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Report 77 24 Computer Assisted Analysis of the High Stanford K S L Resolution Mass Spectra of Antibiotics . Kent Dennis H
The high resolutioa mass spectra of five 12-membered macrolide aglycones related to methynolide were analyzed with the aid of the Meta-DENDRAL subprogram INTSUM. Metastable defocusing data obtained for several prominent ions in the spectra of two of these mpounds support stepwise cleavage processes subsequent to initial ring opening. Their behavior in the mass spectrometer proved to be highly dependent on the substituents present and their location on the macrocyclic ring. A series of empirical mass spectral fragmentation rules, which were derived from these data, proved useful in differentiating between the mass spectra of closely related isomeric structures. These rules were also useful in the analysis of the fragmentation patterns of several 14-and 16-membered macrolide aglycones. I. INTRODUCTION The non-polyene macrolide antibiotics are a class of medically important compounds characterized by a macrocyclic lactone system containing not more than two conjugated double bonds.
Report 77 23 Generalized Modes . Stanford James G. 1977
Reprinted with permission from the Journal of the American Chemical Society, Vol.99,No.7,pp.2063-2069. Abstract: A stereoisomerizat ion mode can be defined as a set of symmetry equivalent degenerate rearrangements of a molecular skeleton. The key mathematical constructions in this definition are the double cosets of the skeletal point group in some larger permutation group of identically substituted skeletal sites. S,,L x S.s. is defined which includes all permutations which act on ligand and site labels separately. The generalized stereoisomerization modes are found to be collections of double cosets in this group.
APPLICATION OF THE CONTRACT NET PROTOCOL TO DISTRIBUTED DATABASES Hector Garcia-nolina and Gio Uiederhold 1 Department of Computer Science Stanford University Stanford, California, 94305
Each computing facility, which we will call a node, includes a process which is in charge of the management of some section of the data base. Each node is connected to the other nodes to allow the sharing of data. We will assume that there is neither shared memory nor global data in the system. Except for this restriction, our model will not specify the interconnection architecture of the network. Au important objective of our studies is in fact the development of measures of computational activities which will lead to evaluation criteria for architectural alternatives [10].
GRETCHEN M. SCHWENZER and TOM M. MITCHELL Department of Computer Science, Stanford University, Stanford, CA94305
Report 77-20 Computer Assisted Structure Elucidation Using Stanford KSL Automatically Acquired 13C NMR Rules. Computer-Assisted Structure Elucidation Using Automatically Acquired '3C NMR Rules Carbon-13 nuclear magnetic resonance (CMR) has developed into an important tool for the structural chemist. A CMR spectrum exhibits a wide range of shifts which have been shown to have a strong correlation with structure(1 2). A natural abundance CMR spectrum which is fully proton decoupled consists of a number of sharp peaks which correspond to the resonance frequencies in an applied magnetic field of the various types of carbon atoms present. A C-13 shift is the amount an observed peak is shifted from that of a reference peak, usually tetramethylsilane (TMS). Molecular structure elucidation using CMR consists of establishing a set of rules which summarize the CMR behavior for a set of compounds and then using the rules to identify unknown compounds. In the traditional approach to structure elucidation using CMR the chemist forms a set of empirical rules by sorting through a large amount of data looking for correlations between structural arrangements in the molecuies and the observed C-13 shift. The total shift is then given as a function of these structural parameters. The functional fort, is usually chosen to be a linear combination of independent parameters. The optimized value of the coefficient of each structural parameter is obtained by a curve fitting procedure.
Report 77-15 A Correlation between Crystallographic
Crystallographers have been fascinated by computing The problem of deriving the coordinates for a trial devices for many years and have done much pioneering protein structure, given an electron density map, the work in the design and utilization of such devices for amino-acid sequence and the stereochemical principles crystallographic research. Machines such as the 1948 and constraints known to apply, is one which currently analogue Fourier summation device X-RAC (Pepinsky.
Report 77-13 Version Spaces: A Candidate Elimination S gr
A candidate elimination algorithm has been shown whicn will find all rule versions consistent with all training instances. Backtracking is not required for noise-free training instances, and the final result is independent of the order of presentation of instances. Version spaces provide at once a compact summary of past training instances and a representation of all plausible rule versions. Pecause they provide an explicit representation for the space of plausible rules, version spaces allow a program to represent "how much it doesn't know" about the correct form of the rule. This suggests the utility of the version space approach to problems such as intelligent selection of training instances and merging sets of independently generated rules.