Weaknesses: - Can we interpret the results as follows: If the TAR assumption is satisfied with positive limits, and we use MLE, then temporal interference does not cause bias. If this interpretation is correct, then it would be illuminating if the authors provide the intuitive connection between the TAR assumption and temporal interference. It is not clear if the estimations that the authors have required are feasible if the state space is large. The next natural question is how robust the results are if we use other methods for estimation. This could have been shown by providing some simulations, which is a part missing from the manuscript.

The paper studied the online experimental design problem where there are temporal dependencies between the two control policies/treatments. The novelty of the problem setup and the theoretical analysis in the paper are appreciated by all the reviewers. Although the analysis is the main contribution, the paper would be much stronger if there are meaningful experiments on toy problems to showcase the performance the online MLE-based approach vs the standard experimental design approaches.

This paper contributes a new technique for the estimation of structure in continuous time Bayesian networks, and completes the picture with an accompanying inference method and an illustration on a real-world problem. There is agreement among reviewers that this is a high quality contribution, if one takes the confidence-weighted scores from reviewers into account. As a point for improvement for the paper, we could reiterate a comment that was raised in the reviewer discussion: "[the paper] is missing reasonable and helpful experimental comparisons that are not hard to do, given that the code exists already in CTBN-RLE" and the authors are encouraged to consider broadening their experimental comparisons for a final published version.

Variational autoencoders (VAEs) are a popular framework for modeling complex data distributions; they can be efficiently trained via variational inference by maximizing the evidence lower bound (ELBO), at the expense of a gap to the exact (log-)marginal likelihood. While VAEs are commonly used for representation learning, it is unclear why ELBO maximization would yield useful representations, since unregularized maximum likelihood estimation cannot invert the data-generating process. Yet, VAEs often succeed at this task. We seek to elucidate this apparent paradox by studying nonlinear VAEs in the limit of near-deterministic decoders. We first prove that, in this regime, the optimal encoder approximately inverts the decoder---a commonly used but unproven conjecture---which we refer to as self-consistency.

Advanced sensors and IoT devices have improved the monitoring and control of complex industrial enterprises. They have also created an interdependent fabric of geographically distributed process operations (clients) across these enterprises. Granger causality is an effective approach to detect and quantify interdependencies by examining how one client's state affects others over time. Understanding these interdependencies captures how localized events, such as faults and disruptions, can propagate throughout the system, possibly causing widespread operational impacts. However, the large volume and complexity of industrial data pose challenges in modeling these interdependencies. This paper develops a federated approach to learning Granger causality. We utilize a linear state space system framework that leverages low-dimensional state estimates to analyze interdependencies. This addresses bandwidth limitations and the computational burden commonly associated with centralized data processing. We propose augmenting the client models with the Granger causality information learned by the server through a Machine Learning (ML) function. We examine the co-dependence between the augmented client and server models and reformulate the framework as a standalone ML algorithm providing conditions for its sublinear and linear convergence rates. We also study the convergence of the framework to a centralized oracle model. Moreover, we include a differential privacy analysis to ensure data security while preserving causal insights. Using synthetic data, we conduct comprehensive experiments to demonstrate the robustness of our approach to perturbations in causality, the scalability to the size of communication, number of clients, and the dimensions of raw data. We also evaluate the performance on two real-world industrial control system datasets by reporting the volume of data saved by decentralization.

