Accuracy
Flexible, Model-Agnostic Method for Materials Data Extraction from Text Using General Purpose Language Models
Polak, Maciej P., Modi, Shrey, Latosinska, Anna, Zhang, Jinming, Wang, Ching-Wen, Wang, Shanonan, Hazra, Ayan Deep, Morgan, Dane
Accurate and comprehensive material databases extracted from research papers are critical for materials science and engineering but require significant human effort to develop. In this paper we present a simple method of extracting materials data from full texts of research papers suitable for quickly developing modest-sized databases. The method requires minimal to no coding, prior knowledge about the extracted property, or model training, and provides high recall and almost perfect precision in the resultant database. The method is fully automated except for one human-assisted step, which typically requires just a few hours of human labor. The method builds on top of natural language processing and large general language models but can work with almost any such model. The language models GPT-3/3.5, bart and DeBERTaV3 are evaluated here for comparison. We provide a detailed detailed analysis of the methods performance in extracting bulk modulus data, obtaining up to 90% precision at 96% recall, depending on the amount of human effort involved. We then demonstrate the methods broader effectiveness by developing a database of critical cooling rates for metallic glasses.
Liver Segmentation using Turbolift Learning for CT and Cone-beam C-arm Perfusion Imaging
Haseljiฤ, Hana, Chatterjee, Soumick, Frysch, Robert, Kulvait, Vojtฤch, Semshchikov, Vladimir, Hensen, Bennet, Wacker, Frank, Brรผsch, Inga, Werncke, Thomas, Speck, Oliver, Nรผrnberger, Andreas, Rose, Georg
Potentially it might also serve for diagnosing liver diseases. The experimental C-arm CBCTp Computed Tomography (CT) perfusion or CTp imaging is a scanning protocol of the liver consists of multiple bidirectional method that can be used for the diagnosis and treatment planning rotations with pauses in between (Datta et al., 2017), which, of liver tumours. C-arm cone-beam CT, referred to here in combined with slow rotation, results in a very limited number short as CBCT, on the other hand, can be advantageous during of projections. A simplified approach would be to reconstruct interventions as the acquisitions can be done without moving every rotation separately, the straightforward approach, the patient due to the availability of CBCT as a part of the interventional which can result in over or underestimation of perfusion parameters suites (Orth et al., 2008). It has been shown that (Haseljiฤ et al., 2021). Recent publications have shown CBCT perfusion maps of the brain would not be inferior to that model-based reconstruction and time separation technique the CT perfusion maps (Niu et al., 2016), and when CT perfusion (TST) could deal with poor temporal resolution (Montes and scans are acquired soon enough, it could the patient's Lauritsch, 2009; Neukirchen et al., 2010; Manhart et al., 2013; life (Powers et al., 2019). C-arm CBCT perfusion (CBCTp) Bannasch et al., 2018; Kulvait et al., 2022; Haseljiฤ et al., 2021, imaging of the liver could allow inspection and evaluation of 2022) and provide highly accurate liver perfusion maps.
Data Augmentation for Robust Character Detection in Fantasy Novels
Amalvy, Arthur, Labatut, Vincent, Dufour, Richard
Named Entity Recognition (NER) is a low-level task often used as a foundation for solving higher level NLP problems. In the context of character detection in novels, NER false negatives can be an issue as they possibly imply missing certain characters or relationships completely. In this article, we demonstrate that applying a straightforward data augmentation technique allows training a model achieving higher recall, at the cost of a certain amount of precision regarding ambiguous entities. We show that this decrease in precision can be mitigated by giving the model more local context, which resolves some of the ambiguities.
On Fairness and Stability: Is Estimator Variance a Friend or a Foe?
