Clustering
Hybrid Density- and Partition-based Clustering Algorithm for Data with Mixed-type Variables
Wang, Shu, Yabes, Jonathan G., Chang, Chung-Chou H.
Clustering is an essential technique for discovering patterns in data. The steady increase in amount and complexity of data over the years led to improvements and development of new clustering algorithms. However, algorithms that can cluster data with mixed variable types (continuous and categorical) remain limited, despite the abundance of data with mixed types particularly in the medical field. Among existing methods for mixed data, some posit unverifiable distributional assumptions or that the contributions of different variable types are not well balanced. We propose a two-step hybrid density- and partition-based algorithm (HyDaP) that can detect clusters after variables selection. The first step involves both density-based and partition-based algorithms to identify the data structure formed by continuous variables and recognize the important variables for clustering; the second step involves partition-based algorithm together with a novel dissimilarity measure we designed for mixed data to obtain clustering results. Simulations across various scenarios and data structures were conducted to examine the performance of the HyDaP algorithm compared to commonly used methods. We also applied the HyDaP algorithm on electronic health records to identify sepsis phenotypes.
Is a Single Embedding Enough? Learning Node Representations that Capture Multiple Social Contexts
Epasto, Alessandro, Perozzi, Bryan
Recent interest in graph embedding methods has focused on learning a single representation for each node in the graph. But can nodes really be best described by a single vector representation? In this work, we propose a method for learning multiple representations of the nodes in a graph (e.g., the users of a social network). Based on a principled decomposition of the ego-network, each representation encodes the role of the node in a different local community in which the nodes participate. These representations allow for improved reconstruction of the nuanced relationships that occur in the graph -- a phenomenon that we illustrate through state-of-the-art results on link prediction tasks on a variety of graphs, reducing the error by up to $90\%$. In addition, we show that these embeddings allow for effective visual analysis of the learned community structure.
Fast communication-efficient spectral clustering over distributed data
Yan, Donghui, Wang, Yingjie, Wang, Jin, Wu, Guodong, Wang, Honggang
The last decades have seen a surge of interests in distributed computing thanks to advances in clustered computing and big data technology. Existing distributed algorithms typically assume {\it all the data are already in one place}, and divide the data and conquer on multiple machines. However, it is increasingly often that the data are located at a number of distributed sites, and one wishes to compute over all the data with low communication overhead. For spectral clustering, we propose a novel framework that enables its computation over such distributed data, with "minimal" communications while a major speedup in computation. The loss in accuracy is negligible compared to the non-distributed setting. Our approach allows local parallel computing at where the data are located, thus turns the distributed nature of the data into a blessing; the speedup is most substantial when the data are evenly distributed across sites. Experiments on synthetic and large UC Irvine datasets show almost no loss in accuracy with our approach while about 2x speedup under various settings with two distributed sites. As the transmitted data need not be in their original form, our framework readily addresses the privacy concern for data sharing in distributed computing.
Deep Discriminative Clustering Analysis
Chang, Jianlong, Guo, Yiwen, Wang, Lingfeng, Meng, Gaofeng, Xiang, Shiming, Pan, Chunhong
Traditional clustering methods often perform clustering with low-level indiscriminative representations and ignore relationships between patterns, resulting in slight achievements in the era of deep learning. To handle this problem, we develop Deep Discriminative Clustering (DDC) that models the clustering task by investigating relationships between patterns with a deep neural network. Technically, a global constraint is introduced to adaptively estimate the relationships, and a local constraint is developed to endow the network with the capability of learning high-level discriminative representations. By iteratively training the network and estimating the relationships in a mini-batch manner, DDC theoretically converges and the trained network enables to generate a group of discriminative representations that can be treated as clustering centers for straightway clustering. Extensive experiments strongly demonstrate that DDC outperforms current methods on eight image, text and audio datasets concurrently.
A Survey of Adaptive Resonance Theory Neural Network Models for Engineering Applications
da Silva, Leonardo Enzo Brito, Elnabarawy, Islam, Wunsch, Donald C. II
This survey samples from the ever-growing family of adaptive resonance theory (ART) neural network models used to perform the three primary machine learning modalities, namely, unsupervised, supervised and reinforcement learning. It comprises a representative list from classic to modern ART models, thereby painting a general picture of the architectures developed by researchers over the past 30 years. The learning dynamics of these ART models are briefly described, and their distinctive characteristics such as code representation, long-term memory and corresponding geometric interpretation are discussed. Useful engineering properties of ART (speed, configurability, explainability, parallelization and hardware implementation) are examined along with current challenges. Finally, a compilation of online software libraries is provided. It is expected that this overview will be helpful to new and seasoned ART researchers.
