Accuracy
Human-Machine Ritual: Synergic Performance through Real-Time Motion Recognition
Cai, Zhuodi, Xu, Ziyu, Pampin, Juan
We introduce a lightweight, real-time motion recognition system that enables synergic human-machine performance through wearable IMU sensor data, MiniRocket time-series classification, and responsive multimedia control. By mapping dancer-specific movement to sound through somatic memory and association, we propose an alternative approach to human-machine collaboration, one that preserves the expressive depth of the performing body while leveraging machine learning for attentive observation and responsiveness. We demonstrate that this human-centered design reliably supports high accuracy classification (<50 ms latency), offering a replicable framework to integrate dance-literate machines into creative, educational, and live performance contexts.
Interpretable Heart Disease Prediction via a Weighted Ensemble Model: A Large-Scale Study with SHAP and Surrogate Decision Trees
Hasnat, Md Abrar, Jobayer, Md, Shawon, Md. Mehedi Hasan, Alam, Md. Golam Rabiul
Cardiovascular disease (CVD) remains a critical global health concern, demanding reliable and interpretable predictive models for early risk assessment. This study presents a large-scale analysis using the Heart Disease Health Indicators Dataset, developing a strategically weighted ensemble model that combines tree-based methods (LightGBM, XGBoost) with a Convolutional Neural Network (CNN) to predict CVD risk. The model was trained on a preprocessed dataset of 229,781 patients where the inherent class imbalance was managed through strategic weighting and feature engineering enhanced the original 22 features to 25. The final ensemble achieves a statistically significant improvement over the best individual model, with a Test AUC of 0.8371 (p=0.003) and is particularly suited for screening with a high recall of 80.0%. To provide transparency and clinical interpretability, surrogate decision trees and SHapley Additive exPlanations (SHAP) are used. The proposed model delivers a combination of robust predictive performance and clinical transparency by blending diverse learning architectures and incorporating explainability through SHAP and surrogate decision trees, making it a strong candidate for real-world deployment in public health screening.
The Eigenvalues Entropy as a Classifier Evaluation Measure
Classification is a machine learning method used in many practical applications: text mining, handwritten character recognition, face recognition, pattern classification, scene labeling, computer vision, natural langage processing. A classifier prediction results and training set information are often used to get a contingency table which is used to quantify the method quality through an evaluation measure. Such measure, typically a numerical value, allows to choose a suitable method among several. Many evaluation measures available in the literature are less accurate for a dataset with imbalanced classes. In this paper, the eigenvalues entropy is used as an evaluation measure for a binary or a multi-class problem. For a binary problem, relations are given between the eigenvalues and some commonly used measures, the sensitivity, the specificity, the area under the operating receiver characteristic curve and the Gini index. A by-product result of this paper is an estimate of the confusion matrix to deal with the curse of the imbalanced classes. Various data examples are used to show the better performance of the proposed evaluation measure over the gold standard measures available in the literature.
AGNES: Adaptive Graph Neural Network and Dynamic Programming Hybrid Framework for Real-Time Nanopore Seed Chaining
Arafat, Jahidul, Poudel, Sanjaya
Nanopore sequencing enables real-time long-read DNA sequencing with reads exceeding 10 kilobases, but inherent error rates of 12-15 percent present significant computational challenges for read alignment. The critical seed chaining step must connect exact k-mer matches between reads and reference genomes while filtering spurious matches, yet state-of-the-art methods rely on fixed gap penalty functions unable to adapt to varying genomic contexts including tandem repeats and structural variants. This paper presents RawHash3, a hybrid framework combining graph neural networks with classical dynamic programming for adaptive seed chaining that maintains real-time performance while providing statistical guarantees. We formalize seed chaining as graph learning where seeds constitute nodes with 12-dimensional feature vectors and edges encode 8-dimensional spatial relationships including gap consistency. Our architecture employs three-layer EdgeConv GNN with confidence-based method selection that dynamically switches between learned guidance and algorithmic fallback. Comprehensive evaluation on 1,000 synthetic nanopore reads with 5,200 test seeds demonstrates RawHash3 achieves 99.94 percent precision and 40.07 percent recall, representing statistically significant 25.0 percent relative improvement over baseline with p less than 0.001. The system maintains median inference latency of 1.59ms meeting real-time constraints, while demonstrating superior robustness with 100 percent success rate under 20 percent label corruption versus baseline degradation to 30.3 percent. Cross-validation confirms stability establishing graph neural networks as viable approach for production genomics pipelines.
