Bayesian Learning
Gaussian Process Volatility Model
Wu, Yue, Hernández-Lobato, José Miguel, Ghahramani, Zoubin
The prediction of time-changing variances is an important task in the modeling of financial data. Standard econometric models are often limited as they assume rigid functional relationships for the evolution of the variance. Moreover, functional parameters are usually learned by maximum likelihood, which can lead to overfitting. To address these problems we introduce GP-Vol, a novel non-parametric model for time-changing variances based on Gaussian Processes. This new model can capture highly flexible functional relationships for the variances.
A Framework for Testing Identifiability of Bayesian Models of Perception
Acerbi, Luigi, Ma, Wei Ji, Vijayakumar, Sethu
Bayesian observer models are very effective in describing human performance in perceptual tasks, so much so that they are trusted to faithfully recover hidden mental representations of priors, likelihoods, or loss functions from the data. However, the intrinsic degeneracy of the Bayesian framework, as multiple combinations of elements can yield empirically indistinguishable results, prompts the question of model identifiability. We propose a novel framework for a systematic testing of the identifiability of a significant class of Bayesian observer models, with practical applications for improving experimental design. We examine the theoretical identifiability of the inferred internal representations in two case studies. First, we show which experimental designs work better to remove the underlying degeneracy in a time interval estimation task.
General Table Completion using a Bayesian Nonparametric Model
Valera, Isabel, Ghahramani, Zoubin
Even though heterogeneous databases can be found in a broad variety of applications, there exists a lack of tools for estimating missing data in such databases. In this paper, we provide an efficient and robust table completion tool, based on a Bayesian nonparametric latent feature model. In particular, we propose a general observation model for the Indian buffet process (IBP) adapted to mixed continuous (real-valued and positive real-valued) and discrete (categorical, ordinal and count) observations. Then, we propose an inference algorithm that scales linearly with the number of observations. Finally, our experiments over five real databases show that the proposed approach provides more robust and accurate estimates than the standard IBP and the Bayesian probabilistic matrix factorization with Gaussian observations.
Multiscale Semi-Markov Dynamics for Intracortical Brain-Computer Interfaces
Milstein, Daniel, Pacheco, Jason, Hochberg, Leigh, Simeral, John D., Jarosiewicz, Beata, Sudderth, Erik
Intracortical brain-computer interfaces (iBCIs) have allowed people with tetraplegia to control a computer cursor by imagining the movement of their paralyzed arm or hand. State-of-the-art decoders deployed in human iBCIs are derived from a Kalman filter that assumes Markov dynamics on the angle of intended movement, and a unimodal dependence on intended angle for each channel of neural activity. Due to errors made in the decoding of noisy neural data, as a user attempts to move the cursor to a goal, the angle between cursor and goal positions may change rapidly. We propose a dynamic Bayesian network that includes the on-screen goal position as part of its latent state, and thus allows the person's intended angle of movement to be aggregated over a much longer history of neural activity. This multiscale model explicitly captures the relationship between instantaneous angles of motion and long-term goals, and incorporates semi-Markov dynamics for motion trajectories.
Synaptic Sampling: A Bayesian Approach to Neural Network Plasticity and Rewiring
Kappel, David, Habenschuss, Stefan, Legenstein, Robert, Maass, Wolfgang
We propose that inherent stochasticity enables synaptic plasticity to carry out probabilistic inference by sampling from a posterior distribution of synaptic parameters. This view provides a viable alternative to existing models that propose convergence of synaptic weights to maximum likelihood parameters. It explains how priors on weight distributions and connection probabilities can be merged optimally with learned experience. In simulations we show that our model for synaptic plasticity allows spiking neural networks to compensate continuously for unforeseen disturbances. Furthermore it provides a normative mathematical framework to better understand the permanent variability and rewiring observed in brain networks.
A Unified Approach for Learning the Parameters of Sum-Product Networks
Zhao, Han, Poupart, Pascal, Gordon, Geoffrey J.
We present a unified approach for learning the parameters of Sum-Product networks (SPNs). We prove that any complete and decomposable SPN is equivalent to a mixture of trees where each tree corresponds to a product of univariate distributions. Based on the mixture model perspective, we characterize the objective function when learning SPNs based on the maximum likelihood estimation (MLE) principle and show that the optimization problem can be formulated as a signomial program. We construct two parameter learning algorithms for SPNs by using sequential monomial approximations (SMA) and the concave-convex procedure (CCCP), respectively. The two proposed methods naturally admit multiplicative updates, hence effectively avoiding the projection operation.
