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 Evolutionary Systems


Generating high-quality 3DMPCs by adaptive data acquisition and NeREF-based radiometric calibration with UGV plant phenotyping system

arXiv.org Artificial Intelligence

An efficient method for next-best-view (NBV) estimation with high accuracy in the case of the limited camera field of view (FOV) was proposed. Abstract: Fusion of three-dimensional (3D) and multispectral (MS) imaging data has a great potential for high-throughput plant phenotyping of structural and biochemical as well as physiological traits simultaneously, which is important for decision support in agriculture and for crop breeders in selecting the best genotypes. However, lacking of 3D data integrity of various plant canopy structures and low-quality of MS images caused by the complex illumination effects make a great challenge, especially at the proximal imaging scale. Therefore, this study proposed a novel approach for adaptive data acquisition and radiometric calibration to generate high-quality 3D multispectral point clouds (3DMPCs) of plants. An efficient next-best-view (NBV) planning method based on an unmanned ground vehicle (UGV) plant phenotyping system with a multisensor-equipped robotic arm was proposed to achieve adaptive data acquisition. The neural reference field (NeREF) was employed to predict the digital number (DN) values of the hemispherical reference for radiometric calibration. For NBV planning, the average total time for single plant at a joint speed of 1.55 rad/s was about 62.8 s, with an average reduction of 18.0% compared to the unplanned. The integrity of the wholeplant data was improved by an average of 23.6% compared to the fixed viewpoints alone. Compared with the ASD measurements, the average root mean square error (RMSE) of the reflectance spectra obtained from 3DMPCs at different regions of interest was 0.08 with an average decrease of 58.93% compared to the results obtained from the single-frame of MS images without 3D radiometric calibration. The 3Dcalibrated plant 3DMPCs improved the predictive accuracy of partial least squares regression (PLSR) for chlorophyll content, with an average increase of 0.07 in the coefficient of determination (R Our approach introduced a fresh perspective on generating high-quality 3DMPCs of plants under the natural light condition, enabling more precise analysis of plant morphological and physiological parameters. Keywords: adaptive data acquisition; 3DMPC; NBV planning; radiometric calibration; NeREF; chlorophyll content 1. Introduction High-throughput plant phenotyping provides an unprecedented way to systematically evaluate plant development and functionality with the precise quantification of morphological, physiological, biochemical, and performance traits over the whole growth period. It can help on decision support in agriculture, for ecological diversity studies, and for crop breeding in the selection of superior genotypes to improve crop performance, and thus revolutionize the agriculture and breeding strategies to meet the future need of agricultural sustainable development (Freschet et al. 2018; Hu and Schmidhalter 2023).


EpiTESTER: Testing Autonomous Vehicles with Epigenetic Algorithm and Attention Mechanism

arXiv.org Artificial Intelligence

Testing autonomous vehicles (AVs) under various environmental scenarios that lead the vehicles to unsafe situations is known to be challenging. Given the infinite possible environmental scenarios, it is essential to find critical scenarios efficiently. To this end, we propose a novel testing method, named EpiTESTER, by taking inspiration from epigenetics, which enables species to adapt to sudden environmental changes. In particular, EpiTESTER adopts gene silencing as its epigenetic mechanism, which regulates gene expression to prevent the expression of a certain gene, and the probability of gene expression is dynamically computed as the environment changes. Given different data modalities (e.g., images, lidar point clouds) in the context of AV, EpiTESTER benefits from a multi-model fusion transformer to extract high-level feature representations from environmental factors and then calculates probabilities based on these features with the attention mechanism. To assess the cost-effectiveness of EpiTESTER, we compare it with a classical genetic algorithm (GA) (i.e., without any epigenetic mechanism implemented) and EpiTESTER with equal probability for each gene. We evaluate EpiTESTER with four initial environments from CARLA, an open-source simulator for autonomous driving research, and an end-to-end AV controller, Interfuser. Our results show that EpiTESTER achieved a promising performance in identifying critical scenarios compared to the baselines, showing that applying epigenetic mechanisms is a good option for solving practical problems.