Khan, Falaah Arif, Herasymuk, Denys, Stoyanovich, Julia
The error of an estimator can be decomposed into a (statistical) bias term, a variance term, and an irreducible noise term. When we do bias analysis, formally we are asking the question: "how good are the predictions?" The role of bias in the error decomposition is clear: if we trust the labels/targets, then we would want the estimator to have as low bias as possible, in order to minimize error. Fair machine learning is concerned with the question: "Are the predictions equally good for different demographic/social groups?" This has naturally led to a variety of fairness metrics that compare some measure of statistical bias on subsets corresponding to socially privileged and socially disadvantaged groups. In this paper we propose a new family of performance measures based on group-wise parity in variance. We demonstrate when group-wise statistical bias analysis gives an incomplete picture, and what group-wise variance analysis can tell us in settings that differ in the magnitude of statistical bias. We develop and release an open-source library that reconciles uncertainty quantification techniques with fairness analysis, and use it to conduct an extensive empirical analysis of our variance-based fairness measures on standard benchmarks.
REIN: A Comprehensive Benchmark Framework for Data Cleaning Methods in ML Pipelines
Abdelaal, Mohamed, Hammacher, Christian, Schoening, Harald
Nowadays, machine learning (ML) plays a vital role in many aspects of our daily life. In essence, building well-performing ML applications requires the provision of high-quality data throughout the entire life-cycle of such applications. Nevertheless, most of the real-world tabular data suffer from different types of discrepancies, such as missing values, outliers, duplicates, pattern violation, and inconsistencies. Such discrepancies typically emerge while collecting, transferring, storing, and/or integrating the data. To deal with these discrepancies, numerous data cleaning methods have been introduced. However, the majority of such methods broadly overlook the requirements imposed by downstream ML models. As a result, the potential of utilizing these data cleaning methods in ML pipelines is predominantly unrevealed. In this work, we introduce a comprehensive benchmark, called REIN1, to thoroughly investigate the impact of data cleaning methods on various ML models. Through the benchmark, we provide answers to important research questions, e.g., where and whether data cleaning is a necessary step in ML pipelines. To this end, the benchmark examines 38 simple and advanced error detection and repair methods. To evaluate these methods, we utilized a wide collection of ML models trained on 14 publicly-available datasets covering different domains and encompassing realistic as well as synthetic error profiles.
Lung airway geometry as an early predictor of autism: A preliminary machine learning-based study
Islam, Asef, Ronco, Anthony, Becker, Stephen M., Blackburn, Jeremiah, Schittny, Johannes C., Kim, Kyoungmi, Stein-Wexler, Rebecca, Wexler, Anthony S.
The goal of this study is to assess the feasibility of airway geometry as a biomarker for ASD. Chest CT images of children with a documented diagnosis of ASD as well as healthy controls were identified retrospectively. 54 scans were obtained for analysis, including 31 ASD cases and 23 age and sex-matched controls. A feature selection and classification procedure using principal component analysis (PCA) and support vector machine (SVM) achieved a peak cross validation accuracy of nearly 89% using a feature set of 8 airway branching angles. Sensitivity was 94%, but specificity was only 78%. The results suggest a measurable difference in airway branchpoint angles between children with ASD and the control population. Under review at Scientific Reports
Mind the Gap: Measuring Generalization Performance Across Multiple Objectives
Feurer, Matthias, Eggensperger, Katharina, Bergman, Edward, Pfisterer, Florian, Bischl, Bernd, Hutter, Frank
Modern machine learning models are often constructed taking into account multiple objectives, e.g., minimizing inference time while also maximizing accuracy. Multi-objective hyperparameter optimization (MHPO) algorithms return such candidate models, and the approximation of the Pareto front is used to assess their performance. In practice, we also want to measure generalization when moving from the validation to the test set. However, some of the models might no longer be Pareto-optimal which makes it unclear how to quantify the performance of the MHPO method when evaluated on the test set. To resolve this, we provide a novel evaluation protocol that allows measuring the generalization performance of MHPO methods and studying its capabilities for comparing two optimization experiments.
