Detecting underlying clusters from large-scale data plays a central role in machine learning research. In this paper, we attempt to tackle clustering problems for complex data of multiple distributions and large multi-scales. To this end, we develop an algorithm named Zeta $l$-links, or Zell which consists of two parts: Zeta merging with a similarity graph and an initial set of small clusters derived from local $l$-links of the graph. More specifically, we propose to structurize a cluster using cycles in the associated subgraph. A mathematical tool, Zeta function of a graph, is introduced for the integration of all cycles, leading to a structural descriptor of the cluster in determinantal form. The popularity character of the cluster is conceptualized as the global fusion of variations of the structural descriptor by means of the leave-one-out strategy in the cluster. Zeta merging proceeds, in the agglomerative fashion, according to the maximum incremental popularity among all pairwise clusters. Experiments on toy data, real imagery data, and real sensory data show the promising performance of Zell. The $98.1\%$ accuracy, in the sense of the normalized mutual information, is obtained on the FRGC face data of 16028 samples and 466 facial clusters. The MATLAB codes of Zell will be made publicly available for peer evaluation.

We present a new method for clustering based on compression. The method doesn't use subject-specific features or background knowledge, and works as follows: First, we determine a universal similarity distance, the normalized compression distance or NCD, computed from the lengths of compressed data files (singly and in pairwise concatenation). Second, we apply a hierarchical clustering method. The NCD is universal in that it is not restricted to a specific application area, and works across application area boundaries. A theoretical precursor, the normalized information distance, co-developed by one of the authors, is provably optimal but uses the non-computable notion of Kolmogorov complexity. We propose precise notions of similarity metric, normal compressor, and show that the NCD based on a normal compressor is a similarity metric that approximates universality. To extract a hierarchy of clusters from the distance matrix, we determine a dendrogram (binary tree) by a new quartet method and a fast heuristic to implement it. The method is implemented and available as public software, and is robust under choice of different compressors. To substantiate our claims of universality and robustness, we report evidence of successful application in areas as diverse as genomics, virology, languages, literature, music, handwritten digits, astronomy, and combinations of objects from completely different domains, using statistical, dictionary, and block sorting compressors. In genomics we presented new evidence for major questions in Mammalian evolution, based on whole-mitochondrial genomic analysis: the Eutherian orders and the Marsupionta hypothesis against the Theria hypothesis.

The k -modes algorithm [1] extends the k -means paradigm to cluster categorical data by using (1) a simple matching dissimilarity measure for categorical objects, (2) modes instead of means for clusters, and (3) a frequency-based method to update modes in the k -means fashion to minimize the cost function of clustering. Because the k -modes algorithm uses the same clustering process as k -means, it preserves the efficiency of the k -means algorithm. Although the k -modes algorithm is very efficient, it suffers the problem that the clustering results are sensitive to the selection of the initial points. Hence, a better initial points selection procedure would improve the reliability and accuracy of clustering results. To that end, an iterative initial-points refinement algorithm for k -modes clustering has been presented in [2]. As shown in [2], the new initialization pr ocedure greatly improves the reliability and accuracy of final clustering results. Despite the su ccess of Ref. [2], the following observations motivate us to further pursue other alternative initialization methods.

We present a tool that, from automatically recognised names, tries to infer inter-person relations in order to present associated people on maps. Based on an in-house Named Entity Recognition tool, applied on clusters of an average of 15,000 news articles per day, in 15 different languages, we build a knowledge base that allows extracting statistical co-occurrences of persons and visualising them on a per-person page or in various graphs.

We are presenting a text analysis tool set that allows analysts in various fields to sieve through large collections of multilingual news items quickly and to find information that is of relevance to them. For a given document collection, the tool set automatically clusters the texts into groups of similar articles, extracts names of places, people and organisations, lists the user-defined specialist terms found, links clusters and entities, and generates hyperlinks. Through its daily news analysis operating on thousands of articles per day, the tool also learns relationships between people and other entities. The fully functional prototype system allows users to explore and navigate multilingual document collections across languages and time.