A data-science pipeline to enable the Interpretability of Many-Objective Feature Selection

arXiv.org Artificial Intelligence

Many-Objective Feature Selection (MOFS) approaches use four or more objectives to determine the relevance of a subset of features in a supervised learning task. As a consequence, MOFS typically returns a large set of non-dominated solutions, which have to be assessed by the data scientist in order to proceed with the final choice. Given the multi-variate nature of the assessment, which may include criteria (e.g. fairness) not related to predictive accuracy, this step is often not straightforward and suffers from the lack of existing tools. For instance, it is common to make use of a tabular presentation of the solutions, which provide little information about the trade-offs and the relations between criteria over the set of solutions. This paper proposes an original methodology to support data scientists in the interpretation and comparison of the MOFS outcome by combining post-processing and visualisation of the set of solutions. The methodology supports the data scientist in the selection of an optimal feature subset by providing her with high-level information at three different levels: objectives, solutions, and individual features. The methodology is experimentally assessed on two feature selection tasks adopting a GA-based MOFS with six objectives (number of selected features, balanced accuracy, F1-Score, variance inflation factor, statistical parity, and equalised odds). The results show the added value of the methodology in the selection of the final subset of features.


DQSSA: A Quantum-Inspired Solution for Maximizing Influence in Online Social Networks (Student Abstract)

arXiv.org Artificial Intelligence

Influence Maximization is the task of selecting optimal nodes maximising the influence spread in social networks. This study proposes a Discretized Quantum-based Salp Swarm Algorithm (DQSSA) for optimizing influence diffusion in social networks. By discretizing meta-heuristic algorithms and infusing them with quantum-inspired enhancements, we address issues like premature convergence and low efficacy. The proposed method, guided by quantum principles, offers a promising solution for Influence Maximisation. Experiments on four real-world datasets reveal DQSSA's superior performance as compared to established cutting-edge algorithms.


A PSO Based Method to Generate Actionable Counterfactuals for High Dimensional Data

arXiv.org Artificial Intelligence

Counterfactual explanations (CFE) are methods that explain a machine learning model by giving an alternate class prediction of a data point with some minimal changes in its features. It helps the users to identify their data attributes that caused an undesirable prediction like a loan or credit card rejection. We describe an efficient and an actionable counterfactual (CF) generation method based on particle swarm optimization (PSO). We propose a simple objective function for the optimization of the instance-centric CF generation problem. The PSO brings in a lot of flexibility in terms of carrying out multi-objective optimization in large dimensions, capability for multiple CF generation, and setting box constraints or immutability of data attributes. An algorithm is proposed that incorporates these features and it enables greater control over the proximity and sparsity properties over the generated CFs. The proposed algorithm is evaluated with a set of action-ability metrics in real-world datasets, and the results were superior compared to that of the state-of-the-arts.


Leveraging Hyperbolic Embeddings for Coarse-to-Fine Robot Design

arXiv.org Artificial Intelligence

Multi-cellular robot design aims to create robots comprised of numerous cells that can be efficiently controlled to perform diverse tasks. Previous research has demonstrated the ability to generate robots for various tasks, but these approaches often optimize robots directly in the vast design space, resulting in robots with complicated morphologies that are hard to control. In response, this paper presents a novel coarse-to-fine method for designing multi-cellular robots. Initially, this strategy seeks optimal coarse-grained robots and progressively refines them. To mitigate the challenge of determining the precise refinement juncture during the coarse-to-fine transition, we introduce the Hyperbolic Embeddings for Robot Design (HERD) framework. HERD unifies robots of various granularity within a shared hyperbolic space and leverages a refined Cross-Entropy Method for optimization. This framework enables our method to autonomously identify areas of exploration in hyperbolic space and concentrate on regions demonstrating promise. Finally, the extensive empirical studies on various challenging tasks sourced from EvoGym show our approach's superior efficiency and generalization capability.


Swarm Synergy: A Silent Way of Forming Community

arXiv.org Artificial Intelligence

In this paper, we introduce a novel swarm application, swarm synergy, where robots in a swarm intend to form communities. Each robot is considered to make independent decisions without any communication capability (silent agent). The proposed algorithm is based on parameters local to individual robots. Engaging scenarios are studied where the silent robots form communities without the preset conditions on the number of communities, community size, goal location of each community, and specific members in the community. Our approach allows silent robots to achieve this self-organized swarm behavior using only sensory inputs from the environment. The algorithm facilitates the formation of multiple swarm communities at arbitrary locations with unspecified goal locations. We further infer the behavior of swarm synergy to ensure the anonymity/untraceability of both robots and communities. The robots intend to form a community by sensing the neighbors, creating synergy in a bounded environment. The time to achieve synergy depends on the environment boundary and the onboard sensor's field of view. Compared to the state-of-art with similar objectives, the proposed communication-free swarm synergy shows comparative time to synergize with untraceability features.


