Continuous relaxations play an important role in discrete optimization, but have not seen much use in approximate probabilistic inference. Here we show that a general form of the Gaussian Integral Trick makes it possible to transform a wide class of discrete variable undirected models into fully continuous systems. The continuous representation allows the use of gradient-based Hamiltonian Monte Carlo for inference, results in new ways of estimating normalization constants (partition functions), and in general opens up a number of new avenues for inference in difficult discrete systems. We demonstrate some of these continuous relaxation inference algorithms on a number of illustrative problems.

Markov logic is a widely used tool in statistical relational learning, which uses a weighted first-order logic knowledge base to specify a Markov random field (MRF) or a conditional random field (CRF). In many applications, a Markov logic network (MLN) is trained in one domain, but used in a different one. This paper focuses on dynamic Markov logic networks, where the size of the discretized time-domain typically varies between training and testing. It has been previously pointed out that the marginal probabilities of truth assignments to ground atoms can change if one extends or reduces the domains of predicates in an MLN. We show that in addition to this problem, the standard way of unrolling a Markov logic theory into a MRF may result in time-inhomogeneity of the underlying Markov chain. Furthermore, even if these representational problems are not significant for a given domain, we show that the more practical problem of generating samples in a sequential conditional random field for the next slice relying on the samples from the previous slice has high computational cost in the general case, due to the need to estimate a normalization factor for each sample. We propose a new discriminative model, slice normalized dynamic Markov logic networks (SN-DMLN), that suffers from none of these issues. It supports efficient online inference, and can directly model influences between variables within a time slice that do not have a causal direction, in contrast with fully directed models (e.g., DBNs). Experimental results show an improvement in accuracy over previous approaches to online inference in dynamic Markov logic networks.

We introduce a new prior for use in Nonparametric Bayesian Hierarchical Clustering. The prior is constructed by marginalizing out the time information of Kingman's coalescent, providing a prior over tree structures which we call the Time-Marginalized Coalescent (TMC). This allows for models which factorize the tree structure and times, providing two benefits: more flexible priors may be constructed and more efficient Gibbs type inference can be used. We demonstrate this on an example model for density estimation and show the TMC achieves competitive experimental results.

Approaches to audio classification and retrieval tasks largely rely on detectionbased discriminative models. We submit that such models make a simplistic assumption in mapping acoustics directly to semantics, whereas the actual process is likely more complex. We present a generative model that maps acoustics in a hierarchical manner to increasingly higher-level semantics. Our model has two layers with the first layer modeling generalized sound units with no clear semantic associations, while the second layer models local patterns over these sound units. We evaluate our model on a large-scale retrieval task from TRECVID 2011, and report significant improvements over standard baselines.

Applications of Bayesian nonparametric methods require learning and inference algorithms which efficiently explore models of unbounded complexity. We develop new Markov chain Monte Carlo methods for the beta process hidden Markov model (BP-HMM), enabling discovery of shared activity patterns in large video and motion capture databases. By introducing split-merge moves based on sequential allocation, we allow large global changes in the shared feature structure. We also develop data-driven reversible jump moves which more reliably discover rare or unique behaviors. Our proposals apply to any choice of conjugate likelihood for observed data, and we show success with multinomial, Gaussian, and autoregressive emission models. Together, these innovations allow tractable analysis of hundreds of time series, where previous inference required clever initialization and lengthy burn-in periods for just six sequences.

Probabilistic graphical models are powerful tools for analyzing constrained, continuous domains. However, finding most-probable explanations (MPEs) in these models can be computationally expensive. In this paper, we improve the scalability of MPE inference in a class of graphical models with piecewise-linear and piecewise-quadratic dependencies and linear constraints over continuous domains. We derive algorithms based on a consensus-optimization framework and demonstrate their superior performance over state of the art. We show empirically that in a large-scale voter-preference modeling problem our algorithms scale linearly in the number of dependencies and constraints.

Conditional Markov Chains (also known as Linear-Chain Conditional Random Fields in the literature) are a versatile class of discriminative models for the distribution of a sequence of hidden states conditional on a sequence of observable variables. Large-sample properties of Conditional Markov Chains have been first studied in [1]. The paper extends this work in two directions: first, mixing properties of models with unbounded feature functions are being established; second, necessary conditions for model identifiability and the uniqueness of maximum likelihood estimates are being given.

Probabilistic latent variable models are one of the cornerstones of machine learning. They offer a convenient and coherent way to specify prior distributions over unobserved structure in data, so that these unknown properties can be inferred via posterior inference. Such models are useful for exploratory analysis and visualization, for building density models of data, and for providing features that can be used for later discriminative tasks. A significant limitation of these models, however, is that draws from the prior are often highly redundant due to i.i.d.

This paper proposes a novel image representation called a Graphical Gaussian Vector (GGV), which is a counterpart of the codebook and local feature matching approaches. We model the distribution of local features as a Gaussian Markov Random Field (GMRF) which can efficiently represent the spatial relationship among local features. Using concepts of information geometry, proper parameters and a metric from the GMRF can be obtained. Then we define a new image feature by embedding the proper metric into the parameters, which can be directly applied to scalable linear classifiers. We show that the GGV obtains better performance over the state-of-the-art methods in the standard object recognition datasets and comparable performance in the scene dataset.

Characterizing the information carried by neural populations in the brain requires accurate statistical models of neural spike responses. The negative-binomial distribution provides a convenient model for over-dispersed spike counts, that is, responses with greater-than-Poisson variability. Here we describe a powerful data-augmentation framework for fully Bayesian inference in neural models with negative-binomial spiking. Our approach relies on a recently described latentvariable representation of the negative-binomial distribution, which equates it to a Polya-gamma mixture of normals. This framework provides a tractable, conditionally Gaussian representation of the posterior that can be used to design efficient EM and Gibbs sampling based algorithms for inference in regression and dynamic factor models. We apply the model to neural data from primate retina and show that it substantially outperforms Poisson regression on held-out data, and reveals latent structure underlying spike count correlations in simultaneously recorded spike trains.