Dimensionality Reduction
Dimensionality Reduction Using the Sparse Linear Model
We propose an approach for linear unsupervised dimensionality reduction, based on the sparse linear model that has been used to probabilistically interpret sparse coding. We formulate an optimization problem for learning a linear projection from the original signal domain to a lower-dimensional one in a way that approximately preserves, in expectation, pairwise inner products in the sparse domain. We derive solutions to the problem, present nonlinear extensions, and discuss relations to compressed sensing. Our experiments using facial images, texture patches, and images of object categories suggest that the approach can improve our ability to recover meaningful structure in many classes of signals.
Dimensionality Reduction with Subspace Structure Preservation
Modeling data as being sampled from a union of independent subspaces has been widely applied to a number of real world applications. However, dimensionality reduction approaches that theoretically preserve this independence assumption have not been well studied. Our key contribution is to show that 2K projection vectors are sufficient for the independence preservation of any K class data sampled from a union of independent subspaces. It is this non-trivial observation that we use for designing our dimensionality reduction technique. In this paper, we propose a novel dimensionality reduction algorithm that theoretically preserves this structure for a given dataset. We support our theoretical analysis with empirical results on both synthetic and real world data achieving state-of-the-art results compared to popular dimensionality reduction techniques.
A Normative Theory of Adaptive Dimensionality Reduction in Neural Networks
To make sense of the world our brains must analyze high-dimensional datasets streamed by our sensory organs. Because such analysis begins with dimensionality reduction, modeling early sensory processing requires biologically plausible online dimensionality reduction algorithms. Recently, we derived such an algorithm, termed similarity matching, from a Multidimensional Scaling (MDS) objective function. However, in the existing algorithm, the number of output dimensions is set a priori by the number of output neurons and cannot be changed. Because the number of informative dimensions in sensory inputs is variable there is a need for adaptive dimensionality reduction.
Dimensionality Reduction of Massive Sparse Datasets Using Coresets
In this paper we present a practical solution with performance guarantees to the problem of dimensionality reduction for very large scale sparse matrices. We show applications of our approach to computing the Principle Component Analysis (PCA) of any n d matrix, using one pass over the stream of its rows. Our solution uses coresets: a scaled subset of the n rows that approximates their sum of squared distances to every k-dimensional affine subspace. An open theoretical problem has been to compute such a coreset that is independent of both n and d. An open practical problem has been to compute a non-trivial approximation to the PCA of very large but sparse databases such as the Wikipedia document-term matrix in a reasonable time. We answer both of these questions affirmatively. Our main technical result is a new framework for deterministic coreset constructions based on a reduction to the problem of counting items in a stream.
Large Margin Discriminant Dimensionality Reduction in Prediction Space Mohammad Saberian Jose Costa Pereira Netflix
In this paper we establish a duality between boosting and SVM, and use this to derive a novel discriminant dimensionality reduction algorithm. In particular, using the multiclass formulation of boosting and SVM we note that both use a combination of mapping and linear classification to maximize the multiclass margin. In SVM this is implemented using a pre-defined mapping (induced by the kernel) and optimizing the linear classifiers. In boosting the linear classifiers are pre-defined and the mapping (predictor) is learned through a combination of weak learners. We argue that the intermediate mapping, i.e. boosting predictor, is preserving the discriminant aspects of the data and that by controlling the dimension of this mapping it is possible to obtain discriminant low dimensional representations for the data. We use the aforementioned duality and propose a new method, Large Margin Discriminant Dimensionality Reduction (LADDER) that jointly learns the mapping and the linear classifiers in an efficient manner. This leads to a data-driven mapping which can embed data into any number of dimensions. Experimental results show that this embedding can significantly improve performance on tasks such as hashing and image/scene classification.
DiffRed: Dimensionality Reduction guided by stable rank
Shukla, Prarabdh, Gupta, Gagan Raj, Dutta, Kunal
In this work, we propose a novel dimensionality reduction technique, DiffRed, which first projects the data matrix, A, along first $k_1$ principal components and the residual matrix $A^{*}$ (left after subtracting its $k_1$-rank approximation) along $k_2$ Gaussian random vectors. We evaluate M1, the distortion of mean-squared pair-wise distance, and Stress, the normalized value of RMS of distortion of the pairwise distances. We rigorously prove that DiffRed achieves a general upper bound of $O\left(\sqrt{\frac{1-p}{k_2}}\right)$ on Stress and $O\left(\frac{(1-p)}{\sqrt{k_2*\rho(A^{*})}}\right)$ on M1 where $p$ is the fraction of variance explained by the first $k_1$ principal components and $\rho(A^{*})$ is the stable rank of $A^{*}$. These bounds are tighter than the currently known results for Random maps. Our extensive experiments on a variety of real-world datasets demonstrate that DiffRed achieves near zero M1 and much lower values of Stress as compared to the well-known dimensionality reduction techniques. In particular, DiffRed can map a 6 million dimensional dataset to 10 dimensions with 54% lower Stress than PCA.
