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Mummified cheetahs could help save the critically endangered big cats

Popular Science

Cheetahs were spotted on the Arabian Peninsula as recently as 1977. Breakthroughs, discoveries, and DIY tips sent six days a week. Seven naturally-mummified cheetahs are more than just an exciting paleontological find. The specimens discovered in five caves near the city of Arar in northern Saudi Arabia offer a glimpse of hope for reintroducing the species to the Arabian Peninsula. The findings are described in a study published today in the journal .


ECOSoundSet: a finely annotated dataset for the automated acoustic identification of Orthoptera and Cicadidae in North, Central and temperate Western Europe

Funosas, David, Massol, Elodie, Bas, Yves, Schmidt, Svenja, Arend, Dominik, Gebhard, Alexander, Barbaro, Luc, König, Sebastian, Font, Rafael Carbonell, Sannier, David, Deroussen, Fernand, Sueur, Jérôme, Roesti, Christian, Trilar, Tomi, Forstmeier, Wolfgang, Roger, Lucas, Matheu, Eloïsa, Guzik, Piotr, Barataud, Julien, Pelozuelo, Laurent, Puissant, Stéphane, Mueller, Sandra, Schuller, Björn, Montoya, Jose M., Triantafyllopoulos, Andreas, Cauchoix, Maxime

arXiv.org Artificial Intelligence

Currently available tools for the automated acoustic recognition of European insects in natural soundscapes are limited in scope. Large and ecologically heterogeneous acoustic datasets are currently needed for these algorithms to cross-contextually recognize the subtle and complex acoustic signatures produced by each species, thus making the availability of such datasets a key requisite for their development. Here we present ECOSoundSet (European Cicadidae and Orthoptera Sound dataSet), a dataset containing 10,653 recordings of 200 orthopteran and 24 cicada species (217 and 26 respective taxa when including subspecies) present in North, Central, and temperate Western Europe (Andorra, Belgium, Denmark, mainland France and Corsica, Germany, Ireland, Luxembourg, Monaco, Netherlands, United Kingdom, Switzerland), collected partly through targeted fieldwork in South France and Catalonia and partly through contributions from various European entomologists. The dataset is composed of a combination of coarsely labeled recordings, for which we can only infer the presence, at some point, of their target species (weak labeling), and finely annotated recordings, for which we know the specific time and frequency range of each insect sound present in the recording (strong labeling). We also provide a train/validation/test split of the strongly labeled recordings, with respective approximate proportions of 0.8, 0.1 and 0.1, in order to facilitate their incorporation in the training and evaluation of deep learning algorithms. This dataset could serve as a meaningful complement to recordings already available online for the training of deep learning algorithms for the acoustic classification of orthopterans and cicadas in North, Central, and temperate Western Europe.


Building Machine Learning Challenges for Anomaly Detection in Science

Campolongo, Elizabeth G., Chou, Yuan-Tang, Govorkova, Ekaterina, Bhimji, Wahid, Chao, Wei-Lun, Harris, Chris, Hsu, Shih-Chieh, Lapp, Hilmar, Neubauer, Mark S., Namayanja, Josephine, Subramanian, Aneesh, Harris, Philip, Anand, Advaith, Carlyn, David E., Ghosh, Subhankar, Lawrence, Christopher, Moreno, Eric, Raikman, Ryan, Wu, Jiaman, Zhang, Ziheng, Adhi, Bayu, Gharehtoragh, Mohammad Ahmadi, Monsalve, Saúl Alonso, Babicz, Marta, Baig, Furqan, Banerji, Namrata, Bardon, William, Barna, Tyler, Berger-Wolf, Tanya, Dieng, Adji Bousso, Brachman, Micah, Buat, Quentin, Hui, David C. Y., Cao, Phuong, Cerino, Franco, Chang, Yi-Chun, Chaulagain, Shivaji, Chen, An-Kai, Chen, Deming, Chen, Eric, Chou, Chia-Jui, Ciou, Zih-Chen, Cochran-Branson, Miles, Choi, Artur Cordeiro Oudot, Coughlin, Michael, Cremonesi, Matteo, Dadarlat, Maria, Darch, Peter, Desai, Malina, Diaz, Daniel, Dillmann, Steven, Duarte, Javier, Duporge, Isla, Ekka, Urbas, Heravi, Saba Entezari, Fang, Hao, Flynn, Rian, Fox, Geoffrey, Freed, Emily, Gao, Hang, Gao, Jing, Gonski, Julia, Graham, Matthew, Hashemi, Abolfazl, Hauck, Scott, Hazelden, James, Peterson, Joshua Henry, Hoang, Duc, Hu, Wei, Huennefeld, Mirco, Hyde, David, Janeja, Vandana, Jaroenchai, Nattapon, Jia, Haoyi, Kang, Yunfan, Kholiavchenko, Maksim, Khoda, Elham E., Kim, Sangin, