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EGraFFBench: Evaluation of Equivariant Graph Neural Network Force Fields for Atomistic Simulations

arXiv.org Artificial Intelligence

Equivariant graph neural networks force fields (EGraFFs) have shown great promise in modelling complex interactions in atomic systems by exploiting the graphs' inherent symmetries. Recent works have led to a surge in the development of novel architectures that incorporate equivariance-based inductive biases alongside architectural innovations like graph transformers and message passing to model atomic interactions. However, thorough evaluations of these deploying EGraFFs for the downstream task of real-world atomistic simulations, is lacking. To this end, here we perform a systematic benchmarking of 6 EGraFF algorithms (NequIP, Allegro, BOTNet, MACE, Equiformer, TorchMDNet), with the aim of understanding their capabilities and limitations for realistic atomistic simulations. In addition to our thorough evaluation and analysis on eight existing datasets based on the benchmarking literature, we release two new benchmark datasets, propose four new metrics, and three challenging tasks. The new datasets and tasks evaluate the performance of EGraFF to out-of-distribution data, in terms of different crystal structures, temperatures, and new molecules. Interestingly, evaluation of the EGraFF models based on dynamic simulations reveals that having a lower error on energy or force does not guarantee stable or reliable simulation or faithful replication of the atomic structures. Moreover, we find that no model clearly outperforms other models on all datasets and tasks. Importantly, we show that the performance of all the models on out-of-distribution datasets is unreliable, pointing to the need for the development of a foundation model for force fields that can be used in real-world simulations. In summary, this work establishes a rigorous framework for evaluating machine learning force fields in the context of atomic simulations and points to open research challenges within this domain.


Think-on-Graph: Deep and Responsible Reasoning of Large Language Model on Knowledge Graph

arXiv.org Artificial Intelligence

Although large language models (LLMs) have achieved significant success in various tasks, they often struggle with hallucination problems, especially in scenarios requiring deep and responsible reasoning. These issues could be partially addressed by introducing external knowledge graphs (KG) in LLM reasoning. In this paper, we propose a new LLM-KG integrating paradigm ``$\hbox{LLM}\otimes\hbox{KG}$'' which treats the LLM as an agent to interactively explore related entities and relations on KGs and perform reasoning based on the retrieved knowledge. We further implement this paradigm by introducing a new approach called Think-on-Graph (ToG), in which the LLM agent iteratively executes beam search on KG, discovers the most promising reasoning paths, and returns the most likely reasoning results. We use a number of well-designed experiments to examine and illustrate the following advantages of ToG: 1) compared with LLMs, ToG has better deep reasoning power; 2) ToG has the ability of knowledge traceability and knowledge correctability by leveraging LLMs reasoning and expert feedback; 3) ToG provides a flexible plug-and-play framework for different LLMs, KGs and prompting strategies without any additional training cost; 4) the performance of ToG with small LLM models could exceed large LLM such as GPT-4 in certain scenarios and this reduces the cost of LLM deployment and application. As a training-free method with lower computational cost and better generality, ToG achieves overall SOTA in 6 out of 9 datasets where most previous SOTAs rely on additional training.


ReLU to the Rescue: Improve Your On-Policy Actor-Critic with Positive Advantages

arXiv.org Artificial Intelligence

This paper introduces an effective and practical step toward approximate Bayesian inference in on-policy actor-critic deep reinforcement learning. This step manifests as three simple modifications to the Asynchronous Advantage Actor-Critic (A3C) algorithm: (1) applying a ReLU function to advantage estimates, (2) spectral normalization of actor-critic weights, and (3) incorporating dropout as a Bayesian approximation. We prove under standard assumptions that restricting policy updates to positive advantages optimizes for value by maximizing a lower bound on the value function plus an additive term. We show that the additive term is bounded proportional to the Lipschitz constant of the value function, which offers theoretical grounding for spectral normalization of critic weights. Finally, our application of dropout corresponds to approximate Bayesian inference over both the actor and critic parameters, which enables prudent state-aware exploration around the modes of the actor via Thompson sampling. Extensive empirical evaluations on diverse benchmarks reveal the superior performance of our approach compared to existing on- and off-policy algorithms. We demonstrate significant improvements for median and interquartile mean metrics over PPO, SAC, and TD3 on the MuJoCo continuous control benchmark. Moreover, we see improvement over PPO in the challenging ProcGen generalization benchmark.


