Evolutionary Systems
LaRes: Evolutionary Reinforcement Learning with LLM-based Adaptive Reward Search
The integration of evolutionary algorithms (EAs) with reinforcement learning (RL) has shown superior performance compared to standalone methods. However, previous research focuses on exploration in policy parameter space, while overlooking the reward function search. To bridge this gap, we propose LaRes, a novel hybrid framework that achieves efficient policy learning through reward function search. LaRes leverages large language models (LLMs) to generate the reward function population, guiding RL in policy learning. The reward functions are evaluated by the policy performance and improved through LLMs.
Ctrl-DNA: Controllable Cell-Type-Specific Regulatory DNADesign via Constrained RL
Designing regulatory DNA sequences that achieve precise cell-type-specific gene expression is crucial for advancements in synthetic biology, gene therapy and precision medicine. Although transformer-based language models (LMs) can effectively capture patterns in regulatory DNA, their generative approaches often struggle to produce novel sequences with reliable cell-type-specific activity. Here, we introduce Ctrl-DNA, a novel constrained reinforcement learning (RL) framework tailored for designing regulatory DNA sequences with controllable cell-type specificity. By formulating regulatory sequence design as a biologically informed constrained optimization problem, we apply RL to autoregressive genomic LMs, enabling the models to iteratively refine sequences that maximize regulatory activity in targeted cell types while constraining off-target effects. Our evaluation on human promoters and enhancers demonstrates that Ctrl-DNA consistently outperforms existing generative and RL-based approaches, generating high-fitness regulatory sequences and achieving state-of-the-art cell-type specificity. Moreover, Ctrl-DNA-generated sequences capture key cell-type-specific transcription factor binding sites (TFBS), short DNA motifs recognized by regulatory proteins that control gene expression, demonstrating the biological plausibility of the generated sequences.
Preference-Driven Multi-Objective Combinatorial Optimization with Conditional Computation
Recent deep reinforcement learning methods have achieved remarkable success in solving multi-objective combinatorial optimization problems (MOCOPs) by decomposing them into multiple subproblems, each associated with a specific weight vector. However, these methods typically treat all subproblems equally and solve them using a single model, hindering the effective exploration of the solution space and thus leading to suboptimal performance. To overcome the limitation, we propose POCCO, a novel plug-and-play framework that enables adaptive selection of model structures for subproblems, which are subsequently optimized based on preference signals rather than explicit reward values.
Structure-Aware Cooperative Ensemble Evolutionary Optimization on Combinatorial Problems with Multimodal Large Language Models
Evolutionary algorithms (EAs) have proven effective in exploring the vast solution spaces typical of graph-structured combinatorial problems. However, traditional encoding schemes, such as binary or numerical representations, often fail to straightforwardly capture the intricate structural properties of networks. Through employing the image-based encoding to preserve topological context, this study utilizes multimodal large language models (MLLMs) as evolutionary operators to facilitate structure-aware optimization over graph data. To address the visual clutter inherent in large-scale network visualizations, we leverage graph sparsification techniques to simplify structures while maintaining essential structural features. To further improve robustness and mitigate bias from different sparsification views, we propose a cooperative evolutionary optimization framework that facilitates cross-domain knowledge transfer and unifies multiple sparsified variants of diverse structures. Additionally, recognizing the sensitivity of MLLMs to network layout, we introduce an ensemble strategy that aggregates outputs from various layout configurations through consensus voting. Finally, experiments on real-world networks through various tasks demonstrate that our approach improves both the quality and reliability of solutions in MLLM-driven evolutionary optimization.
Fair Continuous Resource Allocation with Equality of Impact
Recent works have studied fair resource allocation in social settings, where fairness is judged by the impact of allocation decisions rather than more traditional minimum or maximum thresholds on the allocations themselves. Our work significantly adds to this literature by developing continuous resource allocation strategies that adhere to equality of impact, a generalization of equality of opportunity. We derive methods to maximize total welfare across groups subject to minimal violation of equality of impact, in settings where the outcomes of allocations are unknown but have a diminishing marginal effect. While focused on a two-group setting, our study addresses a broader class of welfare dynamics than explored in prior work.
ECO: Evolving Core Knowledge for Efficient Transfer
Knowledge in modern neural networks is often entangled and structurally opaque, making current transfer methods--typically based on reusing entire parameter sets--inefficient and inflexible. Efforts to improve flexibility by reusing partial parameters frequently depend on handcrafted heuristics or rigid structural assumptions, which constrain generalization. In contrast, biological evolution enables efficient knowledge transfer by encoding only essential information into genes through iterative refinement under environmental pressure.
