Accuracy
Contrastive Language Prompting to Ease False Positives in Medical Anomaly Detection
Park, YeongHyeon, Kim, Myung Jin, Kim, Hyeong Seok
A pre-trained visual-language model, contrastive language-image pre-training (CLIP), successfully accomplishes various downstream tasks with text prompts, such as finding images or localizing regions within the image. Despite CLIP's strong multi-modal data capabilities, it remains limited in specialized environments, such as medical applications. For this purpose, many CLIP variants-i.e., BioMedCLIP, and MedCLIP-SAMv2-have emerged, but false positives related to normal regions persist. Thus, we aim to present a simple yet important goal of reducing false positives in medical anomaly detection. We introduce a Contrastive LAnguage Prompting (CLAP) method that leverages both positive and negative text prompts. This straightforward approach identifies potential lesion regions by visual attention to the positive prompts in the given image. To reduce false positives, we attenuate attention on normal regions using negative prompts. Extensive experiments with the BMAD dataset, including six biomedical benchmarks, demonstrate that CLAP method enhances anomaly detection performance. Our future plans include developing an automated fine prompting method for more practical usage.
Evaluating Detection Thresholds: The Impact of False Positives and Negatives on Super-Resolution Ultrasound Localization Microscopy
Gharamaleki, Sepideh K., Helfield, Brandon, Rivaz, Hassan
Super-resolution ultrasound imaging with ultrasound localization microscopy (ULM) offers a high-resolution view of microvascular structures. Yet, ULM image quality heavily relies on precise microbubble (MB) detection. Despite the crucial role of localization algorithms, there has been limited focus on the practical pitfalls in MB detection tasks such as setting the detection threshold. This study examines how False Positives (FPs) and False Negatives (FNs) affect ULM image quality by systematically adding controlled detection errors to simulated data. Results indicate that while both FP and FN rates impact Peak Signal-to-Noise Ratio (PSNR) similarly, increasing FP rates from 0\% to 20\% decreases Structural Similarity Index (SSIM) by 7\%, whereas same FN rates cause a greater drop of around 45\%. Moreover, dense MB regions are more resilient to detection errors, while sparse regions show high sensitivity, showcasing the need for robust MB detection frameworks to enhance super-resolution imaging.
LoRA-BERT: a Natural Language Processing Model for Robust and Accurate Prediction of long non-coding RNAs
Jeon, Nicholas, Qian, Xiaoning, SaidyKhan, Lamin, de Figueiredo, Paul, Yoon, Byung-Jun
Long non-coding RNAs (lncRNAs) serve as crucial regulators in numerous biological processes. Although they share sequence similarities with messenger RNAs (mRNAs), lncRNAs perform entirely different roles, providing new avenues for biological research. The emergence of next-generation sequencing technologies has greatly advanced the detection and identification of lncRNA transcripts and deep learning-based approaches have been introduced to classify long non-coding RNAs (lncRNAs). These advanced methods have significantly enhanced the efficiency of identifying lncRNAs. However, many of these methods are devoid of robustness and accuracy due to the extended length of the sequences involved. To tackle this issue, we have introduced a novel pre-trained bidirectional encoder representation called LoRA-BERT. LoRA-BERT is designed to capture the importance of nucleotide-level information during sequence classification, leading to more robust and satisfactory outcomes. In a comprehensive comparison with commonly used sequence prediction tools, we have demonstrated that LoRA-BERT outperforms them in terms of accuracy and efficiency. Our results indicate that, when utilizing the transformer model, LoRA-BERT achieves state-of-the-art performance in predicting both lncRNAs and mRNAs for human and mouse species. Through the utilization of LoRA-BERT, we acquire valuable insights into the traits of lncRNAs and mRNAs, offering the potential to aid in the comprehension and detection of diseases linked to lncRNAs in humans.
Optimized Quality of Service prediction in FSO Links over South Africa using Ensemble Learning
Adebusola, S. O., Owolawi, P. A., Ojo, J. S., Maswikaneng, P. S.