Healthcare decision-making requires not only accurate predictions but also insights into how factors influence patient outcomes. While traditional Machine Learning (ML) models excel at predicting outcomes, such as identifying high risk patients, they are limited in addressing what-if questions about interventions. This study introduces the Probabilistic Causal Fusion (PCF) framework, which integrates Causal Bayesian Networks (CBNs) and Probability Trees (PTrees) to extend beyond predictions. PCF leverages causal relationships from CBNs to structure PTrees, enabling both the quantification of factor impacts and simulation of hypothetical interventions. PCF was validated on three real-world healthcare datasets i.e. MIMIC-IV, Framingham Heart Study, and Diabetes, chosen for their clinically diverse variables. It demonstrated predictive performance comparable to traditional ML models while providing additional causal reasoning capabilities. To enhance interpretability, PCF incorporates sensitivity analysis and SHapley Additive exPlanations (SHAP). Sensitivity analysis quantifies the influence of causal parameters on outcomes such as Length of Stay (LOS), Coronary Heart Disease (CHD), and Diabetes, while SHAP highlights the importance of individual features in predictive modeling. By combining causal reasoning with predictive modeling, PCF bridges the gap between clinical intuition and data-driven insights. Its ability to uncover relationships between modifiable factors and simulate hypothetical scenarios provides clinicians with a clearer understanding of causal pathways. This approach supports more informed, evidence-based decision-making, offering a robust framework for addressing complex questions in diverse healthcare settings.

In statistical classification and machine learning, classification error is an important performance measure, which is minimized by the Bayes decision rule. In practice, the unknown true distribution is usually replaced with a model distribution estimated from the training data in the Bayes decision rule. This substitution introduces a mismatch between the Bayes error and the model-based classification error. In this work, we apply classification error bounds to study the relationship between the error mismatch and the Kullback-Leibler divergence in machine learning. Motivated by recent observations of low model-based classification errors in many machine learning tasks, bounding the Bayes error to be lower, we propose a linear approximation of the classification error bound for low Bayes error conditions. Then, the bound for class priors are discussed. Moreover, we extend the classification error bound for sequences. Using automatic speech recognition as a representative example of machine learning applications, this work analytically discusses the correlations among different performance measures with extended bounds, including cross-entropy loss, language model perplexity, and word error rate.

We examine the use of different randomisation policies for stochastic gradient algorithms used in sampling, based on first-order (or overdamped) Langevin dynamics, the most popular of which is known as Stochastic Gradient Langevin Dynamics. Conventionally, this algorithm is combined with a specific stochastic gradient strategy, called Robbins-Monro. In this work, we study an alternative strategy, Random Reshuffling, and show convincingly that it leads to improved performance via: a) a proof of reduced bias in the Wasserstein metric for strongly convex, gradient Lipschitz potentials; b) an analytical demonstration of reduced bias for a Gaussian model problem; and c) an empirical demonstration of reduced bias in numerical experiments for some logistic regression problems. This is especially important since Random Reshuffling is typically more efficient due to memory access and cache reasons. Such acceleration for the Random Reshuffling policy is familiar from the optimisation literature on stochastic gradient descent.

We tackle the problem of informative input design for system identification, where we select inputs, observe the corresponding outputs from the true system, and optimize the parameters of our model to best fit the data. We propose a methodology that is compatible with any system and parametric family of models. Our approach only requires input-output data from the system and first-order information from the model with respect to the parameters. Our algorithm consists of two modules. First, we formulate the problem of system identification from a Bayesian perspective and propose an approximate iterative method to optimize the model's parameters. Based on this Bayesian formulation, we are able to define a Gaussian-based uncertainty measure for the model parameters, which we can then minimize with respect to the next selected input. Our method outperforms model-free baselines with various linear and nonlinear dynamics.

Active Learning (AL) is a sequential learning approach aiming at selecting the most informative data for model training. In many systems, safety constraints appear during data evaluation, requiring the development of safe AL methods. Key challenges of AL are the repeated model training and acquisition optimization required for data selection, which become particularly restrictive under safety constraints. This repeated effort often creates a bottleneck, especially in physical systems requiring real-time decision-making. In this paper, we propose a novel amortized safe AL framework. By leveraging a pretrained neural network policy, our method eliminates the need for repeated model training and acquisition optimization, achieving substantial speed improvements while maintaining competitive learning outcomes and safety awareness. The policy is trained entirely on synthetic data utilizing a novel safe AL objective. The resulting policy is highly versatile and adapts to a wide range of systems, as we demonstrate in our experiments. Furthermore, our framework is modular and we empirically show that we also achieve superior performance for unconstrained time-sensitive AL tasks if we omit the safety requirement.