VISIT: Visualizing and Interpreting the Semantic Information Flow of Transformers

arXiv.org Artificial Intelligence

Recent advances in interpretability suggest we can project weights and hidden states of transformer-based language models (LMs) to their vocabulary, a transformation that makes them more human interpretable. In this paper, we investigate LM attention heads and memory values, the vectors the models dynamically create and recall while processing a given input. By analyzing the tokens they represent through this projection, we identify patterns in the information flow inside the attention mechanism. Based on our discoveries, we create a tool to visualize a forward pass of Generative Pre-trained Transformers (GPTs) as an interactive flow graph, with nodes representing neurons or hidden states and edges representing the interactions between them. Our visualization simplifies huge amounts of data into easy-to-read plots that can reflect the models' internal processing, uncovering the contribution of each component to the models' final prediction. Our visualization also unveils new insights about the role of layer norms as semantic filters that influence the models' output, and about neurons that are always activated during forward passes and act as regularization vectors.


A Survey of Large Language Models

arXiv.org Artificial Intelligence

Language is essentially a complex, intricate system of human expressions governed by grammatical rules. It poses a significant challenge to develop capable AI algorithms for comprehending and grasping a language. As a major approach, language modeling has been widely studied for language understanding and generation in the past two decades, evolving from statistical language models to neural language models. Recently, pre-trained language models (PLMs) have been proposed by pre-training Transformer models over large-scale corpora, showing strong capabilities in solving various NLP tasks. Since researchers have found that model scaling can lead to performance improvement, they further study the scaling effect by increasing the model size to an even larger size. Interestingly, when the parameter scale exceeds a certain level, these enlarged language models not only achieve a significant performance improvement but also show some special abilities that are not present in small-scale language models. To discriminate the difference in parameter scale, the research community has coined the term large language models (LLM) for the PLMs of significant size. Recently, the research on LLMs has been largely advanced by both academia and industry, and a remarkable progress is the launch of ChatGPT, which has attracted widespread attention from society. The technical evolution of LLMs has been making an important impact on the entire AI community, which would revolutionize the way how we develop and use AI algorithms. In this survey, we review the recent advances of LLMs by introducing the background, key findings, and mainstream techniques. In particular, we focus on four major aspects of LLMs, namely pre-training, adaptation tuning, utilization, and capacity evaluation. Besides, we also summarize the available resources for developing LLMs and discuss the remaining issues for future directions.


MAUD: An Expert-Annotated Legal NLP Dataset for Merger Agreement Understanding

arXiv.org Artificial Intelligence

Reading comprehension of legal text can be a particularly challenging task due to the length and complexity of legal clauses and a shortage of expert-annotated datasets. To address this challenge, we introduce the Merger Agreement Understanding Dataset (MAUD), an expert-annotated reading comprehension dataset based on the American Bar Association's 2021 Public Target Deal Points Study, with over 39,000 examples and over 47,000 total annotations. Our fine-tuned Transformer baselines show promising results, with models performing well above random on most questions. However, on a large subset of questions, there is still room for significant improvement. As the only expert-annotated merger agreement dataset, MAUD is valuable as a benchmark for both the legal profession and the NLP community.


One Pass Streaming Algorithm for Super Long Token Attention Approximation in Sublinear Space

