metrics, we prove that reducing the absolute value of Logits Magnitude when it is nearly balanced can effectively decrease errors and disturbances during training, leading to better model performance. Motivated by these findings, we develop a simple logits retargeting approach (LORT) without the requirement of prior knowledge of the number of samples per class. LORT divides the original one-hot label into small true label probabilities and large negative label probabilities distributed across each class. Our method achieves state-of-the-art performance on various imbalanced datasets, including CIFAR100-LT, ImageNet-LT, and iNaturalist2018.

Sparse basis recovery is a classical and important statistical learning problem when the number of model dimensions $p$ is much larger than the number of samples $n$. However, there has been little work that studies sparse basis recovery in the Federated Learning (FL) setting, where the client data's differential privacy (DP) must also be simultaneously protected. In particular, the performance guarantees of existing DP-FL algorithms (such as DP-SGD) will degrade significantly when $p \gg n$, and thus, they will fail to learn the true underlying sparse model accurately. In this work, we develop a new differentially private sparse basis recovery algorithm for the FL setting, called SPriFed-OMP. SPriFed-OMP converts OMP (Orthogonal Matching Pursuit) to the FL setting. Further, it combines SMPC (secure multi-party computation) and DP to ensure that only a small amount of noise needs to be added in order to achieve differential privacy. As a result, SPriFed-OMP can efficiently recover the true sparse basis for a linear model with only $n = O(\sqrt{p})$ samples. We further present an enhanced version of our approach, SPriFed-OMP-GRAD based on gradient privatization, that improves the performance of SPriFed-OMP. Our theoretical analysis and empirical results demonstrate that both SPriFed-OMP and SPriFed-OMP-GRAD terminate in a small number of steps, and they significantly outperform the previous state-of-the-art DP-FL solutions in terms of the accuracy-privacy trade-off.

This paper explores the influence of Italian high school students' proficiency in mathematics and the Italian language on their university enrolment choices, specifically focusing on STEM (Science, Technology, Engineering, and Mathematics) courses. We distinguish between students from scientific and humanistic backgrounds in high school, providing valuable insights into their enrolment preferences. Furthermore, we investigate potential gender differences in response to similar previous educational choices and achievements. The study employs gradient boosting methodology, known for its high predicting performance and ability to capture non-linear relationships within data, and adjusts for variables related to the socio-demographic characteristics of the students and their previous educational achievements. Our analysis reveals significant differences in the enrolment choices based on previous high school achievements. The findings shed light on the complex interplay of academic proficiency, gender, and high school background in shaping students' choices regarding university education, with implications for educational policy and future research endeavours.

Operating units often experience various failure modes in complex systems, leading to distinct degradation paths. Relying on a prognostic model trained on a single failure mode may lead to poor generalization performance across multiple failure modes. Therefore, accurately identifying the failure mode is of critical importance. Current prognostic approaches either ignore failure modes during degradation or assume known failure mode labels, which can be challenging to acquire in practice. Moreover, the high dimensionality and complex relations of sensor signals make it challenging to identify the failure modes accurately. To address these issues, we propose a novel failure mode diagnosis method that leverages a dimension reduction technique called UMAP (Uniform Manifold Approximation and Projection) to project and visualize each unit's degradation trajectory into a lower dimension. Then, using these degradation trajectories, we develop a time series-based clustering method to identify the training units' failure modes. Finally, we introduce a monotonically constrained prognostic model to predict the failure mode labels and RUL of the test units simultaneously using the obtained failure modes of the training units. The proposed prognostic model provides failure mode-specific RUL predictions while preserving the monotonic property of the RUL predictions across consecutive time steps. We evaluate the proposed model using a case study with the aircraft gas turbine engine dataset.