Asking for Help: Failure Prediction in Behavioral Cloning through Value Approximation
Gokmen, Cem, Ho, Daniel, Khansari, Mohi
Recent progress in end-to-end Imitation Learning approaches has shown promising results and generalization capabilities on mobile manipulation tasks. Such models are seeing increasing deployment in real-world settings, where scaling up requires robots to be able to operate with high autonomy, i.e. requiring as little human supervision as possible. In order to avoid the need for one-on-one human supervision, robots need to be able to detect and prevent policy failures ahead of time, and ask for help, allowing a remote operator to supervise multiple robots and help when needed. However, the black-box nature of end-to-end Imitation Learning models such as Behavioral Cloning, as well as the lack of an explicit state-value representation, make it difficult to predict failures. To this end, we introduce Behavioral Cloning Value Approximation (BCVA), an approach to learning a state value function based on and trained jointly with a Behavioral Cloning policy that can be used to predict failures. We demonstrate the effectiveness of BCVA by applying it to the challenging mobile manipulation task of latched-door opening, showing that we can identify failure scenarios with with 86% precision and 81% recall, evaluated on over 2000 real world runs, improving upon the baseline of simple failure classification by 10 percentage-points.
Understanding Policy and Technical Aspects of AI-Enabled Smart Video Surveillance to Address Public Safety
Ardabili, Babak Rahimi, Pazho, Armin Danesh, Noghre, Ghazal Alinezhad, Neff, Christopher, Bhaskararayuni, Sai Datta, Ravindran, Arun, Reid, Shannon, Tabkhi, Hamed
Recent advancements in artificial intelligence (AI) have seen the emergence of smart video surveillance (SVS) in many practical applications, particularly for building safer and more secure communities in our urban environments. Cognitive tasks, such as identifying objects, recognizing actions, and detecting anomalous behaviors, can produce data capable of providing valuable insights to the community through statistical and analytical tools. However, artificially intelligent surveillance systems design requires special considerations for ethical challenges and concerns. The use and storage of personally identifiable information (PII) commonly pose an increased risk to personal privacy. To address these issues, this paper identifies the privacy concerns and requirements needed to address when designing AI-enabled smart video surveillance. Further, we propose the first end-to-end AI-enabled privacy-preserving smart video surveillance system that holistically combines computer vision analytics, statistical data analytics, cloud-native services, and end-user applications. Finally, we propose quantitative and qualitative metrics to evaluate intelligent video surveillance systems. The system shows the 17.8 frame-per-second (FPS) processing in extreme video scenes. However, considering privacy in designing such a system results in preferring the pose-based algorithm to the pixel-based one. This choice resulted in dropping accuracy in both action and anomaly detection tasks. The results drop from 97.48 to 73.72 in anomaly detection and 96 to 83.07 in the action detection task. On average, the latency of the end-to-end system is 36.1 seconds.
Classification of Methods to Reduce Clinical Alarm Signals for Remote Patient Monitoring: A Critical Review
Arora, Teena, Balasubramanian, Venki, Stranieri, Andrew, Mai, Shenhan, Buyya, Rajkumar, Islam, Sardar
Remote Patient Monitoring (RPM) is an emerging technology paradigm that helps reduce clinician workload by automated monitoring and raising intelligent alarm signals. High sensitivity and intelligent data-processing algorithms used in RPM devices result in frequent false-positive alarms, resulting in alarm fatigue. This study aims to critically review the existing literature to identify the causes of these false-positive alarms and categorize the various interventions used in the literature to eliminate these causes. That act as a catalog and helps in false alarm reduction algorithm design. A step-by-step approach to building an effective alarm signal generator for clinical use has been proposed in this work. Second, the possible causes of false-positive alarms amongst RPM applications were analyzed from the literature. Third, a critical review has been done of the various interventions used in the literature depending on causes and classification based on four major approaches: clinical knowledge, physiological data, medical sensor devices, and clinical environments. A practical clinical alarm strategy could be developed by following our pentagon approach. The first phase of this approach emphasizes identifying the various causes for the high number of false-positive alarms. Future research will focus on developing a false alarm reduction method using data mining.