Exploring the Influence of Dimensionality Reduction on Anomaly Detection Performance in Multivariate Time Series
This paper presents an extensive empirical study on the integration of dimensionality reduction techniques with advanced unsupervised time series anomaly detection models, focusing on the MUTANT and Anomaly-Transformer models. The study involves a comprehensive evaluation across three different datasets: MSL, SMAP, and SWaT. Each dataset poses unique challenges, allowing for a robust assessment of the models' capabilities in varied contexts. The dimensionality reduction techniques examined include PCA, UMAP, Random Projection, and t-SNE, each offering distinct advantages in simplifying high-dimensional data. Our findings reveal that dimensionality reduction not only aids in reducing computational complexity but also significantly enhances anomaly detection performance in certain scenarios. Moreover, a remarkable reduction in training times was observed, with reductions by approximately 300\% and 650\% when dimensionality was halved and minimized to the lowest dimensions, respectively. This efficiency gain underscores the dual benefit of dimensionality reduction in both performance enhancement and operational efficiency. The MUTANT model exhibits notable adaptability, especially with UMAP reduction, while the Anomaly-Transformer demonstrates versatility across various reduction techniques. These insights provide a deeper understanding of the synergistic effects of dimensionality reduction and anomaly detection, contributing valuable perspectives to the field of time series analysis. The study underscores the importance of selecting appropriate dimensionality reduction strategies based on specific model requirements and dataset characteristics, paving the way for more efficient, accurate, and scalable solutions in anomaly detection.
Dimensionality Reduction and Prior Knowledge in E-Set Recognition
It is well known that when an automatic learning algorithm is applied to a fixed corpus of data, the size of the corpus places an upper bound on the number of degrees of freedom that the model can contain if it is to generalize well. Because the amount of hardware in a neural network typically increases with the dimensionality of its inputs, it can be challenging to build a high-performance network for classifying large input patterns. In this paper, several techniques for addressing this problem are discussed in the context of an isolated word recognition task.
DimVis: Interpreting Visual Clusters in Dimensionality Reduction With Explainable Boosting Machine
Salmanian, Parisa, Chatzimparmpas, Angelos, Karaca, Ali Can, Martins, Rafael M.
Dimensionality Reduction (DR) techniques such as t-SNE and UMAP are popular for transforming complex datasets into simpler visual representations. However, while effective in uncovering general dataset patterns, these methods may introduce artifacts and suffer from interpretability issues. This paper presents DimVis, a visualization tool that employs supervised Explainable Boosting Machine (EBM) models (trained on user-selected data of interest) as an interpretation assistant for DR projections. Our tool facilitates high-dimensional data analysis by providing an interpretation of feature relevance in visual clusters through interactive exploration of UMAP projections. Specifically, DimVis uses a contrastive EBM model that is trained in real time to differentiate between the data inside and outside a cluster of interest. Taking advantage of the inherent explainable nature of the EBM, we then use this model to interpret the cluster itself via single and pairwise feature comparisons in a ranking based on the EBM model's feature importance. The applicability and effectiveness of DimVis are demonstrated through two use cases involving real-world datasets, and we also discuss the limitations and potential directions for future research.
Dimensionality reduction can be used as a surrogate model for high-dimensional forward uncertainty quantification
Kim, Jungho, Yi, Sang-ri, Wang, Ziqi
We introduce a method to construct a stochastic surrogate model from the results of dimensionality reduction in forward uncertainty quantification. The hypothesis is that the high-dimensional input augmented by the output of a computational model admits a low-dimensional representation. This assumption can be met by numerous uncertainty quantification applications with physics-based computational models. The proposed approach differs from a sequential application of dimensionality reduction followed by surrogate modeling, as we "extract" a surrogate model from the results of dimensionality reduction in the input-output space. This feature becomes desirable when the input space is genuinely high-dimensional. The proposed method also diverges from the Probabilistic Learning on Manifold, as a reconstruction mapping from the feature space to the input-output space is circumvented. The final product of the proposed method is a stochastic simulator that propagates a deterministic input into a stochastic output, preserving the convenience of a sequential "dimensionality reduction + Gaussian process regression" approach while overcoming some of its limitations. The proposed method is demonstrated through two uncertainty quantification problems characterized by high-dimensional input uncertainties.