Directed Networks
Searching for Bayesian Network Structures in the Space of Restricted Acyclic Partially Directed Graphs
Although many algorithms have been designed to construct Bayesian network structures using different approaches and principles, they all employ only two methods: those based on independence criteria, and those based on a scoring function and a search procedure (although some methods combine the two). Within the score+search paradigm, the dominant approach uses local search methods in the space of directed acyclic graphs (DAGs), where the usual choices for defining the elementary modifications (local changes) that can be applied are arc addition, arc deletion, and arc reversal. In this paper, we propose a new local search method that uses a different search space, and which takes account of the concept of equivalence between network structures: restricted acyclic partially directed graphs (RPDAGs). In this way, the number of different configurations of the search space is reduced, thus improving efficiency. Moreover, although the final result must necessarily be a local optimum given the nature of the search method, the topology of the new search space, which avoids making early decisions about the directions of the arcs, may help to find better local optima than those obtained by searching in the DAG space. Detailed results of the evaluation of the proposed search method on several test problems, including the well-known Alarm Monitoring System, are also presented.
Global Coordination of Local Linear Models
Roweis, Sam T., Saul, Lawrence K., Hinton, Geoffrey E.
High dimensional data that lies on or near a low dimensional manifold can be described by a collection of local linear models. Such a description, however, does not provide a global parameterization of the manifold--arguably an important goal of unsupervised learning. In this paper, we show how to learn a collection of local linear models that solves this more difficult problem. Our local linear models are represented by a mixture of factor analyzers, and the "global coordination" of these models is achieved by adding a regularizing term to the standard maximum likelihood objective function. The regularizer breaks a degeneracy in the mixture model's parameter space, favoring models whose internal coordinate systems are aligned in a consistent way. As a result, the internal coordinates change smoothly and continuously as one traverses a connected path on the manifold--even when the path crosses the domains of many different local models. The regularizer takes the form of a Kullback-Leibler divergence and illustrates an unexpected application of variational methods: not to perform approximate inference in intractable probabilistic models, but to learn more useful internal representations in tractable ones.
Probabilistic Inference of Hand Motion from Neural Activity in Motor Cortex
Gao, Yun, Black, Michael J., Bienenstock, Elie, Shoham, Shy, Donoghue, John P.
Statistical learning and probabilistic inference techniques are used to infer the hand position of a subject from multi-electrode recordings of neural activity in motor cortex. First, an array of electrodes provides training data of neural firing conditioned on hand kinematics. We learn a nonparametric representation of this firing activity using a Bayesian model and rigorously compare it with previous models using cross-validation. Second, we infer a posterior probability distribution over hand motion conditioned on a sequence of neural test data using Bayesian inference. The learned firing models of multiple cells are used to define a non-Gaussian likelihood term which is combined with a prior probability for the kinematics. A particle filtering method is used to represent, update, and propagate the posterior distribution over time. The approach is compared with traditional linear filtering methods; the results suggest that it may be appropriate for neural prosthetic applications.
Geometrical Singularities in the Neuromanifold of Multilayer Perceptrons
Amari, Shun-ichi, Park, Hyeyoung, Ozeki, Tomoko
Singularities are ubiquitous in the parameter space of hierarchical models such as multilayer perceptrons. At singularities, the Fisher information matrix degenerates, and the Cramer-Rao paradigm does no more hold, implying that the classical model selection theory such as AIC and MDL cannot be applied. It is important to study the relation between the generalization error and the training error at singularities. The present paper demonstrates a method of analyzing these errors both for the maximum likelihood estimator and the Bayesian predictive distribution in terms of Gaussian random fields, by using simple models. 1 Introduction A neural network is specified by a number of parameters which are synaptic weights and biases. Learning takes place by modifying these parameters from observed input-output examples.
Reducing multiclass to binary by coupling probability estimates
This paper presents a method for obtaining class membership probability estimates for multiclass classification problems by coupling the probability estimates produced by binary classifiers. This is an extension for arbitrary code matrices of a method due to Hastie and Tibshirani for pairwise coupling of probability estimates. Experimental results with Boosted Naive Bayes show that our method produces calibrated class membership probability estimates, while having similar classification accuracy as loss-based decoding, a method for obtaining the most likely class that does not generate probability estimates.
Multiagent Planning with Factored MDPs
Guestrin, Carlos, Koller, Daphne, Parr, Ronald
We present a principled and efficient planning algorithm for cooperative multiagent dynamic systems. A striking feature of our method is that the coordination and communication between the agents is not imposed, but derived directly from the system dynamics and function approximation architecture. We view the entire multiagent system as a single, large Markov decision process (MDP), which we assume can be represented in a factored way using a dynamic Bayesian network (DBN). The action space of the resulting MDP is the joint action space of the entire set of agents. Our approach is based on the use of factored linear value functions as an approximation to the joint value function.
A Bayesian Network for Real-Time Musical Accompaniment
We describe a computer system that provides a real-time musical accompaniment for a live soloist in a piece of non-improvised music for soloist and accompaniment. A Bayesian network is developed that represents the joint distribution on the times at which the solo and accompaniment notes are played, relating the two parts through a layer of hidden variables. The network is first constructed using the rhythmic information contained in the musical score. The network is then trained to capture the musical interpretations of the soloist and accompanist in an off-line rehearsal phase. During live accompaniment the learned distribution of the network is combined with a real-time analysis of the soloist's acoustic signal, performed with a hidden Markov model, to generate a musically principled accompaniment that respects all available sources of knowledge. A live demonstration will be provided.
Using Vocabulary Knowledge in Bayesian Multinomial Estimation
Griffiths, Thomas L., Tenenbaum, Joshua B.
Recent approaches have used uncertainty over the vocabulary of symbols in a multinomial distribution as a means of accounting for sparsity. We present a Bayesian approach that allows weak prior knowledge, in the form of a small set of approximate candidate vocabularies, to be used to dramatically improve the resulting estimates. We demonstrate these improvements in applications to text compression and estimating distributions over words in newsgroup data.
Bayesian Predictive Profiles With Applications to Retail Transaction Data
Cadez, Igor V., Smyth, Padhraic
Massive transaction data sets are recorded in a routine manner in telecommunications, retail commerce, and Web site management. In this paper we address the problem of inferring predictive individual profiles from such historical transaction data. We describe a generative mixture model for count data and use an an approximate Bayesian estimation framework that effectively combines an individual's specific history with more general population patterns. We use a large real-world retail transaction data set to illustrate how these profiles consistently outperform non-mixture and non-Bayesian techniques in predicting customer behavior in out-of-sample data.
Unsupervised Learning of Human Motion Models
Song, Yang, Goncalves, Luis, Perona, Pietro
This paper presents an unsupervised learning algorithm that can derive the probabilistic dependence structure of parts of an object (a moving human body in our examples) automatically from unlabeled data. The distinguished part of this work is that it is based on unlabeled data, i.e., the training features include both useful foreground parts and background clutter and the correspondence between the parts and detected features are unknown. We use decomposable triangulated graphs to depict the probabilistic independence of parts, but the unsupervised technique is not limited to this type of graph. In the new approach, labeling of the data (part assignments) is taken as hidden variables and the EM algorithm is applied. A greedy algorithm is developed to select parts and to search for the optimal structure based on the differential entropy of these variables. The success of our algorithm is demonstrated by applying it to generate models of human motion automatically from unlabeled real image sequences.