Learning Graphical Models
Efficient estimation of hidden state dynamics from spike trains
Danoczy, Marton G., Hahnloser, Richard H. R.
Neurons can have rapidly changing spike train statistics dictated by the underlying network excitability or behavioural state of an animal. To estimate the time course of such state dynamics from single-or multiple neuronrecordings, we have developed an algorithm that maximizes the likelihood of observed spike trains by optimizing the state lifetimes and the state-conditional interspike-interval (ISI) distributions. Our nonparametric algorithmis free of time-binning and spike-counting problems and has the computational complexity of a Mixed-state Markov Model operating on a state sequence of length equal to the total number ofrecorded spikes. As an example, we fit a two-state model to paired recordings of premotor neurons in the sleeping songbird. We find that the two state-conditional ISI functions are highly similar to the ones measured duringwaking and singing, respectively.
Unbiased Estimator of Shape Parameter for Spiking Irregularities under Changing Environments
Miura, Keiji, Okada, Masato, Amari, Shun-ichi
We considered a gamma distribution of interspike intervals as a statistical modelfor neuronal spike generation. The model parameters consist of a time-dependent firing rate and a shape parameter that characterizes spiking irregularities of individual neurons. Because the environment changes with time, observed data are generated from the time-dependent firing rate, which is an unknown function. A statistical model with an unknown function is called a semiparametric model, which is one of the unsolved problem in statistics and is generally very difficult to solve. We used a novel method of estimating functions in information geometry to estimate the shape parameter without estimating the unknown function. We analytically obtained an optimal estimating function for the shape parameter independent of the functional form of the firing rate. This estimation is efficient without Fisher information loss and better than maximum likelihood estimation.
Searching for Character Models
Edwards, Jaety, Forsyth, David
We introduce a method to automatically improve character models for a handwritten script without the use of transcriptions and using a minimum of document specific training data. We show that we can use searches for the words in a dictionary to identify portions of the document whose transcriptions are unambiguous. Using templates extracted from those regions, we retrain our character prediction model to drastically improve our search retrieval performance for words in the document.
Transfer learning for text classification
Linear text classification algorithms work by computing an inner product betweena test document vector and a parameter vector. In many such algorithms, including naive Bayes and most TFIDF variants, the parameters aredetermined by some simple, closed-form, function of training set statistics; we call this mapping mapping from statistics to parameters, the parameter function. Much research in text classification over the last few decades has consisted of manual efforts to identify better parameter functions. Inthis paper, we propose an algorithm for automatically learning this function from related classification problems. The parameter function foundby our algorithm then defines a new learning algorithm for text classification, which we can apply to novel classification tasks. We find that our learned classifier outperforms existing methods on a variety of multiclass text classification tasks.
Measuring Shared Information and Coordinated Activity in Neuronal Networks
Klinkner, Kristina, Shalizi, Cosma, Camperi, Marcelo
This activity often manifests itself as dynamically coordinated sequences of action potentials. Since multiple electrode recordings are now a standard tool in neuroscience research, it is important to have a measure of such network-wide behavioral coordinationand information sharing, applicable to multiple neural spike train data. We propose a new statistic, informational coherence, which measures how much better one unit can be predicted by knowing the dynamical state of another. We argue informational coherence is a measure of association and shared information which is superior to traditional pairwisemeasures of synchronization and correlation. To find the dynamical states, we use a recently-introduced algorithm which reconstructs effectivestate spaces from stochastic time series.
Learning Multiple Related Tasks using Latent Independent Component Analysis
Zhang, Jian, Ghahramani, Zoubin, Yang, Yiming
We propose a probabilistic model based on Independent Component Analysis for learning multiple related tasks. In our model the task parameters areassumed to be generated from independent sources which account for the relatedness of the tasks. We use Laplace distributions to model hidden sources which makes it possible to identify the hidden, independent components instead of just modeling correlations. Furthermore, ourmodel enjoys a sparsity property which makes it both parsimonious and robust. We also propose efficient algorithms for both empirical Bayes method and point estimation. Our experimental results on two multi-label text classification data sets show that the proposed approach is promising.