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Probabilistic Inference of Hand Motion from Neural Activity in Motor Cortex

Neural Information Processing Systems

Statistical learning and probabilistic inference techniques are used to infer thehand position of a subject from multi-electrode recordings of neural activityin motor cortex. First, an array of electrodes provides training dataof neural firing conditioned on hand kinematics. We learn a nonparametric representationof this firing activity using a Bayesian model and rigorously compare it with previous models using cross-validation. Second, we infer a posterior probability distribution over hand motion conditioned on a sequence of neural test data using Bayesian inference. The learned firing models of multiple cells are used to define a non-Gaussian likelihood term which is combined with a prior probability for the kinematics. A particle filtering method is used to represent, update, and propagate the posterior distribution over time. The approach is compared withtraditional linear filtering methods; the results suggest that it may be appropriate for neural prosthetic applications.


A Maximum-Likelihood Approach to Modeling Multisensory Enhancement

Neural Information Processing Systems

Multisensory response enhancement (MRE) is the augmentation of the response of a neuron to sensory input of one modality by simultaneous inputfrom another modality. The maximum likelihood (ML) model presented here modifies the Bayesian model for MRE (Anastasio et al.) by incorporating a decision strategy to maximize the number of correct decisions. Thus the ML model can also deal with the important tasks of stimulus discrimination and identification inthe presence of incongruent visual and auditory cues. It accounts for the inverse effectiveness observed in neurophysiological recordingdata, and it predicts a functional relation between uni-and bimodal levels of discriminability that is testable both in neurophysiological and behavioral experiments.


A Quantitative Model of Counterfactual Reasoning

Neural Information Processing Systems

In this paper we explore two quantitative approaches to the modelling of counterfactual reasoning - a linear and a noisy-OR model - based on information containedin conceptual dependency networks. Empirical data is acquired in a study and the fit of the models compared to it. We conclude byconsidering the appropriateness of nonparametric approaches to counterfactual reasoning, and examining the prospects for other parametric approachesin the future.


Causal Categorization with Bayes Nets

Neural Information Processing Systems

A theory of categorization is presented in which knowledge of causal relationships between category features is represented as a Bayesian network. Referred to as causal-model theory, this theory predicts that objects are classified as category members to the extent they are likely to have been produced by a categorys causal model. On this view, people have models of the world that lead them to expect a certain distribution of features in category members (e.g., correlations between feature pairs that are directly connected by causal relationships), and consider exemplars good category members when they manifest those expectations. These expectations include sensitivity to higher-order feature interactions that emerge from the asymmetries inherent in causal relationships. Research on the topic of categorization has traditionally focused on the problem of learning new categories given observations of category members.


A Bayesian Model Predicts Human Parse Preference and Reading Times in Sentence Processing

Neural Information Processing Systems

Narayanan and Jurafsky (1998) proposed that human language comprehension canbe modeled by treating human comprehenders as Bayesian reasoners, and modeling the comprehension process with Bayesian decision trees.In this paper we extend the Narayanan and Jurafsky model to make further predictions about reading time given the probability of difference parses or interpretations, and test the model against reading time data from a psycholinguistic experiment.


A Rational Analysis of Cognitive Control in a Speeded Discrimination Task

Neural Information Processing Systems

We are interested in the mechanisms by which individuals monitor and adjust their performance of simple cognitive tasks. We model a speeded discrimination task in which individuals are asked to classify a sequence of stimuli (Jones & Braver, 2001). Response conflict arises when one stimulus class is infrequent relative to another, resulting in more errors and slower reaction times for the infrequent class. How do control processes modulatebehavior based on the relative class frequencies? We explain performance from a rational perspective that casts the goal of individuals as minimizing a cost that depends both on error rate and reaction time.With two additional assumptions of rationality--that class prior probabilities are accurately estimated and that inference is optimal subject to limitations on rate of information transmission--we obtain a good fit to overall RT and error data, as well as trial-by-trial variations in performance.


When do Numbers Really Matter?

Journal of Artificial Intelligence Research

Common wisdom has it that small distinctions in the probabilities (parameters) quantifying a belief network do not matter much for the results of probabilistic queries. Yet, one can develop realistic scenarios under which small variations in network parameters can lead to significant changes in computed queries. A pending theoretical question is then to analytically characterize parameter changes that do or do not matter. In this paper, we study the sensitivity of probabilistic queries to changes in network parameters and prove some tight bounds on the impact that such parameters can have on queries. Our analytic results pinpoint some interesting situations under which parameter changes do or do not matter. These results are important for knowledge engineers as they help them identify influential network parameters. They also help explain some of the previous experimental results and observations with regards to network robustness against parameter changes.


Robust Feature Selection by Mutual Information Distributions

arXiv.org Artificial Intelligence

Mutual information is widely used in artificial intelligence, in a descriptive way, to measure the stochastic dependence of discrete random variables. In order to address questions such as the reliability of the empirical value, one must consider sample-to-population inferential approaches. This paper deals with the distribution of mutual information, as obtained in a Bayesian framework by a second-order Dirichlet prior distribution. The exact analytical expression for the mean and an analytical approximation of the variance are reported. Asymptotic approximations of the distribution are proposed. The results are applied to the problem of selecting features for incremental learning and classification of the naive Bayes classifier. A fast, newly defined method is shown to outperform the traditional approach based on empirical mutual information on a number of real data sets. Finally, a theoretical development is reported that allows one to efficiently extend the above methods to incomplete samples in an easy and effective way.


SMOTE: Synthetic Minority Over-sampling Technique

Journal of Artificial Intelligence Research

An approach to the construction of classifiers from imbalanced datasets is described. A dataset is imbalanced if the classification categories are not approximately equally represented. Often real-world data sets are predominately composed of ``normal'' examples with only a small percentage of ``abnormal'' or ``interesting'' examples. It is also the case that the cost of misclassifying an abnormal (interesting) example as a normal example is often much higher than the cost of the reverse error. Under-sampling of the majority (normal) class has been proposed as a good means of increasing the sensitivity of a classifier to the minority class. This paper shows that a combination of our method of over-sampling the minority (abnormal) class and under-sampling the majority (normal) class can achieve better classifier performance (in ROC space) than only under-sampling the majority class. This paper also shows that a combination of our method of over-sampling the minority class and under-sampling the majority class can achieve better classifier performance (in ROC space) than varying the loss ratios in Ripper or class priors in Naive Bayes. Our method of over-sampling the minority class involves creating synthetic minority class examples. Experiments are performed using C4.5, Ripper and a Naive Bayes classifier. The method is evaluated using the area under the Receiver Operating Characteristic curve (AUC) and the ROC convex hull strategy.


Entropy estimation of symbol sequences

arXiv.org Machine Learning

We discuss algorithms for estimating the Shannon entropy h of finite symbol sequences with long range correlations. In particular, we consider algorithms which estimate h from the code lengths produced by some compression algorithm. Our interest is in describing their convergence with sequence length, assuming no limits for the space and time complexities of the compression algorithms. A scaling law is proposed for extrapolation from finite sample lengths. This is applied to sequences of dynamical systems in non-trivial chaotic regimes, a 1-D cellular automaton, and to written English texts.