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UniMat: Unifying Materials Embeddings through Multi-modal Learning

Ock, Janghoon, Montoya, Joseph, Schweigert, Daniel, Hung, Linda, Suram, Santosh K., Ye, Weike

arXiv.org Artificial Intelligence

Materials science datasets are inherently heterogeneous and are available in different modalities such as characterization spectra, atomic structures, microscopic images, and text-based synthesis conditions. The advancements in multi-modal learning, particularly in vision and language models, have opened new avenues for integrating data in different forms. In this work, we evaluate common techniques in multi-modal learning (alignment and fusion) in unifying some of the most important modalities in materials science: atomic structure, X-ray diffraction patterns (XRD), and composition. We show that structure graph modality can be enhanced by aligning with XRD patterns. Additionally, we show that aligning and fusing more experimentally accessible data formats, such as XRD patterns and compositions, can create more robust joint embeddings than individual modalities across various tasks. This lays the groundwork for future studies aiming to exploit the full potential of multi-modal data in materials science, facilitating more informed decision-making in materials design and discovery.


Real-time experiment-theory closed-loop interaction for autonomous materials science

Liang, Haotong, Wang, Chuangye, Yu, Heshan, Kirsch, Dylan, Pant, Rohit, McDannald, Austin, Kusne, A. Gilad, Zhao, Ji-Cheng, Takeuchi, Ichiro

arXiv.org Artificial Intelligence

Iterative cycles of theoretical prediction and experimental validation are the cornerstone of the modern scientific method. However, the proverbial "closing of the loop" in experiment-theory cycles in practice are usually ad hoc, often inherently difficult, or impractical to repeat on a systematic basis, beset by the scale or the time constraint of computation or the phenomena under study. Here, we demonstrate Autonomous MAterials Search Engine (AMASE), where we enlist robot science to perform self-driving continuous cyclical interaction of experiments and computational predictions for materials exploration. In particular, we have applied the AMASE formalism to the rapid mapping of a temperature-composition phase diagram, a fundamental task for the search and discovery of new materials. Thermal processing and experimental determination of compositional phase boundaries in thin films are autonomously interspersed with real-time updating of the phase diagram prediction through the minimization of Gibbs free energies. AMASE was able to accurately determine the eutectic phase diagram of the Sn-Bi binary thin-film system on the fly from a self-guided campaign covering just a small fraction of the entire composition - temperature phase space, translating to a 6-fold reduction in the number of necessary experiments. This study demonstrates for the first time the possibility of real-time, autonomous, and iterative interactions of experiments and theory carried out without any human intervention.


Probabilistic Phase Labeling and Lattice Refinement for Autonomous Material Research

Chang, Ming-Chiang, Ament, Sebastian, Amsler, Maximilian, Sutherland, Duncan R., Zhou, Lan, Gregoire, John M., Gomes, Carla P., van Dover, R. Bruce, Thompson, Michael O.

arXiv.org Artificial Intelligence

X-ray diffraction (XRD) is an essential technique to determine a material's crystal structure in high-throughput experimentation, and has recently been incorporated in artificially intelligent agents in autonomous scientific discovery processes. However, rapid, automated and reliable analysis method of XRD data matching the incoming data rate remains a major challenge. To address these issues, we present CrystalShift, an efficient algorithm for probabilistic XRD phase labeling that employs symmetry-constrained pseudo-refinement optimization, best-first tree search, and Bayesian model comparison to estimate probabilities for phase combinations without requiring phase space information or training. We demonstrate that CrystalShift provides robust probability estimates, outperforming existing methods on synthetic and experimental datasets, and can be readily integrated into high-throughput experimental workflows. In addition to efficient phase-mapping, CrystalShift offers quantitative insights into materials' structural parameters, which facilitate both expert evaluation and AI-based modeling of the phase space, ultimately accelerating materials identification and discovery.


