Synthesizing new materials efficiently is highly demanded in various research fields. However, this process is usually slow and expensive, especially for metallic glasses, whose formation strongly depends on the optimal combinations of multiple elements to resist crystallization. This constraint renders only several thousands of candidates explored in the vast material space since 1960. Recently, data-driven approaches armed by advanced machine learning techniques provided alternative routes for intelligent materials design. Due to data scarcity and immature material encoding, the conventional tabular data is usually mined by statistical learning algorithms, giving limited model predictability and generalizability. Here, we propose sophisticated data learning from material network representations. The node elements are encoded from the Wikipedia by a language model. Graph neural networks with versatile architectures are designed to serve as recommendation systems to explore hidden relationships among materials. By employing Wikipedia embeddings from different languages, we assess the capability of natural languages in materials design. Our study proposes a new paradigm to harvesting new amorphous materials and beyond with artificial intelligence.

Graph Neural Networks (GNNs) have emerged as promising solutions for collaborative filtering (CF) through the modeling of user-item interaction graphs. The nucleus of existing GNN-based recommender systems involves recursive message passing along user-item interaction edges to refine encoded embeddings. Despite their demonstrated effectiveness, current GNN-based methods encounter challenges of limited receptive fields and the presence of noisy ``interest-irrelevant'' connections. In contrast, Transformer-based methods excel in aggregating information adaptively and globally. Nevertheless, their application to large-scale interaction graphs is hindered by inherent complexities and challenges in capturing intricate, entangled structural information. In this paper, we propose TransGNN, a novel model that integrates Transformer and GNN layers in an alternating fashion to mutually enhance their capabilities. Specifically, TransGNN leverages Transformer layers to broaden the receptive field and disentangle information aggregation from edges, which aggregates information from more relevant nodes, thereby enhancing the message passing of GNNs. Additionally, to capture graph structure information effectively, positional encoding is meticulously designed and integrated into GNN layers to encode such structural knowledge into node attributes, thus enhancing the Transformer's performance on graphs. Efficiency considerations are also alleviated by proposing the sampling of the most relevant nodes for the Transformer, along with two efficient sample update strategies to reduce complexity. Furthermore, theoretical analysis demonstrates that TransGNN offers increased expressiveness compared to GNNs, with only a marginal increase in linear complexity. Extensive experiments on five public datasets validate the effectiveness and efficiency of TransGNN.