Directed Networks
Causal Discovery from a Mixture of Experimental and Observational Data
Cooper, Gregory F., Yoo, Changwon
This paper describes a Bayesian method for combining an arbitrary mixture of observational and experimental data in order to learn causal Bayesian networks. Observational data are passively observed. Experimental data, such as that produced by randomized controlled trials, result from the experimenter manipulating one or more variables (typically randomly) and observing the states of other variables. The paper presents a Bayesian method for learning the causal structure and parameters of the underlying causal process that is generating the data, given that (1) the data contains a mixture of observational and experimental case records, and (2) the causal process is modeled as a causal Bayesian network. This learning method was applied using as input various mixtures of experimental and observational data that were generated from the ALARM causal Bayesian network. In these experiments, the absolute and relative quantities of experimental and observational data were varied systematically. For each of these training datasets, the learning method was applied to predict the causal structure and to estimate the causal parameters that exist among randomly selected pairs of nodes in ALARM that are not confounded. The paper reports how these structure predictions and parameter estimates compare with the true causal structures and parameters as given by the ALARM network.
Learning Polytrees
We consider the task of learning the maximum-likelihood polytree from data. Our first result is a performance guarantee establishing that the optimal branching (or Chow-Liu tree), which can be computed very easily, constitutes a good approximation to the best polytree. We then show that it is not possible to do very much better, since the learning problem is NP-hard even to approximately solve within some constant factor.
Loglinear models for first-order probabilistic reasoning
Recent work on loglinear models in probabilistic constraint logic programming is applied to first-order probabilistic reasoning. Probabilities are defined directly on the proofs of atomic formulae, and by marginalisation on the atomic formulae themselves. We use Stochastic Logic Programs (SLPs) composed of labelled and unlabelled definite clauses to define the proof probabilities. We have a conservative extension of first-order reasoning, so that, for example, there is a one-one mapping between logical and random variables. We show how, in this framework, Inductive Logic Programming (ILP) can be used to induce the features of a loglinear model from data. We also compare the presented framework with other approaches to first-order probabilistic reasoning.
Quantifier Elimination for Statistical Problems
Geiger, Dan, Meek, Christopher
Recent improvement on Tarski's procedure for quantifier elimination in the first order theory of real numbers makes it feasible to solve small instances of the following problems completely automatically: 1. listing all equality and inequality constraints implied by a graphical model with hidden variables. 2. Comparing graphyical models with hidden variables (i.e., model equivalence, inclusion, and overlap). 3. Answering questions about the identification of a model or portion of a model, and about bounds on quantities derived from a model. 4. Determing whether a given set of independence assertions. We discuss the foundation of quantifier elimination and demonstrate its application to these problems.
Learning Bayesian Network Structure from Massive Datasets: The "Sparse Candidate" Algorithm
Friedman, Nir, Nachman, Iftach, Pe'er, Dana
Learning Bayesian networks is often cast as an optimization problem, where the computational task is to find a structure that maximizes a statistically motivated score. By and large, existing learning tools address this optimization problem using standard heuristic search techniques. Since the search space is extremely large, such search procedures can spend most of the time examining candidates that are extremely unreasonable. This problem becomes critical when we deal with data sets that are large either in the number of instances, or the number of attributes. In this paper, we introduce an algorithm that achieves faster learning by restricting the search space. This iterative algorithm restricts the parents of each variable to belong to a small subset of candidates. We then search for a network that satisfies these constraints. The learned network is then used for selecting better candidates for the next iteration. We evaluate this algorithm both on synthetic and real-life data. Our results show that it is significantly faster than alternative search procedures without loss of quality in the learned structures.
