Loopy belief propagation (BP) has been successfully used in a number of difficult graphical models to find the most probable configuration of the hidden variables. In applications ranging from protein folding to image analysis one would like to find not just the best configuration but rather the top M. While this problem has been solved using the junction tree formalism, in many real world problems the clique size in the junction tree is prohibitively large. In this work we address the problem of finding the M best configurations when exact inference is impossible. We start by developing a new exact inference algorithm for calculating the best configurations that uses only max-marginals. For approximate inference, we replace the max-marginals with the beliefs calculated using max-product BP and generalized BP. We show empirically that the algorithm can accurately and rapidly approximate the M best configurations in graphs with hundreds of variables.

Loopy belief propagation (BP) has been successfully used in a number of difficult graphical models to find the most probable configuration of the hidden variables. In applications ranging from protein folding to image analysis one would like to find not just the best configuration but rather the top M. While this problem has been solved using the junction tree formalism, in many real world problems the clique size in the junction tree is prohibitively large. In this work we address the problem of finding the M best configurations when exact inference is impossible. We start by developing a new exact inference algorithm for calculating the best configurations that uses only max-marginals. For approximate inference, we replace the max-marginals with the beliefs calculated using max-product BP and generalized BP. We show empirically that the algorithm can accurately and rapidly approximate the M best configurations in graphs with hundreds of variables.

The detection and pose estimation of people in images and video is made challenging by the variability of human appearance, the complexity of natural scenes, and the high dimensionality of articulated body models. To cope with these problems we represent the 3D human body as a graphical model in which the relationships between the body parts are represented by conditional probability distributions. We formulate the pose estimation problem as one of probabilistic inference over a graphical model where the random variables correspond to the individual limb parameters (position and orientation). Because the limbs are described by 6-dimensional vectors encoding pose in 3-space, discretization is impractical and the random variables in our model must be continuousvalued. To approximate belief propagation in such a graph we exploit a recently introduced generalization of the particle filter. This framework facilitates the automatic initialization of the body-model from low level cues and is robust to occlusion of body parts and scene clutter.

Existing source location and recovery algorithms used in magnetoencephalographic imaging generally assume that the source activity at different brain locations is independent or that the correlation structure is known. However, electrophysiological recordings of local field potentials show strong correlations in aggregate activity over significant distances. Indeed, it seems very likely that stimulus-evoked activity would follow strongly correlated time-courses in different brain areas. Here, we present, and validate through simulations, a new approach to source reconstruction in which the correlation between sources is modelled and estimated explicitly by variational Bayesian methods, facilitating accurate recovery of source locations and the time-courses of their activation.

We present an analysis of concentration-of-expectation phenomena in layered Bayesian networks that use generalized linear models as the local conditional probabilities. This framework encompasses a wide variety of probability distributions, including both discrete and continuous random variables. We utilize ideas from large deviation analysis and the delta method to devise and evaluate a class of approximate inference algorithms for layered Bayesian networks that have superior asymptotic error bounds and very fast computation time.

Consider a number of moving points, where each point is attached to a joint of the human body and projected onto an image plane. Johannson showed that humans can effortlessly detect and recognize the presence of other humans from such displays. This is true even when some of the body points are missing (e.g. because of occlusion) and unrelated clutter points are added to the display. We are interested in replicating this ability in a machine. To this end, we present a labelling and detection scheme in a probabilistic framework. Our method is based on representing the joint probability density of positions and velocities of body points with a graphical model, and using Loopy Belief Propagation to calculate a likely interpretation of the scene. Furthermore, we introduce a global variable representing the body's centroid. Experiments on one motion-captured sequence suggest that our scheme improves on the accuracy of a previous approach based on triangulated graphical models, especially when very few parts are visible. The improvement is due both to the more general graph structure we use and, more significantly, to the introduction of the centroid variable.

We present a Bayesian approach to color constancy which utilizes a non-Gaussian probabilistic model of the image formation process. The parameters of this model are estimated directly from an uncalibrated image set and a small number of additional algorithmic parameters are chosen using cross validation. The algorithm is empirically shown to exhibit RMS error lower than other color constancy algorithms based on the Lambertian surface reflectance model when estimating the illuminants of a set of test images. This is demonstrated via a direct performance comparison utilizing a publicly available set of real world test images and code base.

The detection and pose estimation of people in images and video is made challenging by the variability of human appearance, the complexity of natural scenes, and the high dimensionality of articulated body models. To cope with these problems we represent the 3D human body as a graphical model in which the relationships between the body parts are represented by conditional probability distributions. We formulate the pose estimation problem as one of probabilistic inference over a graphical model where the random variables correspond to the individual limb parameters (position and orientation). Because the limbs are described by 6-dimensional vectors encoding pose in 3-space, discretization is impractical and the random variables in our model must be continuousvalued. To approximate belief propagation in such a graph we exploit a recently introduced generalization of the particle filter. This framework facilitates the automatic initialization of the body-model from low level cues and is robust to occlusion of body parts and scene clutter.

In this paper we present Discriminative Random Fields (DRF), a discriminative framework for the classification of natural image regions by incorporating neighborhood spatial dependencies in the labels as well as the observed data. The proposed model exploits local discriminative models and allows to relax the assumption of conditional independence of the observed data given the labels, commonly used in the Markov Random Field (MRF) framework. The parameters of the DRF model are learned using penalized maximum pseudo-likelihood method. Furthermore, the form of the DRF model allows the MAP inference for binary classification problems using the graph min-cut algorithms. The performance of the model was verified on the synthetic as well as the real-world images. The DRF model outperforms the MRF model in the experiments.

When we model a higher order functions, such as learning and memory, we face a difficulty of comparing neural activities with hidden variables that depend on the history of sensory and motor signals and the dynamics of the network. Here, we propose novel method for estimating hidden variables of a learning agent, such as connection weights from sequences of observable variables. Bayesian estimation is a method to estimate the posterior probability of hidden variables from observable data sequence using a dynamic model of hidden and observable variables. In this paper, we apply particle filter for estimating internal parameters and metaparameters of a reinforcement learning model. We verified the effectiveness of the method using both artificial data and real animal behavioral data.