Fibre optic communication system is expected to increase exponentially in terms of application due to the numerous advantages over copper wires. The optical network evolution presents several advantages such as over long-distance, low-power requirement, higher carrying capacity and high bandwidth among others Such network bandwidth surpasses methods of transmission that include copper cables and microwaves. Despite these benefits, free-space optical communications are severely impacted by harsh weather situations like mist, precipitation, blizzard, fume, soil, and drizzle debris in the atmosphere, all of which have an impact on the Quality of Service (QoS) rendered by the systems. The primary goal of this article is to optimize the QoS using the ensemble learning models Random Forest, ADaBoost Regression, Stacking Regression, Gradient Boost Regression, and Multilayer Neural Network. To accomplish the stated goal, meteorological data, visibility, wind speed, and altitude were obtained from the South Africa Weather Services archive during a ten-year period (2010 to 2019) at four different locations: Polokwane, Kimberley, Bloemfontein, and George. We estimated the data rate, power received, fog-induced attenuation, bit error rate and power penalty using the collected and processed data. The RMSE and R-squared values of the model across all the study locations, Polokwane, Kimberley, Bloemfontein, and George, are 0.0073 and 0.9951, 0.0065 and 0.9998, 0.0060 and 0.9941, and 0.0032 and 0.9906, respectively. The result showed that using ensemble learning techniques in transmission modeling can significantly enhance service quality and meet customer service level agreements and ensemble method was successful in efficiently optimizing the signal to noise ratio, which in turn enhanced the QoS at the point of reception.
Enhancing Phishing Detection through Feature Importance Analysis and Explainable AI: A Comparative Study of CatBoost, XGBoost, and EBM Models
Fajar, Abdullah, Yazid, Setiadi, Budi, Indra
Phishing attacks remain a persistent threat to online security, demanding robust detection methods. This study investigates the use of machine learning to identify phishing URLs, emphasizing the crucial role of feature selection and model interpretability for improved performance. Employing Recursive Feature Elimination, the research pinpointed key features like "length_url," "time_domain_activation" and "Page_rank" as strong indicators of phishing attempts. The study evaluated various algorithms, including CatBoost, XGBoost, and Explainable Boosting Machine, assessing their robustness and scalability. XGBoost emerged as highly efficient in terms of runtime, making it well-suited for large datasets. CatBoost, on the other hand, demonstrated resilience by maintaining high accuracy even with reduced features. To enhance transparency and trustworthiness, Explainable AI techniques, such as SHAP, were employed to provide insights into feature importance. The study's findings highlight that effective feature selection and model interpretability can significantly bolster phishing detection systems, paving the way for more efficient and adaptable defenses against evolving cyber threats
1-800-SHARED-TASKS @ NLU of Devanagari Script Languages: Detection of Language, Hate Speech, and Targets using LLMs
Purbey, Jebish, Pullakhandam, Siddartha, Mehreen, Kanwal, Arham, Muhammad, Sharma, Drishti, Srivastava, Ashay, Kadiyala, Ram Mohan Rao
This paper presents a detailed system description of our entry for the CHiPSAL 2025 shared task, focusing on language detection, hate speech identification, and target detection in Devanagari script languages. We experimented with a combination of large language models and their ensembles, including MuRIL, IndicBERT, and Gemma-2, and leveraged unique techniques like focal loss to address challenges in the natural understanding of Devanagari languages, such as multilingual processing and class imbalance. Our approach achieved competitive results across all tasks: F1 of 0.9980, 0.7652, and 0.6804 for Sub-tasks A, B, and C respectively. This work provides insights into the effectiveness of transformer models in tasks with domain-specific and linguistic challenges, as well as areas for potential improvement in future iterations.