GRAM-DTI: adaptive multimodal representation learning for drug target interaction prediction
Jiang, Feng, Mollaysa, Amina, Ma, Hehuan, Mansi, Tommaso, Huang, Junzhou, Prakash, Mangal, Liao, Rui
Drug target interaction (DTI) prediction is a cornerstone of computational drug discovery, enabling rational design, repurposing, and mechanistic insights. While deep learning has advanced DTI modeling, existing approaches primarily rely on SMILES protein pairs and fail to exploit the rich multimodal information available for small molecules and proteins. We introduce GRAMDTI, a pretraining framework that integrates multimodal molecular and protein inputs into unified representations. GRAMDTI extends volume based contrastive learning to four modalities, capturing higher-order semantic alignment beyond conventional pairwise approaches. To handle modality informativeness, we propose adaptive modality dropout, dynamically regulating each modality's contribution during pre-training. Additionally, IC50 activity measurements, when available, are incorporated as weak supervision to ground representations in biologically meaningful interaction strengths. Experiments on four publicly available datasets demonstrate that GRAMDTI consistently outperforms state of the art baselines. Our results highlight the benefits of higher order multimodal alignment, adaptive modality utilization, and auxiliary supervision for robust and generalizable DTI prediction.
DIsoN: Decentralized Isolation Networks for Out-of-Distribution Detection in Medical Imaging
Wagner, Felix, Saha, Pramit, Anthony, Harry, Noble, J. Alison, Kamnitsas, Konstantinos
Safe deployment of machine learning (ML) models in safety-critical domains such as medical imaging requires detecting inputs with characteristics not seen during training, known as out-of-distribution (OOD) detection, to prevent unreliable predictions. Effective OOD detection after deployment could benefit from access to the training data, enabling direct comparison between test samples and the training data distribution to identify differences. State-of-the-art OOD detection methods, however, either discard the training data after deployment or assume that test samples and training data are centrally stored together, an assumption that rarely holds in real-world settings. This is because shipping the training data with the deployed model is usually impossible due to the size of training databases, as well as proprietary or privacy constraints. We introduce the Isolation Network, an OOD detection framework that quantifies the difficulty of separating a target test sample from the training data by solving a binary classification task. We then propose Decentralized Isolation Networks (DIsoN), which enables the comparison of training and test data when data-sharing is impossible, by exchanging only model parameters between the remote computational nodes of training and deployment. We further extend DIsoN with class-conditioning, comparing a target sample solely with training data of its predicted class. We evaluate DIsoN on four medical imaging datasets (dermatology, chest X-ray, breast ultrasound, histopathology) across 12 OOD detection tasks. DIsoN performs favorably against existing methods while respecting data-privacy. This decentralized OOD detection framework opens the way for a new type of service that ML developers could provide along with their models: providing remote, secure utilization of their training data for OOD detection services. Code: https://github.com/FelixWag/DIsoN
Toward Unifying Group Fairness Evaluation from a Sparsity Perspective
Sheng, Zhecheng, Zhang, Jiawei, Diao, Enmao
Ensuring algorithmic fairness remains a significant challenge in machine learning, particularly as models are increasingly applied across diverse domains. While numerous fairness criteria exist, they often lack generalizability across different machine learning problems. This paper examines the connections and differences among various sparsity measures in promoting fairness and proposes a unified sparsity-based framework for evaluating algorithmic fairness. The framework aligns with existing fairness criteria and demonstrates broad applicability to a wide range of machine learning tasks. We demonstrate the effectiveness of the proposed framework as an evaluation metric through extensive experiments on a variety of datasets and bias mitigation methods. This work provides a novel perspective to algorithmic fairness by framing it through the lens of sparsity and social equity, offering potential for broader impact on fairness research and applications.