Best of Both Worlds: Transferring Knowledge from Discriminative Learning to a Generative Visual Dialog Model
Lu, Jiasen, Kannan, Anitha, Yang, Jianwei, Parikh, Devi, Batra, Dhruv
We present a novel training framework for neural sequence models, particularly for grounded dialog generation. The standard training paradigm for these models is maximum likelihood estimation (MLE), or minimizing the cross-entropy of the human responses. Across a variety of domains, a recurring problem with MLE trained generative neural dialog models (G) is that they tend to produce'safe' and generic responses like "I don't know", "I can't tell"). In contrast, discriminative dialog models (D) that are trained to rank a list of candidate human responses outperform their generative counterparts; in terms of automatic metrics, diversity, and informativeness of the responses. However, D is not useful in practice since it can not be deployed to have real conversations with users. Our work aims to achieve the best of both worlds -- the practical usefulness of G and the strong performance of D -- via knowledge transfer from D to G. Our primary contribution is an end-to-end trainable generative visual dialog model, where G receives gradients from D as a perceptual (not adversarial) loss of the sequence sampled from G. We leverage the recently proposed Gumbel-Softmax (GS) approximation to the discrete distribution -- specifically, a RNN is augmented with a sequence of GS samplers, which coupled with the straight-through gradient estimator enables end-to-end differentiability.
Semi-Separable Hamiltonian Monte Carlo for Inference in Bayesian Hierarchical Models
Zhang, Yichuan, Sutton, Charles
Sampling from hierarchical Bayesian models is often difficult for MCMC methods, because of the strong correlations between the model parameters and the hyperparameters. Recent Riemannian manifold Hamiltonian Monte Carlo (RMHMC) methods have significant potential advantages in this setting, but are computationally expensive. We introduce a new RMHMC method, which we call semi-separable Hamiltonian Monte Carlo, which uses a specially designed mass matrix that allows the joint Hamiltonian over model parameters and hyperparameters to decompose into two simpler Hamiltonians. This structure is exploited by a new integrator which we call the alternating blockwise leapfrog algorithm. The resulting method can mix faster than simpler Gibbs sampling while being simpler and more efficient than previous instances of RMHMC.
Scan Order in Gibbs Sampling: Models in Which it Matters and Bounds on How Much
He, Bryan D., Sa, Christopher M. De, Mitliagkas, Ioannis, Ré, Christopher
Gibbs sampling is a Markov Chain Monte Carlo sampling technique that iteratively samples variables from their conditional distributions. There are two common scan orders for the variables: random scan and systematic scan. Due to the benefits of locality in hardware, systematic scan is commonly used, even though most statistical guarantees are only for random scan. While it has been conjectured that the mixing times of random scan and systematic scan do not differ by more than a logarithmic factor, we show by counterexample that this is not the case, and we prove that that the mixing times do not differ by more than a polynomial factor under mild conditions. To prove these relative bounds, we introduce a method of augmenting the state space to study systematic scan using conductance.
Bayesian Learning of Causal Relationships for System Reliability
Yu, Xuewen, Smith, Jim Q., Nichols, Linda
Concurrently advances in causal modelling has led to a better understanding of how to predict complex systems when these are subjected to control. A major breakthrough then occurred about 20 years ago when it was then discovered that causal and graphical modelling could be combined. This paper reports on how the combination of these two technologies are being applied to give more insights concerning causal hypotheses that relate specially to reliability and system safety. Of course causal ideas have been embedded within reliability theory for a long time, both to explore the reasons behind a failure and to also estimate the efficacy of various interventions in the system that might ameliorate adverse outcomes. However, the graphical frameworks around which these ideas appear have been tree like - for example fault trees or event chains (Leverson 2011) - rather than the most common graphical framework for analyzing causation: the BN. Only recently have graphical causal methods emerged for methodologies and algorithms to exist for causal discovery and causal reasoning on such tree structures. The primary such graph is the chain event graph (CEG), see Thwaites, Smith and Riccomagno (2010), Barclay, Hutton and Smith (2013) and Collazo et.