Predicting ionic conductivity in solids from the machine-learned potential energy landscape
Maevskiy, Artem, Carvalho, Alexandra, Sataev, Emil, Turchyna, Volha, Noori, Keian, Rodin, Aleksandr, Neto, A. H. Castro, Ustyuzhanin, Andrey
Discovering new superionic materials is essential for advancing solid-state batteries, which offer improved energy density and safety compared to the traditional lithium-ion batteries with liquid electrolytes. Conventional computational methods for identifying such materials are resource-intensive and not easily scalable. Recently, universal interatomic potential models have been developed using equivariant graph neural networks. These models are trained on extensive datasets of first-principles force and energy calculations. One can achieve significant computational advantages by leveraging them as the foundation for traditional methods of assessing the ionic conductivity, such as molecular dynamics or nudged elastic band techniques. However, the generalization error from model inference on diverse atomic structures arising in such calculations can compromise the reliability of the results. In this work, we propose an approach for the quick and reliable evaluation of ionic conductivity through the analysis of a universal interatomic potential. Our method incorporates a set of heuristic structure descriptors that effectively employ the rich knowledge of the underlying model while requiring minimal generalization capabilities. Using our descriptors, we rank lithium-containing materials in the Materials Project database according to their expected ionic conductivity. Eight out of the ten highest-ranked materials are confirmed to be superionic at room temperature in first-principles calculations. Notably, our method achieves a speed-up factor of approximately 50 compared to molecular dynamics driven by a machine-learning potential, and is at least 3,000 times faster compared to first-principles molecular dynamics.
Learning from Feedback: Semantic Enhancement for Object SLAM Using Foundation Models
Hong, Jungseok, Choi, Ran, Leonard, John J.
Semantic Simultaneous Localization and Mapping (SLAM) systems struggle to map semantically similar objects in close proximity, especially in cluttered indoor environments. We introduce Semantic Enhancement for Object SLAM (SEO-SLAM), a novel SLAM system that leverages Vision-Language Models (VLMs) and Multimodal Large Language Models (MLLMs) to enhance object-level semantic mapping in such environments. SEO-SLAM tackles existing challenges by (1) generating more specific and descriptive open-vocabulary object labels using MLLMs, (2) simultaneously correcting factors causing erroneous landmarks, and (3) dynamically updating a multiclass confusion matrix to mitigate object detector biases. Our approach enables more precise distinctions between similar objects and maintains map coherence by reflecting scene changes through MLLM feedback. We evaluate SEO-SLAM on our challenging dataset, demonstrating enhanced accuracy and robustness in environments with multiple similar objects. Our system outperforms existing approaches in terms of landmark matching accuracy and semantic consistency. Results show the feedback from MLLM improves object-centric semantic mapping. Our dataset is publicly available at: jungseokhong.com/SEO-SLAM.
Causal-discovery-based root-cause analysis and its application in time-series prediction error diagnosis
Yokoyama, Hiroshi, Shingaki, Ryusei, Nishino, Kaneharu, Shimizu, Shohei, Pham, Thong
Recent rapid advancements of machine learning have greatly enhanced the accuracy of prediction models, but most models remain "black boxes", making prediction error diagnosis challenging, especially with outliers. This lack of transparency hinders trust and reliability in industrial applications. Heuristic attribution methods, while helpful, often fail to capture true causal relationships, leading to inaccurate error attributions. Various root-cause analysis methods have been developed using Shapley values, yet they typically require predefined causal graphs, limiting their applicability for prediction errors in machine learning models. To address these limitations, we introduce the Causal-Discovery-based Root-Cause Analysis (CD-RCA) method that estimates causal relationships between the prediction error and the explanatory variables, without needing a pre-defined causal graph. By simulating synthetic error data, CD-RCA can identify variable contributions to outliers in prediction errors by Shapley values. Extensive simulations show CD-RCA outperforms current heuristic attribution methods, and a sensitivity analysis reveals new patterns where Shapley values may misattribute errors, paving the way for more accurate error attribution methods.
Effect sizes as a statistical feature-selector-based learning to detect breast cancer
Masino, Nicolas, Quintero-Rincon, Antonio
Breast cancer detection is still an open research field, despite a tremendous effort devoted to work in this area. Effect size is a statistical concept that measures the strength of the relationship between two variables on a numeric scale. Feature selection is widely used to reduce the dimensionality of data by selecting only a subset of predictor variables to improve a learning model. In this work, an algorithm and experimental results demonstrate the feasibility of developing a statistical featureselector-based learning tool capable of reducing the data dimensionality using parametric effect size measures from features extracted from cell nuclei images. The SVM classifier with a linear kernel as a learning tool achieved an accuracy of over 90%. These excellent results suggest that the effect size is within the standards of the feature-selector methods. Keywords: Effect Size Cohen's d Standardized Mean Difference Feature selection Breast Cancer