In this paper, we study clustering with respect to the k-modes objective function, a natural formulation of clustering for categorical data. One of the main contributions of this paper is to establish the connection between k-modes and k-median, i.e., the optimum of k-median is at most twice the optimum of k-modes for the same categorical data clustering problem. Based on this observation, we derive a deterministic algorithm that achieves an approximation factor of 2. Furthermore, we prove that the distance measure in k-modes defines a metric. Hence, we are able to extend existing approximation algorithms for metric k-median to k-modes. Empirical results verify the superiority of our method.

Clustering categorical data is an integral part of data mining and has attracted much attention recently. In this paper, we present k-ANMI, a new efficient algorithm for clustering categorical data. The k-ANMI algorithm works in a way that is similar to the popular k-means algorithm, and the goodness of clustering in each step is evaluated using a mutual information based criterion (namely, Average Normalized Mutual Information-ANMI) borrowed from cluster ensemble. Experimental results on real datasets show that k-ANMI algorithm is competitive with those state-of-art categorical data clustering algorithms with respect to clustering accuracy.

Categorical data clustering is an important research problem in pattern recognition and data mining. The k -modes algorithm [1] extends the k -means paradigm to cluster categorical data by using (1) a simple matching dissimilarity measure for categorical objects, (2) modes instead of means for clusters, and (3) a frequency-based method to update modes in the k -means fashion to minimize the cost function of clustering. The k -modes algorithm is widely used in real world applications due to its efficiency in dealing with large categorical database. In standard k -modes algorithm, a simple matching similarity measure is used, in which the distance is either 0 or 1. Such simple matching dissimilarity measure doesn't consider the implicit similarity relationship embedded in categorical values, which will result in a weaker intra-cluster similarity by allocating less similar objects to the cluster. To illustrate this fact, let's consider the following example shown in Fig.1. Example 1: In this artificial example, the dataset is described with 3 categorical attributes A1, A2,and A3, and there are two clusters with their modes. Assuming that we have to allocate a data object Y = [a, p, w] to either cluster 1 or cluster 2. According to the k -modes algorithm, we can assign Y to either cluster 1 or cluster 2 since these two clusters have the same mode. However, from the viewpoint of intra-cluster simila rity, it is more desirable to allocate Y to cluster 1.

This paper focuses on obtaining clustering information about a distribution from its i.i.d. samples. We develop theoretical results to understand and use clustering information contained in the eigenvectors of data adjacency matrices based on a radial kernel function with a sufficiently fast tail decay. In particular, we provide population analyses to gain insights into which eigenvectors should be used and when the clustering information for the distribution can be recovered from the sample. We learn that a fixed number of top eigenvectors might at the same time contain redundant clustering information and miss relevant clustering information. We use this insight to design the data spectroscopic clustering (DaSpec) algorithm that utilizes properly selected eigenvectors to determine the number of clusters automatically and to group the data accordingly. Our findings extend the intuitions underlying existing spectral techniques such as spectral clustering and Kernel Principal Components Analysis, and provide new understanding into their usability and modes of failure. Simulation studies and experiments on real-world data are conducted to show the potential of our algorithm. In particular, DaSpec is found to handle unbalanced groups and recover clusters of different shapes better than the competing methods.

We propose a generative model for high dimensional data consisting of intrinsically low dimensional clusters that are noisily sampled. The proposed model is a mixture of probabilistic principal surfaces (MiPPS) optimized using expectation maximization. We use a Bayesian prior on the model parameters to maximize the corresponding marginal likelihood. We also show empirically that this optimization can be biased towards a good local optimum by using our prior intuition to guide the initialization phase The proposed unsupervised algorithm naturally handles cases where the data lies on multiple connected components of a single manifold and where the component manifolds intersect. In addition to clustering, we learn a functional model for the underlying structure of each component cluster as a parameterized hyper-surface in ambient noise.This model is used to learn a global embedding that we use for visualization of the entire dataset. We demonstrate the performance of MiPPS in separating and visualizing land cover types in a hyperspectral dataset.