Open-set graph learning is a practical task that aims to classify the known class nodes and to identify unknown class samples as unknowns. Conventional node classification methods usually perform unsatisfactorily in open-set scenarios due to the complex data they encounter, such as out-of-distribution (OOD) data and in-distribution (IND) noise. OOD data are samples that do not belong to any known classes. They are outliers if they occur in training (OOD noise), and open-set samples if they occur in testing. IND noise are training samples which are assigned incorrect labels. The existence of IND noise and OOD noise is prevalent, which usually cause the ambiguity problem, including the intra-class variety problem and the inter-class confusion problem. Thus, to explore robust open-set learning methods is necessary and difficult, and it becomes even more difficult for non-IID graph data.To this end, we propose a unified framework named ROG$_{PL}$ to achieve robust open-set learning on complex noisy graph data, by introducing prototype learning. In specific, ROG$_{PL}$ consists of two modules, i.e., denoising via label propagation and open-set prototype learning via regions. The first module corrects noisy labels through similarity-based label propagation and removes low-confidence samples, to solve the intra-class variety problem caused by noise. The second module learns open-set prototypes for each known class via non-overlapped regions and remains both interior and border prototypes to remedy the inter-class confusion problem.The two modules are iteratively updated under the constraints of classification loss and prototype diversity loss. To the best of our knowledge, the proposed ROG$_{PL}$ is the first robust open-set node classification method for graph data with complex noise.

Dysarthria, a condition resulting from impaired control of the speech muscles due to neurological disorders, significantly impacts the communication and quality of life of patients. The condition's complexity, human scoring and varied presentations make its assessment and management challenging. This study presents a transformer-based framework for automatically assessing dysarthria severity from raw speech data. It can offer an objective, repeatable, accessible, standardised and cost-effective and compared to traditional methods requiring human expert assessors. We develop a transformer framework, called Speaker-Agnostic Latent Regularisation (SALR), incorporating a multi-task learning objective and contrastive learning for speaker-independent multi-class dysarthria severity classification. The multi-task framework is designed to reduce reliance on speaker-specific characteristics and address the intrinsic intra-class variability of dysarthric speech. We evaluated on the Universal Access Speech dataset using leave-one-speaker-out cross-validation, our model demonstrated superior performance over traditional machine learning approaches, with an accuracy of $70.48\%$ and an F1 score of $59.23\%$. Our SALR model also exceeded the previous benchmark for AI-based classification, which used support vector machines, by $16.58\%$. We open the black box of our model by visualising the latent space where we can observe how the model substantially reduces speaker-specific cues and amplifies task-specific ones, thereby showing its robustness. In conclusion, SALR establishes a new benchmark in speaker-independent multi-class dysarthria severity classification using generative AI. The potential implications of our findings for broader clinical applications in automated dysarthria severity assessments.

Episodic memory plays a crucial role in various cognitive processes, such as the ability to mentally recall past events. While cognitive science emphasizes the significance of spatial context in the formation and retrieval of episodic memory, the current primary approach to implementing episodic memory in AI systems is through transformers that store temporally ordered experiences, which overlooks the spatial dimension. As a result, it is unclear how the underlying structure could be extended to incorporate the spatial axis beyond temporal order alone and thereby what benefits can be obtained. To address this, this paper explores the use of Spatially-Aware Transformer models that incorporate spatial information. These models enable the creation of place-centric episodic memory that considers both temporal and spatial dimensions. Adopting this approach, we demonstrate that memory utilization efficiency can be improved, leading to enhanced accuracy in various place-centric downstream tasks. Additionally, we propose the Adaptive Memory Allocator, a memory management method based on reinforcement learning that aims to optimize efficiency of memory utilization. Our experiments demonstrate the advantages of our proposed model in various environments and across multiple downstream tasks, including prediction, generation, reasoning, and reinforcement learning. The source code for our models and experiments will be available at https://github.com/junmokane/spatially-aware-transformer.

Gastric and oesophageal (OG) cancers are the leading causes of cancer mortality worldwide. In OG cancers, recent studies have showed that PDL1 immune checkpoint inhibitors (ICI) in combination with chemotherapy improves patient survival. However, our understanding of the tumour immune microenvironment in OG cancers remains limited. In this study, we interrogate multiplex immunofluorescence (mIF) images taken from patients with advanced Oesophagogastric Adenocarcinoma (OGA) who received first-line fluoropyrimidine and platinum-based chemotherapy in the PLATFORM trial (NCT02678182) to predict the efficacy of the treatment and to explore the biological basis of patients responding to maintenance durvalumab (PDL1 inhibitor). Our proposed Artificial Intelligence (AI) based marker successfully identified responder from non-responder (p < 0.05) as well as those who could potentially benefit from ICI with statistical significance (p < 0.05) for both progression free and overall survival. Our findings suggest that T cells that express FOXP3 seem to heavily influence the patient treatment response and survival outcome. We also observed that higher levels of CD8+PD1+ cells are consistently linked to poor prognosis for both OS and PFS, regardless of ICI.