Vision-Language Model-Based Semantic-Guided Imaging Biomarker for Lung Nodule Malignancy Prediction
Zhuang, Luoting, Tabatabaei, Seyed Mohammad Hossein, Salehi-Rad, Ramin, Tran, Linh M., Aberle, Denise R., Prosper, Ashley E., Hsu, William
Machine learning models have utilized semantic features, deep features, or both to assess lung nodule malignancy. However, their reliance on manual annotation during inference, limited interpretability, and sensitivity to imaging variations hinder their application in real-world clinical settings. Thus, this research aims to integrate semantic features derived from radiologists' assessments of nodules, guiding the model to learn clinically relevant, robust, and explainable imaging features for predicting lung cancer. We obtained 938 low-dose CT scans from the National Lung Screening Trial (NLST) with 1,261 nodules and semantic features. Additionally, the Lung Image Database Consortium dataset contains 1,018 CT scans, with 2,625 lesions annotated for nodule characteristics. Three external datasets were obtained from UCLA Health, the LUNGx Challenge, and the Duke Lung Cancer Screening. We fine-tuned a pretrained Contrastive Language-Image Pretraining (CLIP) model with a parameter-efficient fine-tuning approach to align imaging and semantic text features and predict the one-year lung cancer diagnosis. Our model outperformed state-of-the-art (SOTA) models in the NLST test set with an AUROC of 0.901 and AUPRC of 0.776. It also showed robust results in external datasets. Using CLIP, we also obtained predictions on semantic features through zero-shot inference, such as nodule margin (AUROC: 0.807), nodule consistency (0.812), and pleural attachment (0.840). Our approach surpasses the SOTA models in predicting lung cancer across datasets collected from diverse clinical settings, providing explainable outputs, aiding clinicians in comprehending the underlying meaning of model predictions. This approach also prevents the model from learning shortcuts and generalizes across clinical settings. The code is available at https://github.com/luotingzhuang/CLIP_nodule.
EL-MIA: Quantifying Membership Inference Risks of Sensitive Entities in LLMs
Satvaty, Ali, Verberne, Suzan, Turkmen, Fatih
Membership inference attacks (MIA) aim to infer whether a particular data point is part of the training dataset of a model. In this paper, we propose a new task in the context of LLM privacy: entity-level discovery of membership risk focused on sensitive information (PII, credit card numbers, etc). Existing methods for MIA can detect the presence of entire prompts or documents in the LLM training data, but they fail to capture risks at a finer granularity. We propose the ``EL-MIA'' framework for auditing entity-level membership risks in LLMs. We construct a benchmark dataset for the evaluation of MIA methods on this task. Using this benchmark, we conduct a systematic comparison of existing MIA techniques as well as two newly proposed methods. We provide a comprehensive analysis of the results, trying to explain the relation of the entity level MIA susceptability with the model scale, training epochs, and other surface level factors. Our findings reveal that existing MIA methods are limited when it comes to entity-level membership inference of the sensitive attributes, while this susceptibility can be outlined with relatively straightforward methods, highlighting the need for stronger adversaries to stress test the provided threat model.
MaGNet: A Mamba Dual-Hypergraph Network for Stock Prediction via Temporal-Causal and Global Relational Learning
Tan, Peilin, Shi, Chuanqi, Tu, Dian, Xie, Liang
Stock trend prediction is crucial for profitable trading strategies and portfolio management yet remains challenging due to market volatility, complex temporal dynamics and multifaceted inter-stock relationships. Existing methods struggle to effectively capture temporal dependencies and dynamic inter-stock interactions, often neglecting cross-sectional market influences, relying on static correlations, employing uniform treatments of nodes and edges, and conflating diverse relationships. This work introduces MaGNet, a novel Mamba dual-hyperGraph Network for stock prediction, integrating three key innovations: (1) a MAGE block, which leverages bidirectional Mamba with adaptive gating mechanisms for contextual temporal modeling and integrates a sparse Mixture-of-Experts layer to enable dynamic adaptation to diverse market conditions, alongside multi-head attention for capturing global dependencies; (2) Feature-wise and Stock-wise 2D Spatiotemporal Attention modules enable precise fusion of multivariate features and cross-stock dependencies, effectively enhancing informativeness while preserving intrinsic data structures, bridging temporal modeling with relational reasoning; and (3) a dual hypergraph framework consisting of the Temporal-Causal Hypergraph (TCH) that captures fine-grained causal dependencies with temporal constraints, and Global Probabilistic Hypergraph (GPH) that models market-wide patterns through soft hyperedge assignments and Jensen-Shannon Divergence weighting mechanism, jointly disentangling localized temporal influences from instantaneous global structures for multi-scale relational learning. Extensive experiments on six major stock indices demonstrate MaGNet outperforms state-of-the-art methods in both superior predictive performance and exceptional investment returns with robust risk management capabilities. Codes available at: https://github.com/PeilinTime/MaGNet.