Model-Based Bayesian Exploration
Dearden, Richard, Friedman, Nir, Andre, David
Reinforcement learning systems are often concerned with balancing exploration of untested actions against exploitation of actions that are known to be good. The benefit of exploration can be estimated using the classical notion of Value of Information - the expected improvement in future decision quality arising from the information acquired by exploration. Estimating this quantity requires an assessment of the agent's uncertainty about its current value estimates for states. In this paper we investigate ways of representing and reasoning about this uncertainty in algorithms where the system attempts to learn a model of its environment. We explicitly represent uncertainty about the parameters of the model and build probability distributions over Q-values based on these. These distributions are used to compute a myopic approximation to the value of information for each action and hence to select the action that best balances exploration and exploitation.
Bayes Nets in Educational Assessment: Where Do the Numbers Come From?
Mislevy, Robert, Almond, Russell, Yan, Duanli, Steinberg, Linda S.
As observations and student models become complex, educational assessments that exploit advances in technology and cognitive psychology can outstrip familiar testing models and analytic methods. Within the Portal conceptual framework for assessment design, Bayesian inference networks (BINs) record beliefs about students' knowledge and skills, in light of what they say and do. Joining evidence model BIN fragments- which contain observable variables and pointers to student model variables - to the student model allows one to update belief about knowledge and skills as observations arrive. Markov Chain Monte Carlo (MCMC) techniques can estimate the required conditional probabilities from empirical data, supplemented by expert judgment or substantive theory. Details for the special cases of item response theory (IRT) and multivariate latent class modeling are given, with a numerical example of the latter.
Contextual Weak Independence in Bayesian Networks
Wong, Michael S. K. M., Butz, C. J.
It is well-known that the notion of (strong) conditional independence (CI) is too restrictive to capture independencies that only hold in certain contexts. This kind of contextual independency, called context-strong independence (CSI), can be used to facilitate the acquisition, representation, and inference of probabilistic knowledge. In this paper, we suggest the use of contextual weak independence (CWI) in Bayesian networks. It should be emphasized that the notion of CWI is a more general form of contextual independence than CSI. Furthermore, if the contextual strong independence holds for all contexts, then the notion of CSI becomes strong CI. On the other hand, if the weak contextual independence holds for all contexts, then the notion of CWI becomes weak independence (WI) nwhich is a more general noncontextual independency than strong CI. More importantly, complete axiomatizations are studied for both the class of WI and the class of CI and WI together. Finally, the interesting property of WI being a necessary and sufficient condition for ensuring consistency in granular probabilistic networks is shown.
Learning Bayesian Networks with Restricted Causal Interactions
Neil, Julian R., Wallace, Chris S., Korb, Kevin B.
A major problem for the learning of Bayesian networks (BNs) is the exponential number of parameters needed for conditional probability tables. Recent research reduces this complexity by modeling local structure in the probability tables. We examine the use of log-linear local models. While log-linear models in this context are not new (Whittaker, 1990; Buntine, 1991; Neal, 1992; Heckerman and Meek, 1997), for structure learning they are generally subsumed under a naive Bayes model. We describe an alternative interpretation, and use a Minimum Message Length (MML) (Wallace, 1987) metric for structure learning of networks exhibiting causal independence, which we term first-order networks (FONs). We also investigate local model selection on a node-by-node basis.
Choosing Among Interpretations of Probability
Kyburg, Henry E. Jr., Teng, Choh Man
There is available an ever-increasing variety of procedures for managing uncertainty. These methods are discussed in the literature of artificial intelligence, as well as in the literature of philosophy of science. Heretofore these methods have been evaluated by intuition, discussion, and the general philosophical method of argument and counterexample. Almost any method of uncertainty management will have the property that in the long run it will deliver numbers approaching the relative frequency of the kinds of events at issue. To find a measure that will provide a meaningful evaluation of these treatments of uncertainty, we must look, not at the long run, but at the short or intermediate run. Our project attempts to develop such a measure in terms of short or intermediate length performance. We represent the effects of practical choices by the outcomes of bets offered to agents characterized by two uncertainty management approaches: the subjective Bayesian approach and the Classical confidence interval approach. Experimental evaluation suggests that the confidence interval approach can outperform the subjective approach in the relatively short run.