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Semi-Implicit Graph Variational Auto-Encoders

Neural Information Processing Systems

Semi-implicit graph variational auto-encoder (SIG-VAE) is proposed to expand the flexibility of variational graph auto-encoders (VGAE) to model graph data. SIG-VAE employs a hierarchical variational framework to enable neighboring node sharing for better generative modeling of graph dependency structure, together with a Bernoulli-Poisson link decoder. Not only does this hierarchical construction provide a more flexible generative graph model to better capture real-world graph properties, but also does SIG-VAE naturally lead to semi-implicit hierarchical variational inference that allows faithful modeling of implicit posteriors of given graph data, which may exhibit heavy tails, multiple modes, skewness, and rich dependency structures. SIG-VAE integrates a carefully designed generative model, well suited to model real-world sparse graphs, and a sophisticated variational inference network, which propagates the graph structural information and distribution uncertainty to capture complex posteriors. SIG-VAE clearly outperforms a simple combination of VGAE with variational inference, including semi-implicit variational inference~(SIVI) or normalizing flow (NF), which does not propagate uncertainty in its inference network, and provides more interpretable latent representations than VGAE does. Extensive experiments with a variety of graph data show that SIG-VAE significantly outperforms state-of-the-art methods on several different graph analytic tasks.


GFlowNets for Learning Better Drug-Drug Interaction Representations

Wasi, Azmine Toushik

arXiv.org Artificial Intelligence

Drug-drug interactions pose a significant challenge in clinical pharmacology, with severe class imbalance among interaction types limiting the effectiveness of predictive models. Common interactions dominate datasets, while rare but critical interactions remain underrepre-sented, leading to poor model performance on infrequent cases. Existing methods often treat DDI prediction as a binary problem, ignoring class-specific nuances and exacerbating bias toward frequent interactions. To address this, we propose a framework combining Generative Flow Networks (GFlowNet) with Variational Graph Autoencoders (VGAE) to generate synthetic samples for rare classes, improving model balance and generate effective and novel DDI pairs. Our approach enhances predictive performance across interaction types, ensuring better clinical reliability.






To Share or Not to Share: Investigating Weight Sharing in Variational Graph Autoencoders

Salha-Galvan, Guillaume, Xu, Jiaying

arXiv.org Artificial Intelligence

This paper investigates the understudied practice of weight sharing (WS) in variational graph autoencoders (VGAE). WS presents both benefits and drawbacks for VGAE model design and node embedding learning, leaving its overall relevance unclear and the question of whether it should be adopted unresolved. We rigorously analyze its implications and, through extensive experiments on a wide range of graphs and VGAE variants, demonstrate that the benefits of WS consistently outweigh its drawbacks. Based on our findings, we recommend WS as an effective approach to optimize, regularize, and simplify VGAE models without significant performance loss.


Graph Neural Networks for O-RAN Mobility Management: A Link Prediction Approach

Bermudez, Ana Gonzalez, Farreras, Miquel, Groshev, Milan, Trujillo, José Antonio, de la Bandera, Isabel, Barco, Raquel

arXiv.org Artificial Intelligence

Mobility performance has been a key focus in cellular networks up to 5G. To enhance handover (HO) performance, 3GPP introduced Conditional Handover (CHO) and Layer 1/Layer 2 Triggered Mobility (LTM) mechanisms in 5G. While these reactive HO strategies address the trade-off between HO failures (HOF) and ping-pong effects, they often result in inefficient radio resource utilization due to additional HO preparations. To overcome these challenges, this article proposes a proactive HO framework for mobility management in O-RAN, leveraging user-cell link predictions to identify the optimal target cell for HO. We explore various categories of Graph Neural Networks (GNNs) for link prediction and analyze the complexity of applying them to the mobility management domain. Two GNN models are compared using a real-world dataset, with experimental results demonstrating their ability to capture the dynamic and graph-structured nature of cellular networks. Finally, we present key insights from our study and outline future steps to enable the integration of GNN-based link prediction for mobility management in 6G networks.