arXiv.org Machine Learning

Deploying Large Language Models (LLMs) in streaming applications that involve long contexts, particularly for extended dialogues and text analysis, is of paramount importance but presents two significant challenges. Firstly, the memory consumption is substantial during the decoding phase due to the caching of Key and Value states (KV) of previous tokens. Secondly, attention computation is time-consuming with a time complexity of $O(n^2)$ for the generation of each token. In recent OpenAI DevDay (Nov 6, 2023), OpenAI released a new model that is able to support a 128K-long document, in our paper, we focus on the memory-efficient issue when context length $n$ is much greater than 128K ($n \gg 2^d$). Considering a single-layer self-attention with Query, Key, and Value matrices $Q, K, V \in \mathbb{R}^{n \times d}$, the polynomial method approximates the attention output $T \in \mathbb{R}^{n \times d}$. It accomplishes this by constructing $U_1, U_2 \in \mathbb{R}^{n \times t}$ to expedite attention ${\sf Attn}(Q, K, V)$ computation within $n^{1+o(1)}$ time executions. Despite this, storing the Key and Value matrices $K, V \in \mathbb{R}^{n \times d}$ still necessitates $O( n d)$ space, leading to significant memory usage. In response to these challenges, we introduce a new algorithm that only reads one pass of the data in streaming fashion. This method employs sublinear space $o(n)$ to store three sketch matrices, alleviating the need for exact $K, V$ storage. Notably, our algorithm exhibits exceptional memory-efficient performance with super-long tokens. As the token length $n$ increases, our error guarantee diminishes while the memory usage remains nearly constant. This unique attribute underscores the potential of our technique in efficiently handling LLMs in streaming applications.


Dialogue Quality and Emotion Annotations for Customer Support Conversations

arXiv.org Artificial Intelligence

Task-oriented conversational datasets often lack topic variability and linguistic diversity. However, with the advent of Large Language Models (LLMs) pretrained on extensive, multilingual and diverse text data, these limitations seem overcome. Nevertheless, their generalisability to different languages and domains in dialogue applications remains uncertain without benchmarking datasets. This paper presents a holistic annotation approach for emotion and conversational quality in the context of bilingual customer support conversations. By performing annotations that take into consideration the complete instances that compose a conversation, one can form a broader perspective of the dialogue as a whole. Furthermore, it provides a unique and valuable resource for the development of text classification models. To this end, we present benchmarks for Emotion Recognition and Dialogue Quality Estimation and show that further research is needed to leverage these models in a production setting.


An Extensive Study on Adversarial Attack against Pre-trained Models of Code

arXiv.org Artificial Intelligence

Transformer-based pre-trained models of code (PTMC) have been widely utilized and have achieved state-of-the-art performance in many mission-critical applications. However, they can be vulnerable to adversarial attacks through identifier substitution or coding style transformation, which can significantly degrade accuracy and may further incur security concerns. Although several approaches have been proposed to generate adversarial examples for PTMC, the effectiveness and efficiency of such approaches, especially on different code intelligence tasks, has not been well understood. To bridge this gap, this study systematically analyzes five state-of-the-art adversarial attack approaches from three perspectives: effectiveness, efficiency, and the quality of generated examples. The results show that none of the five approaches balances all these perspectives. Particularly, approaches with a high attack success rate tend to be time-consuming; the adversarial code they generate often lack naturalness, and vice versa. To address this limitation, we explore the impact of perturbing identifiers under different contexts and find that identifier substitution within for and if statements is the most effective. Based on these findings, we propose a new approach that prioritizes different types of statements for various tasks and further utilizes beam search to generate adversarial examples. Evaluation results show that it outperforms the state-of-the-art ALERT in terms of both effectiveness and efficiency while preserving the naturalness of the generated adversarial examples.


Channel and Gradient-Importance Aware Device Scheduling for Over-the-Air Federated Learning

arXiv.org Artificial Intelligence

Federated learning (FL) is a popular privacy-preserving distributed training scheme, where multiple devices collaborate to train machine learning models by uploading local model updates. To improve communication efficiency, over-the-air computation (AirComp) has been applied to FL, which leverages analog modulation to harness the superposition property of radio waves such that numerous devices can upload their model updates concurrently for aggregation. However, the uplink channel noise incurs considerable model aggregation distortion, which is critically determined by the device scheduling and compromises the learned model performance. In this paper, we propose a probabilistic device scheduling framework for over-the-air FL, named PO-FL, to mitigate the negative impact of channel noise, where each device is scheduled according to a certain probability and its model update is reweighted using this probability in aggregation. We prove the unbiasedness of this aggregation scheme and demonstrate the convergence of PO-FL on both convex and non-convex loss functions. Our convergence bounds unveil that the device scheduling affects the learning performance through the communication distortion and global update variance. Based on the convergence analysis, we further develop a channel and gradient-importance aware algorithm to optimize the device scheduling probabilities in PO-FL. Extensive simulation results show that the proposed PO-FL framework with channel and gradient-importance awareness achieves faster convergence and produces better models than baseline methods.