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 treescope


Penzai + Treescope: A Toolkit for Interpreting, Visualizing, and Editing Models As Data

Johnson, Daniel D.

arXiv.org Artificial Intelligence

Much of today's machine learning research involves interpreting, modifying or visualizing models after they are trained. I present Penzai, a neural network library designed to simplify model manipulation by representing models as simple data structures, and Treescope, an interactive pretty-printer and array visualizer that can visualize both model inputs/outputs and the models themselves. Penzai models are built using declarative combinators that expose the model forward pass in the structure of the model object itself, and use named axes to ensure each operation is semantically meaningful. With Penzai's tree-editing selector system, users can both insert and replace model components, allowing them to intervene on intermediate values or make other edits to the model structure. Users can then get immediate feedback by visualizing the modified model with Treescope. I describe the motivation and main features of Penzai and Treescope, and discuss how treating the model as data enables a variety of analyses and interventions to be implemented as data-structure transformations, without requiring model designers to add explicit hooks.


TreeScope: An Agricultural Robotics Dataset for LiDAR-Based Mapping of Trees in Forests and Orchards

Cheng, Derek, Ojeda, Fernando Cladera, Prabhu, Ankit, Liu, Xu, Zhu, Alan, Green, Patrick Corey, Ehsani, Reza, Chaudhari, Pratik, Kumar, Vijay

arXiv.org Artificial Intelligence

Data collection for forestry, timber, and agriculture currently relies on manual techniques which are labor-intensive and time-consuming. We seek to demonstrate that robotics offers improvements over these techniques and accelerate agricultural research, beginning with semantic segmentation and diameter estimation of trees in forests and orchards. We present TreeScope v1.0, the first robotics dataset for precision agriculture and forestry addressing the counting and mapping of trees in forestry and orchards. TreeScope provides LiDAR data from agricultural environments collected with robotics platforms, such as UAV and mobile robot platforms carried by vehicles and human operators. In the first release of this dataset, we provide ground-truth data with over 1,800 manually annotated semantic labels for tree stems and field-measured tree diameters. We share benchmark scripts for these tasks that researchers may use to evaluate the accuracy of their algorithms. Finally, we run our open-source diameter estimation and off-the-shelf semantic segmentation algorithms and share our baseline results.