synaptic connection
Objective and efficient inference for couplings in neuronal networks
Yu Terada, Tomoyuki Obuchi, Takuya Isomura, Yoshiyuki Kabashima
Inferring directional couplings from the spike data of networks is desired in various scientific fields such as neuroscience. Here, we apply a recently proposed objective procedure to the spike data obtained from the Hodgkin-Huxley type models and in vitro neuronal networks cultured in a circular structure. As a result, we succeed in reconstructing synaptic connections accurately from the evoked activity as well as the spontaneous one. To obtain the results, we invent an analytic formula approximately implementing a method of screening relevant couplings. This significantly reduces the computational cost of the screening method employed in the proposed objective procedure, making it possible to treat large-size systems as in this study.
The Impact of Structural Changes on Learning Capacity in the Fly Olfactory Neural Circuit
Xie, Katherine, Ocker, Gabriel Koch
The Drosophila mushroom body (MB) is known to be involved in olfactory learning and memory; the synaptic plasticity of the Kenyon cell (KC) to mushroom body output neuron (MBON) synapses plays a key role in the learning process. Previous research has focused on projection neuron (PN) to Kenyon cell (KC) connectivity within the MB; we examine how perturbations to the mushroom body circuit structure and changes in connectivity, specifically within the KC to mushroom body output neuron (MBON) neural circuit, affect the MBONs' ability to distinguish between odor classes. We constructed a neural network that incorporates the connectivity between PNs, KCs, and MBONs. To train our model, we generated ten artificial input classes, which represent the projection neuron activity in response to different odors. We collected data on the number of KC-to-MBON connections, MBON error rates, and KC-to-MBON synaptic weights, among other metrics. We observed that MBONs with very few presynaptic KCs consistently performed worse than others in the odor classification task. The developmental types of KCs also played a significant role in each MBON's output. We performed random and targeted KC ablation and observed that ablating developmentally mature KCs had a greater negative impact on MBONs' learning capacity than ablating immature KCs. Random and targeted pruning of KC-MBON synaptic connections yielded results largely consistent with the ablation experiments. To further explore the various types of KCs, we also performed rewiring experiments in the PN to KC circuit. Our study furthers our understanding of olfactory neuroplasticity and provides important clues to understanding learning and memory in general. Understanding how the olfactory circuits process and learn can also have potential applications in artificial intelligence and treatments for neurodegenerative diseases.
SPICED: A Synaptic Homeostasis-Inspired Framework for Unsupervised Continual EEG Decoding
Zhou, Yangxuan, Zhao, Sha, Wang, Jiquan, Jiang, Haiteng, Li, Shijian, Li, Tao, Pan, Gang
Human brain achieves dynamic stability-plasticity balance through synaptic homeostasis. Inspired by this biological principle, we propose SPICED: a neuromorphic framework that integrates the synaptic homeostasis mechanism for unsupervised continual EEG decoding, particularly addressing practical scenarios where new individuals with inter-individual variability emerge continually. SPICED comprises a novel synaptic network that enables dynamic expansion during continual adaptation through three bio-inspired neural mechanisms: (1) critical memory reactivation; (2) synaptic consolidation and (3) synaptic renormalization. The interplay within synaptic homeostasis dynamically strengthens task-discriminative memory traces and weakens detrimental memories. By integrating these mechanisms with continual learning system, SPICED preferentially replays task-discriminative memory traces that exhibit strong associations with newly emerging individuals, thereby achieving robust adaptations. Meanwhile, SPICED effectively mitigates catastrophic forgetting by suppressing the replay prioritization of detrimental memories during long-term continual learning. Validated on three EEG datasets, SPICED show its effectiveness.
Implementing engrams from a machine learning perspective: XOR as a basic motif
de Lucas, Jesus Marco, Fernandez, Maria Peña, Iglesias, Lara Lloret
We have previously presented the idea of how complex multimodal information could be represented in our brains in a compressed form, following mechanisms similar to those employed in machine learning tools, like autoencoders. In this short comment note we reflect, mainly with a didactical purpose, upon the basic question for a biological implementation: what could be the mechanism working as a loss function, and how it could be connected to a neuronal network providing the required feedback to build a simple training configuration. We present our initial ideas based on a basic motif that implements an XOR switch, using few excitatory and inhibitory neurons. Such motif is guided by a principle of homeostasis, and it implements a loss function that could provide feedback to other neuronal structures, establishing a control system. We analyse the presence of this XOR motif in the connectome of C.Elegans, and indicate the relationship with the well-known lateral inhibition motif. We then explore how to build a basic biological neuronal structure with learning capacity integrating this XOR motif. Guided by the computational analogy, we show an initial example that indicates the feasibility of this approach, applied to learning binary sequences, like it is the case for simple melodies. In summary, we provide didactical examples exploring the parallelism between biological and computational learning mechanisms, identifying basic motifs and training procedures, and how an engram encoding a melody could be built using a simple recurrent network involving both excitatory and inhibitory neurons.
Synaptic Sampling: A Bayesian Approach to Neural Network Plasticity and Rewiring David Kappel
We propose that inherent stochasticity enables synaptic plasticity to carry out probabilistic inference by sampling from a posterior distribution of synaptic parameters. This view provides a viable alternative to existing models that propose convergence of synaptic weights to maximum likelihood parameters. It explains how priors on weight distributions and connection probabilities can be merged optimally with learned experience. In simulations we show that our model for synaptic plasticity allows spiking neural networks to compensate continuously for unforeseen disturbances. Furthermore it provides a normative mathematical framework to better understand the permanent variability and rewiring observed in brain networks.
Learning Delays in Spiking Neural Networks using Dilated Convolutions with Learnable Spacings
Hammouamri, Ilyass, Khalfaoui-Hassani, Ismail, Masquelier, Timothée
Spiking Neural Networks (SNNs) are a promising research direction for building power-efficient information processing systems, especially for temporal tasks such as speech recognition. In SNNs, delays refer to the time needed for one spike to travel from one neuron to another. These delays matter because they influence the spike arrival times, and it is well-known that spiking neurons respond more strongly to coincident input spikes. More formally, it has been shown theoretically that plastic delays greatly increase the expressivity in SNNs. Yet, efficient algorithms to learn these delays have been lacking. Here, we propose a new discrete-time algorithm that addresses this issue in deep feedforward SNNs using backpropagation, in an offline manner. To simulate delays between consecutive layers, we use 1D convolutions across time. The kernels contain only a few non-zero weights - one per synapse - whose positions correspond to the delays. These positions are learned together with the weights using the recently proposed Dilated Convolution with Learnable Spacings (DCLS). We evaluated our method on three datasets: the Spiking Heidelberg Dataset (SHD), the Spiking Speech Commands (SSC) and its non-spiking version Google Speech Commands v0.02 (GSC) benchmarks, which require detecting temporal patterns. We used feedforward SNNs with two or three hidden fully connected layers, and vanilla leaky integrate-and-fire neurons. We showed that fixed random delays help and that learning them helps even more. Furthermore, our method outperformed the state-of-the-art in the three datasets without using recurrent connections and with substantially fewer parameters. Our work demonstrates the potential of delay learning in developing accurate and precise models for temporal data processing. Our code is based on PyTorch / SpikingJelly and available at: https://github.com/Thvnvtos/SNN-delays