South America
On Evaluating and Mitigating Gender Biases in Multilingual Settings
Vashishtha, Aniket, Ahuja, Kabir, Sitaram, Sunayana
While understanding and removing gender biases in language models has been a long-standing problem in Natural Language Processing, prior research work has primarily been limited to English. In this work, we investigate some of the challenges with evaluating and mitigating biases in multilingual settings which stem from a lack of existing benchmarks and resources for bias evaluation beyond English especially for non-western context. In this paper, we first create a benchmark for evaluating gender biases in pre-trained masked language models by extending DisCo to different Indian languages using human annotations. We extend various debiasing methods to work beyond English and evaluate their effectiveness for SOTA massively multilingual models on our proposed metric. Overall, our work highlights the challenges that arise while studying social biases in multilingual settings and provides resources as well as mitigation techniques to take a step toward scaling to more languages.
Distance Functions and Normalization Under Stream Scenarios
Barboza, Eduardo V. L., de Almeida, Paulo R. Lisboa, Britto, Alceu de Souza Jr, Cruz, Rafael M. O.
Data normalization is an essential task when modeling a classification system. When dealing with data streams, data normalization becomes especially challenging since we may not know in advance the properties of the features, such as their minimum/maximum values, and these properties may change over time. We compare the accuracies generated by eight well-known distance functions in data streams without normalization, normalized considering the statistics of the first batch of data received, and considering the previous batch received. We argue that experimental protocols for streams that consider the full stream as normalized are unrealistic and can lead to biased and poor results. Our results indicate that using the original data stream without applying normalization, and the Canberra distance, can be a good combination when no information about the data stream is known beforehand.
ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
Xu, Minghao, Yuan, Xinyu, Miret, Santiago, Tang, Jian
Current protein language models (PLMs) learn protein representations mainly based on their sequences, thereby well capturing co-evolutionary information, but they are unable to explicitly acquire protein functions, which is the end goal of protein representation learning. Fortunately, for many proteins, their textual property descriptions are available, where their various functions are also described. Motivated by this fact, we first build the ProtDescribe dataset to augment protein sequences with text descriptions of their functions and other important properties. Based on this dataset, we propose the ProtST framework to enhance Protein Sequence pre-training and understanding by biomedical Texts. During pre-training, we design three types of tasks, i.e., unimodal mask prediction, multimodal representation alignment and multimodal mask prediction, to enhance a PLM with protein property information with different granularities and, at the same time, preserve the PLM's original representation power. On downstream tasks, ProtST enables both supervised learning and zero-shot prediction. We verify the superiority of ProtST-induced PLMs over previous ones on diverse representation learning benchmarks. Under the zero-shot setting, we show the effectiveness of ProtST on zero-shot protein classification, and ProtST also enables functional protein retrieval from a large-scale database without any function annotation.
ReactIE: Enhancing Chemical Reaction Extraction with Weak Supervision
Zhong, Ming, Ouyang, Siru, Jiang, Minhao, Hu, Vivian, Jiao, Yizhu, Wang, Xuan, Han, Jiawei
Structured chemical reaction information plays a vital role for chemists engaged in laboratory work and advanced endeavors such as computer-aided drug design. Despite the importance of extracting structured reactions from scientific literature, data annotation for this purpose is cost-prohibitive due to the significant labor required from domain experts. Consequently, the scarcity of sufficient training data poses an obstacle to the progress of related models in this domain. In this paper, we propose ReactIE, which combines two weakly supervised approaches for pre-training. Our method utilizes frequent patterns within the text as linguistic cues to identify specific characteristics of chemical reactions. Additionally, we adopt synthetic data from patent records as distant supervision to incorporate domain knowledge into the model. Experiments demonstrate that ReactIE achieves substantial improvements and outperforms all existing baselines.
Exploring Randomly Wired Neural Networks for Climate Model Emulation
Yik, William, Silva, Sam J., Geiss, Andrew, Watson-Parris, Duncan
Exploring the climate impacts of various anthropogenic emissions scenarios is key to making informed decisions for climate change mitigation and adaptation. State-of-the-art Earth system models can provide detailed insight into these impacts, but have a large associated computational cost on a per-scenario basis. This large computational burden has driven recent interest in developing cheap machine learning models for the task of climate model emulation. In this manuscript, we explore the efficacy of randomly wired neural networks for this task. We describe how they can be constructed and compare them to their standard feedforward counterparts using the ClimateBench dataset. Specifically, we replace the serially connected dense layers in multilayer perceptrons, convolutional neural networks, and convolutional long short-term memory networks with randomly wired dense layers and assess the impact on model performance for models with 1 million and 10 million parameters. We find that models with less complex architectures see the greatest performance improvement with the addition of random wiring (up to 30.4% for multilayer perceptrons). Furthermore, out of 24 different model architecture, parameter count, and prediction task combinations, only one saw a statistically significant performance deficit in randomly wired networks compared to their standard counterparts, with 14 cases showing statistically significant improvement. We also find no significant difference in prediction speed between networks with standard feedforward dense layers and those with randomly wired layers. These findings indicate that randomly wired neural networks may be suitable direct replacements for traditional dense layers in many standard models.
Metrics to guide development of machine learning algorithms for malaria diagnosis
Delahunt, Charles B., Gachuhi, Noni, Horning, Matthew P.
