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 Evolutionary Systems





Differential Dynamic Causal Nets: Model Construction, Identification and Group Comparisons

arXiv.org Machine Learning

Pathophysiolpgical modelling of brain systems from microscale to macroscale remains difficult in group comparisons partly because of the infeasibility of modelling the interactions of thousands of neurons at the scales involved. Here, to address the challenge, we present a novel approach to construct differential causal networks directly from electroencephalogram (EEG) data. The proposed network is based on conditionally coupled neuronal circuits which describe the average behaviour of interacting neuron populations that contribute to observed EEG data. In the network, each node represents a parameterised local neural system while directed edges stand for node-wise connections with transmission parameters. The network is hierarchically structured in the sense that node and edge parameters are varying in subjects but follow a mixed-effects model. A novel evolutionary optimisation algorithm for parameter inference in the proposed method is developed using a loss function derived from Chen-Fliess expansions of stochastic differential equations. The method is demonstrated by application to the fitting of coupled Jansen-Rit local models. The performance of the proposed method is evaluated on both synthetic and real EEG data. In the real EEG data analysis, we track changes in the parameters that characterise dynamic causality within brains that demonstrate epileptic activity. We show evidence of network functional disruptions, due to imbalance of excitatory-inhibitory interneurons and altered epileptic brain connectivity, before and during seizure periods.


Fairness-informed Pareto Optimization : An Efficient Bilevel Framework

arXiv.org Machine Learning

Despite their promise, fair machine learning methods often yield Pareto-inefficient models, in which the performance of certain groups can be improved without degrading that of others. This issue arises frequently in traditional in-processing approaches such as fairness-through-regularization. In contrast, existing Pareto-efficient approaches are biased towards a certain perspective on fairness and fail to adapt to the broad range of fairness metrics studied in the literature. In this paper, we present BADR, a simple framework to recover the optimal Pareto-efficient model for any fairness metric. Our framework recovers its models through a Bilevel Adaptive Rescalarisation procedure. The lower level is a weighted empirical risk minimization task where the weights are a convex combination of the groups, while the upper level optimizes the chosen fairness objective. We equip our framework with two novel large-scale, single-loop algorithms, BADR-GD and BADR-SGD, and establish their convergence guarantees. We release badr, an open-source Python toolbox implementing our framework for a variety of learning tasks and fairness metrics. Finally, we conduct extensive numerical experiments demonstrating the advantages of BADR over existing Pareto-efficient approaches to fairness.


Ontology Neural Networks for Topologically Conditioned Constraint Satisfaction

arXiv.org Machine Learning

Abstract--Neuro-symbolic reasoning systems face fundamental challenges in maintaining semantic coherence while satisfying physical and logical constraints. Building upon our previous work on Ontology Neural Networks, we present an enhanced framework that integrates topological conditioning with gradient stabilization mechanisms. The approach employs Forman-Ricci curvature to capture graph topology, Deep Delta Learning for stable rank-one perturbations during constraint projection, and Covariance Matrix Adaptation Evolution Strategy for parameter optimization. Experimental evaluation across multiple problem sizes demonstrates that the method achieves mean energy reduction to 1.15 compared to baseline values of 11.68, with 95 percent success rate in constraint satisfaction tasks. The framework exhibits seed-independent convergence and graceful scaling behavior up to twenty-node problems, suggesting that topological structure can inform gradient-based optimization without sacrificing interpretability or computational efficiency. Integrating symbolic reasoning with neural learning remains a central challenge in artificial intelligence. While neural networks excel at pattern recognition and gradient-based optimization, they often struggle to maintain explicit constraints or provide interpretable intermediate representations. The opacity of deep neural representations makes it difficult to verify whether learned policies respect domain knowledge or physical laws. Conversely, symbolic systems offer logical transparency and formal guarantees but lack the flexibility to learn from noisy, incomplete data or adapt to distributional shifts.




A Unified Framework for Deep Symbolic Regression

Neural Information Processing Systems

The last few years have witnessed a surge in methods for symbolic regression, from advances in traditional evolutionary approaches to novel deep learning-based systems. Individual works typically focus on advancing the state-of-the-art for one particular class of solution strategies, and there have been few attempts to investigate the benefits of hybridizing or integrating multiple strategies. In this work, we identify five classes of symbolic regression solution strategies---recursive problem simplification, neural-guided search, large-scale pre-training, genetic programming, and linear models---and propose a strategy to hybridize them into a single modular, unified symbolic regression framework. Based on empirical evaluation using SRBench, a new community tool for benchmarking symbolic regression methods, our unified framework achieves state-of-the-art performance in its ability to (1) symbolically recover analytical expressions, (2) fit datasets with high accuracy, and (3) balance accuracy-complexity trade-offs, across 252 ground-truth and black-box benchmark problems, in both noiseless settings and across various noise levels. Finally, we provide practical use case-based guidance for constructing hybrid symbolic regression algorithms, supported by extensive, combinatorial ablation studies.


Analogous to Evolutionary Algorithm: Designing a Unified Sequence Model

Neural Information Processing Systems

Inspired by biological evolution, we explain the rationality of Vision Transformer by analogy with the proven practical Evolutionary Algorithm (EA) and derive that both of them have consistent mathematical representation. Analogous to the dynamic local population in EA, we improve the existing transformer structure and propose a more efficient EAT model, and design task-related heads to deal with different tasks more flexibly. Moreover, we introduce the spatial-filling curve into the current vision transformer to sequence image data into a uniform sequential format. Thus we can design a unified EAT framework to address multi-modal tasks, separating the network architecture from the data format adaptation. Our approach achieves state-of-the-art results on the ImageNet classification task compared with recent vision transformer works while having smaller parameters and greater throughput. We further conduct multi-modal tasks to demonstrate the superiority of the unified EAT, \eg, Text-Based Image Retrieval, and our approach improves the rank-1 by +3.7 points over the baseline on the CSS dataset.