Evolving and Detecting Multi-Turn Deception using Geometric Signatures
Kumar, Surender Suresh, Cummings, Mary L.
Safety defenses for large language models (LLMs) are typically trained and evaluated on single-turn prompts, yet real attacks often unfold as indirect, multi-turn probing. To defend against this more nuanced form of deception, we present a unified pipeline that generates realistic multi-turn deceptive question sets via multi-objective genetic prompt optimization with co-evolving mutation operators. We validate this dataset through a human study, which also revealed that early generations yielded the most convincing deception and practical constraints such as adherence filtering and ordering effects. Using this data, we were able to detect deceptive attempts to access prohibited information using simple, explainable geometric signals in embedding space coupled with a lightweight feed-forward classifier. Three geometric features (angular coverage, distance ratio, and linearity) augmented with pairwise similarity statistics led to a compact predictive model that achieved consistently high recall (0.89) across base, reworded, and truncated (three-turn) scenarios, with test-time F1 ranging from 0.74-0.86. The results support a central hypothesis that multi-turn deceptive intent leaves a stable geometric footprint that enables lightweight, transparent screening without expensive end-to-end training. We further discuss responsible uses, limitations, and paths toward larger, more diverse human-evaluated datasets. The primary contribution to artificial intelligence is the multi-objective evolutionary framework for prompt generation, and the engineering application is the deployment of a lightweight geometric detection system for LLM safety infrastructure.
Symbolic Density Estimation for Discrete Distributions
Discrete probability laws underpin statistical modeling, yet the catalog of interpretable distributions has expanded only gradually through centuries of case-by-case mathematical derivations. We introduce symbolic density estimation (SDE), an unsupervised framework that automatically recovers closed-form probability mass functions by composing elementary analytic operations within a structured search space. Our method integrates domain-specific structural priors with evolutionary search and a validity-aware inference stage, and it extends to richer distribution families such as zero inflation and finite mixtures. To support systematic evaluation and future research, we contribute a benchmark dataset spanning a broad collection of commonly used discrete distributions. The proposed algorithm recovers all benchmark families with accurate parameter estimates. A real data application shows that it identifies concise and interpretable mixture models that improve goodness-of-fit over standard models.
Guiding Multi-Objective Genetic Programming with Description Length Improves Symbolic Regression Solutions
Kronberger, Gabriel, de Franca, Fabricio Olivetti, Bartlett, Deaglan J., Desmond, Harry, Ferreira, Pedro G.
Symbolic regression with genetic programming (GPSR) may suffer from overfitting and structural bloat, especially when noise is present. In this paper we evaluate description length (DL) and fractional Bayes factor (FBF) criteria as principled, data-efficient alternatives to heuristics for selecting compact expressions that generalise well. We implement DL using a Fisher-information-based parameter encoding and compare it to AIC and BIC across multiple datasets, including noisy synthetic benchmarks and real-world regression problems. We study three search/selection strategies: (i) multi-objective search for accuracy and program length followed by DL/FBF selection; (ii) multi-objective search using DL directly as an objective; and (iii) single-objective optimisation with DL/FBF as the fitness. Across datasets we find that DL/FBF post-selection improves test performance compared to AIC/BIC baseline and that BIC in combination with the same function complexity penalty from DL/FBF produces similar results. In contrast, using DL/FBF directly as a fitness function in single-objective GPSR frequently induces premature convergence to overly simple models. We conclude with practical guidance for using DL/FBF as robust model-selection tools in genetic programming workflows.
To discretize continually: Mean shift interacting particle systems for Bayesian inference
Belhadji, Ayoub, Sharp, Daniel, Marzouk, Youssef M.
Integration against a probability distribution given its unnormalized density is a central task in Bayesian inference and other fields. We introduce new methods for approximating such expectations with a small set of weighted samples -- i.e., a quadrature rule -- constructed via an interacting particle system that minimizes maximum mean discrepancy (MMD) to the target distribution. These methods extend the classical mean shift algorithm, as well as recent algorithms for optimal quantization of empirical distributions, to the case of continuous distributions. Crucially, our approach creates dynamics for MMD minimization that are invariant to the unknown normalizing constant; they also admit both gradient-free and gradient-informed implementations. The resulting mean shift interacting particle systems converge quickly, capture anisotropy and multi-modality, avoid mode collapse, and scale to high dimensions. We demonstrate their performance on a wide range of benchmark sampling problems, including multi-modal mixtures, Bayesian hierarchical models, PDE-constrained inverse problems, and beyond.