Automated malaria diagnosis is a difficult but high-value target for machine learning (ML), and effective algorithms could save many thousands of children's lives. However, current ML efforts largely neglect crucial use case constraints and are thus not clinically useful. Two factors in particular are crucial to developing algorithms translatable to clinical field settings: (i) Clear understanding of the clinical needs that ML solutions must accommodate; and (ii) task-relevant metrics for guiding and evaluating ML models. Neglect of these factors has seriously hampered past ML work on malaria, because the resulting algorithms do not align with clinical needs. In this paper we address these two issues in the context of automated malaria diagnosis via microscopy on Giemsa-stained blood films. First, we describe why domain expertise is crucial to effectively apply ML to malaria, and list technical documents and other resources that provide this domain knowledge. Second, we detail performance metrics tailored to the clinical requirements of malaria diagnosis, to guide development of ML models and evaluate model performance through the lens of clinical needs (versus a generic ML lens). We highlight the importance of a patient-level perspective, interpatient variability, false positive rates, limit of detection, and different types of error. We also discuss reasons why ROC curves, AUC, and F1, as commonly used in ML work, are poorly suited to this context. These findings also apply to other diseases involving parasite loads, including neglected tropical diseases (NTDs) such as schistosomiasis.
Surgical fine-tuning for Grape Bunch Segmentation under Visual Domain Shifts
Chiatti, Agnese, Bertoglio, Riccardo, Catalano, Nico, Gatti, Matteo, Matteucci, Matteo
Mobile robots will play a crucial role in the transition towards sustainable agriculture. To autonomously and effectively monitor the state of plants, robots ought to be equipped with visual perception capabilities that are robust to the rapid changes that characterise agricultural settings. In this paper, we focus on the challenging task of segmenting grape bunches from images collected by mobile robots in vineyards. In this context, we present the first study that applies surgical fine-tuning to instance segmentation tasks. We show how selectively tuning only specific model layers can support the adaptation of pre-trained Deep Learning models to newly-collected grape images that introduce visual domain shifts, while also substantially reducing the number of tuned parameters.
Can We Trust AI-Generated Educational Content? Comparative Analysis of Human and AI-Generated Learning Resources
Denny, Paul, Khosravi, Hassan, Hellas, Arto, Leinonen, Juho, Sarsa, Sami
As an increasing number of students move to online learning platforms that deliver personalized learning experiences, there is a great need for the production of high-quality educational content. Large language models (LLMs) appear to offer a promising solution to the rapid creation of learning materials at scale, reducing the burden on instructors. In this study, we investigated the potential for LLMs to produce learning resources in an introductory programming context, by comparing the quality of the resources generated by an LLM with those created by students as part of a learnersourcing activity. Using a blind evaluation, students rated the correctness and helpfulness of resources generated by AI and their peers, after both were initially provided with identical exemplars. Our results show that the quality of AI-generated resources, as perceived by students, is equivalent to the quality of resources generated by their peers. This suggests that AI-generated resources may serve as viable supplementary material in certain contexts. Resources generated by LLMs tend to closely mirror the given exemplars, whereas student-generated resources exhibit greater variety in terms of content length and specific syntax features used. The study highlights the need for further research exploring different types of learning resources and a broader range of subject areas, and understanding the long-term impact of AI-generated resources on learning outcomes.
Knowledge-Driven Robot Program Synthesis from Human VR Demonstrations
Alt, Benjamin, Kenfack, Franklin Kenghagho, Haidu, Andrei, Katic, Darko, Jäkel, Rainer, Beetz, Michael
Aging societies, labor shortages and increasing wage costs call for assistance robots capable of autonomously performing a wide array of real-world tasks. Such open-ended robotic manipulation requires not only powerful knowledge representations and reasoning (KR&R) algorithms, but also methods for humans to instruct robots what tasks to perform and how to perform them. In this paper, we present a system for automatically generating executable robot control programs from human task demonstrations in virtual reality (VR). We leverage common-sense knowledge and game engine-based physics to semantically interpret human VR demonstrations, as well as an expressive and general task representation and automatic path planning and code generation, embedded into a state-of-the-art cognitive architecture. We demonstrate our approach in the context of force-sensitive fetch-and-place for Figure 1: We propose a knowledge-driven approach to convert human a robotic shopping assistant.
Interpretable Symbolic Regression for Data Science: Analysis of the 2022 Competition
de Franca, F. O., Virgolin, M., Kommenda, M., Majumder, M. S., Cranmer, M., Espada, G., Ingelse, L., Fonseca, A., Landajuela, M., Petersen, B., Glatt, R., Mundhenk, N., Lee, C. S., Hochhalter, J. D., Randall, D. L., Kamienny, P., Zhang, H., Dick, G., Simon, A., Burlacu, B., Kasak, Jaan, Machado, Meera, Wilstrup, Casper, La Cava, W. G.
Symbolic regression searches for analytic expressions that accurately describe studied phenomena. The main attraction of this approach is that it returns an interpretable model that can be insightful to users. Historically, the majority of algorithms for symbolic regression have been based on evolutionary algorithms. However, there has been a recent surge of new proposals that instead utilize approaches such as enumeration algorithms, mixed linear integer programming, neural networks, and Bayesian optimization. In order to assess how well these new approaches behave on a set of common challenges often faced in real-world data, we hosted a competition at the 2022 Genetic and Evolutionary Computation Conference consisting of different synthetic and real-world datasets which were blind to entrants. For the real-world track, we assessed interpretability in a realistic way by using a domain expert to judge the trustworthiness of candidate models.We present an in-depth analysis of the results obtained in this competition, discuss current challenges of symbolic regression algorithms and highlight possible improvements for future competitions.