Restricted Connection Orthogonal Matching Pursuit For Sparse Subspace Clustering
Zhu, Wenqi, Zhu, Yuesheng, Zhong, Li, Yang, Shuai
Sparse Subspace Clustering (SSC) is one of the most popular methods for clustering data points into their underlying subspaces. However, SSC may suffer from heavy computational burden. Orthogonal Matching Pursuit applied on SSC accelerates the computation but the trade-off is the loss of clustering accuracy. In this paper, we propose a noise-robust algorithm, Restricted Connection Orthogonal Matching Pursuit for Sparse Subspace Clustering (RCOMP-SSC), to improve the clustering accuracy and maintain the low computational time by restricting the number of connections of each data point during the iteration of OMP. Also, we develop a framework of control matrix to realize RCOMP-SCC. And the framework is scalable for other data point selection strategies. Our analysis and experiments on synthetic data and two real-world databases (EYaleB & Usps) demonstrate the superiority of our algorithm compared with other clustering methods in terms of accuracy and computational time.
Factor Analysis in Fault Diagnostics Using Random Forest
Amruthnath, Nagdev, Gupta, Tarun
Factor analysis or sometimes referred to as variable analysis has been extensively used in classification problems for identifying specific factors that are significant to particular classes. This type of analysis has been widely used in application such as customer segmentation, medical research, network traffic, image, and video classification. Today, factor analysis is prominently being used in fault diagnosis of machines to identify the significant factors and to study the root cause of a specific machine fault. The advantage of performing factor analysis in machine maintenance is to perform prescriptive analysis (helps answer what actions to take?) and preemptive analysis (helps answer how to eliminate the failure mode?). In this paper, a real case of an industrial rotating machine was considered where vibration and ambient temperature data was collected for monitoring the health of the machine. Gaussian mixture model-based clustering was used to cluster the data into significant groups, and spectrum analysis was used to diagnose each cluster to a specific state of the machine. The significant features that attribute to a particular mode of the machine were identified by using the random forest classification model. The significant features for specific modes of the machine were used to conclude that the clusters generated are distinct and have a unique set of significant features.
Investigation of Initialization Strategies for the Multiple Instance Adaptive Cosine Estimator
Bocinsky, James, McCurley, Connor, Shats, Daniel, Zare, Alina
Sensors which use electromagnetic induction (EMI) to excite a response in conducting bodies have long been investigated for subsurface explosive hazard detection. In particular, EMI sensors have been used to discriminate between different types of objects, and to detect objects with low metal content. One successful, previously investigated approach is the Multiple Instance Adaptive Cosine Estimator (MI-ACE). In this paper, a number of new initialization techniques for MI-ACE are proposed and evaluated using their respective performance and speed. The cross validated learned signatures, as well as learned background statistics, are used with Adaptive Cosine Estimator (ACE) to generate confidence maps, which are clustered into alarms. Alarms are scored against a ground truth and the initialization approaches are compared.
Deep Spectral Clustering using Dual Autoencoder Network
Yang, Xu, Deng, Cheng, Zheng, Feng, Yan, Junchi, Liu, Wei
The clustering methods have recently absorbed even-increasing attention in learning and vision. Deep clustering combines embedding and clustering together to obtain optimal embedding subspace for clustering, which can be more effective compared with conventional clustering methods. In this paper, we propose a joint learning framework for discriminative embedding and spectral clustering. We first devise a dual autoencoder network, which enforces the reconstruction constraint for the latent representations and their noisy versions, to embed the inputs into a latent space for clustering. As such the learned latent representations can be more robust to noise. Then the mutual information estimation is utilized to provide more discriminative information from the inputs. Furthermore, a deep spectral clustering method is applied to embed the latent representations into the eigenspace and subsequently clusters them, which can fully exploit the relationship between inputs to achieve optimal clustering results. Experimental results on benchmark datasets show that our method can significantly outperform state-of-the-art clustering approaches.
Optimal Clustering Framework for Hyperspectral Band Selection
Wang, Qi, Zhang, Fahong, Li, Xuelong
Band selection, by choosing a set of representative bands in hyperspectral image (HSI), is an effective method to reduce the redundant information without compromising the original contents. Recently, various unsupervised band selection methods have been proposed, but most of them are based on approximation algorithms which can only obtain suboptimal solutions toward a specific objective function. This paper focuses on clustering-based band selection, and proposes a new framework to solve the above dilemma, claiming the following contributions: 1) An optimal clustering framework (OCF), which can obtain the optimal clustering result for a particular form of objective function under a reasonable constraint. 2) A rank on clusters strategy (RCS), which provides an effective criterion to select bands on existing clustering structure. 3) An automatic method to determine the number of the required bands, which can better evaluate the distinctive information produced by certain number of bands. In experiments, the proposed algorithm is compared to some state-of-the-art competitors. According to the experimental results, the proposed algorithm is robust and significantly outperform the other methods on various data sets.