Machine learning-assisted close-set X-ray diffraction phase identification of transition metals

Zhdanov, Maksim, Zhdanov, Andrey

arXiv.org Artificial Intelligence

Machine learning has been applied to the problem of X-ray diffraction phase prediction with promising results. In this paper, we describe a method for using machine learning to predict crystal structure phases from X-ray diffraction data of transition metals and their oxides. We evaluate the performance of our method and compare the variety of its settings. Our results demonstrate that the proposed machine learning framework achieves competitive performance. This demonstrates the potential for machine learning to significantly impact the field of X-ray diffraction and crystal structure determination.


Machine Learning Automated Approach for Enormous Synchrotron X-Ray Diffraction Data Interpretation

Zhao, Xiaodong, Luo, YiXuan, Liu, Juejing, Liu, Wenjun, Rosso, Kevin M., Guo, Xiaofeng, Geng, Tong, Li, Ang, Zhang, Xin

arXiv.org Artificial Intelligence

Manual analysis of XRD data is usually laborious and time consuming. The deep neural network (DNN) based models trained by synthetic XRD patterns are proved to be an automatic, accurate, and high throughput method to analysis common XRD data collected from solid sample in ambient environment. However, it remains unknown that whether synthetic XRD based models are capable to solve u-XRD mapping data for in-situ experiments involving liquid phase exhibiting lower quality with significant artifacts. In this study, we collected u-XRD mapping data from an LaCl3-calcite hydrothermal fluid system and trained two categories of models to solve the experimental XRD patterns. The models trained by synthetic XRD patterns show low accuracy (as low as 64%) when solving experimental u-XRD mapping data. The accuracy of the DNN models was significantly improved (90% or above) when training them with the dataset containing both synthetic and small number of labeled experimental u-XRD patterns. This study highlighted the importance of labeled experimental patterns on the training of DNN models to solve u-XRD mapping data from in-situ experiments involving liquid phase.


Finding hidden regularities in nature: Researchers apply deep learning to X-ray diffraction

#artificialintelligence

X-ray diffraction (XRD) is an experimental technique to discern the atomic structure of a material by irradiating it with X-rays at different angles. Essentially, the intensity of the reflected X-rays becomes high at specific irradiation angles, producing a pattern of diffraction peaks. An XRD serves as a fingerprint for a material since each substance produces a unique pattern. In research and development, changes in XRDs are used to identify the positions and amounts of additional elements that need to be added to fine-tune a material to help enhance a desired functional property, say, energy storage efficiency in batteries. However, the peak changes in XRDs are barely discernible to humans.


An Incremental Phase Mapping Approach for X-ray Diffraction Patterns using Binary Peak Representations

Jha, Dipendra, Narayanachari, K. V. L. V., Zhang, Ruifeng, Liao, Justin, Keane, Denis T., Liao, Wei-keng, Choudhary, Alok, Chung, Yip-Wah, Bedzyk, Michael, Agrawal, Ankit

arXiv.org Artificial Intelligence

Despite the huge advancement in knowledge discovery and data mining techniques, the X-ray diffraction (XRD) analysis process has mostly remained untouched and still involves manual investigation, comparison, and verification. Due to the large volume of XRD samples from high-throughput XRD experiments, it has become impossible for domain scientists to process them manually. Recently, they have started leveraging standard clustering techniques, to reduce the XRD pattern representations requiring manual efforts for labeling and verification. Nevertheless, these standard clustering techniques do not handle problem-specific aspects such as peak shifting, adjacent peaks, background noise, and mixed phases; hence, resulting in incorrect composition-phase diagrams that complicate further steps. Here, we leverage data mining techniques along with domain expertise to handle these issues. In this paper, we introduce an incremental phase mapping approach based on binary peak representations using a new threshold based fuzzy dissimilarity measure. The proposed approach first applies an incremental phase computation algorithm on discrete binary peak representation of XRD samples, followed by hierarchical clustering or manual merging of similar pure phases to obtain the final composition-phase diagram. We evaluate our method on the composition space of two ternary alloy systems- Co-Ni-Ta and Co-Ti-Ta. Our results are verified by domain scientists and closely resembles the manually computed ground-truth composition-phase diagrams. The proposed approach takes us closer towards achieving the goal of complete end-to-end automated XRD analysis.