Comparison of metaheuristics for the firebreak placement problem: a simulation-based optimization approach

arXiv.org Artificial Intelligence

The problem of firebreak placement is crucial for fire prevention, and its effectiveness at landscape scale will depend on their ability to impede the progress of future wildfires. To provide an adequate response, it is therefore necessary to consider the stochastic nature of fires, which are highly unpredictable from ignition to extinction. Thus, the placement of firebreaks can be considered a stochastic optimization problem where: (1) the objective function is to minimize the expected cells burnt of the landscape; (2) the decision variables being the location of firebreaks; and (3) the random variable being the spatial propagation/behavior of fires. In this paper, we propose a solution approach for the problem from the perspective of simulation-based optimization (SbO), where the objective function is not available (a black-box function), but can be computed (and/or approximated) by wildfire simulations. For this purpose, Genetic Algorithm and GRASP are implemented. The final implementation yielded favorable results for the Genetic Algorithm, demonstrating strong performance in scenarios with medium to high operational capacity, as well as medium levels of stochasticity


Uncertainty Quantification in Neural-Network Based Pain Intensity Estimation

arXiv.org Artificial Intelligence

Improper pain management can lead to severe physical or mental consequences, including suffering, and an increased risk of opioid dependency. Assessing the presence and severity of pain is imperative to prevent such outcomes and determine the appropriate intervention. However, the evaluation of pain intensity is challenging because different individuals experience pain differently. To overcome this, researchers have employed machine learning models to evaluate pain intensity objectively. However, these efforts have primarily focused on point estimation of pain, disregarding the inherent uncertainty and variability present in the data and model. Consequently, the point estimates provide only partial information for clinical decision-making. This study presents a neural network-based method for objective pain interval estimation, incorporating uncertainty quantification. This work explores three algorithms: the bootstrap method, lower and upper bound estimation (LossL) optimized by genetic algorithm, and modified lower and upper bound estimation (LossS) optimized by gradient descent algorithm. Our empirical results reveal that LossS outperforms the other two by providing a narrower prediction interval. As LossS outperforms, we assessed its performance in three different scenarios for pain assessment: (1) a generalized approach (single model for the entire population), (2) a personalized approach (separate model for each individual), and (3) a hybrid approach (separate model for each cluster of individuals). Our findings demonstrate the hybrid approach's superior performance, with notable practicality in clinical contexts. It has the potential to be a valuable tool for clinicians, enabling objective pain intensity assessment while taking uncertainty into account. This capability is crucial in facilitating effective pain management and reducing the risks associated with improper treatment.


An Efficient High-Dimensional Gene Selection Approach based on Binary Horse Herd Optimization Algorithm for Biological Data Classification

arXiv.org Artificial Intelligence

Abstract: The Horse Herd Optimization Algorithm (HOA) is a new meta-heuristic algorithm based on the behaviors of horses at different ages. The HOA was introduced recently to solve complex and high-dimensional problems. This paper proposes a binary version of the Horse Herd Optimization Algorithm (BHOA) in order to solve discrete problems and select prominent feature subsets. Moreover, this study provides a novel hybrid feature selection framework based on the BHOA and a minimum Redundancy Maximum Relevance (MRMR) filter method. This hybrid feature selection, which is more computationally efficient, produces a beneficial subset of relevant and informative features. Since feature selection is a binary problem, we have applied a new Transfer Function (TF), called X-shape TF, which transforms continuous problems into binary search spaces. Furthermore, the Support Vector Machine (SVM) is utilized to examine the efficiency of the proposed method on ten microarray datasets, namely Lymphoma, Prostate, Brain-1, DLBCL, SRBCT, Leukemia, Ovarian, Colon, Lung, and MLL. In comparison to other state-of-the-art, such as the Gray Wolf (GW), Particle Swarm Optimization (PSO), and Genetic Algorithm (GA), the proposed hybrid method (MRMR-BHOA) demonstrates superior performance in terms of accuracy and minimum selected features. Also, experimental results prove that the X-Shaped BHOA approach outperforms others methods. Introduction In recent years, many researchers have used DNA microarray datasets to analyze thousands of genes simultaneously and correlate their expression with clinical phenotypes in cancer research [1, 2]. Since the microarray dataset contains numerous redundant genes and a limited number of instances, the feature selection technique could be crucial for choosing informative genes [3]. Feature Selection (FS) should be applied in machine learning as a pre-processing phase in order to get optimal output with short training times and low memory consumption [4]. FS plays a significant role in data mining [5] to solve various problems such as data classification[6], data clustering [7], image processing [8], text clustering [9], disaster management [10], and disease forecasting [11]. FS is generally classified into three major groups based on a variety of evaluation criteria, i.e., filter method [12], wrapper model [13], and embedded technique [14]. Also, this technique uses statistical methods for the evaluation of a subset of features [15].