Artifact Identification in X-ray Diffraction Data using Machine Learning Methods

Yanxon, Howard, Weng, James, Parraga, Hannah, Xu, Wenqian, Ruett, Uta, Schwarz, Nicholas

arXiv.org Artificial Intelligence

The in situ synchrotron high-energy X-ray powder diffraction (XRD) technique is highly utilized by researchers to analyze the crystallographic structures of materials in functional devices (e.g., battery materials) or in complex sample environments (e.g., diamond anvil cells or syntheses reactors). An atomic structure of a material can be identified by its diffraction pattern, along with detailed analysis such as Rietveld refinement which indicates how the measured structure deviates from the ideal structure (e.g., internal stresses or defects). For in situ experiments, a series of XRD images is usually collected on the same sample at different conditions (e.g., adiabatic conditions), yielding different states of matter, or simply collected continuously as a function of time to track the change of a sample over a chemical or physical process. In situ experiments are usually performed with area detectors, collecting 2D images composed of diffraction rings for ideal powders. Depending on the material's form, one may observe different characteristics other than the typical Debye Scherrer rings for a realistic sample and its environments, such as textures or preferred orientations and single crystal diffraction spots in the 2D XRD image. In this work, we present an investigation of machine learning methods for fast and reliable identification and separation of the single crystal diffraction spots in XRD images. The exclusion of artifacts during an XRD image integration process allows a precise analysis of the powder diffraction rings of interest. We observe that the gradient boosting method can consistently produce high accuracy results when it is trained with small subsets of highly diverse datasets. The method dramatically decreases the amount of time spent on identifying and separating single crystal spots in comparison to the conventional method.


DRNets can solve Sudoku, speed scientific discovery

#artificialintelligence

Say you're driving with a friend in a familiar neighborhood, and the friend asks you to turn at the next intersection. The friend doesn't say which way to turn, but since you both know it's a one-way street, it's understood. That type of reasoning is at the heart of a new artificial-intelligence framework – tested successfully on overlapping Sudoku puzzles – that could speed discovery in materials science, renewable energy technology and other areas. An interdisciplinary research team led by Carla Gomes, the Ronald C. and Antonia V. Nielsen Professor of Computing and Information Science in the Cornell Ann S. Bowers College of Computing and Information Science, has developed Deep Reasoning Networks (DRNets), which combine deep learning – even with a relatively small amount of data – with an understanding of the subject's boundaries and rules, known as "constraint reasoning." Di Chen, a computer science doctoral student in Gomes' group, is first author of "Automating Crystal-Structure Phase Mapping by Combining Deep Learning with Constraint Reasoning," published Sept. 16 in Nature Machine Intelligence.


Automating Crystal-Structure Phase Mapping: Combining Deep Learning with Constraint Reasoning

Chen, Di, Bai, Yiwei, Ament, Sebastian, Zhao, Wenting, Guevarra, Dan, Zhou, Lan, Selman, Bart, van Dover, R. Bruce, Gregoire, John M., Gomes, Carla P.

arXiv.org Artificial Intelligence

Crystal-structure phase mapping is a core, long-standing challenge in materials science that requires identifying crystal structures, or mixtures thereof, in synthesized materials. Materials science experts excel at solving simple systems but cannot solve complex systems, creating a major bottleneck in high-throughput materials discovery. Herein we show how to automate crystal-structure phase mapping. We formulate phase mapping as an unsupervised pattern demixing problem and describe how to solve it using Deep Reasoning Networks (DRNets). DRNets combine deep learning with constraint reasoning for incorporating scientific prior knowledge and consequently require only a modest amount of (unlabeled) data. DRNets compensate for the limited data by exploiting and magnifying the rich prior knowledge about the thermodynamic rules governing the mixtures of crystals with constraint reasoning seamlessly integrated into neural network optimization. DRNets are designed with an interpretable latent space for encoding prior-knowledge domain constraints and seamlessly integrate constraint reasoning into neural network optimization. DRNets surpass previous approaches on crystal-structure phase mapping, unraveling the Bi-Cu-V oxide phase diagram, and aiding the discovery of solar-fuels materials.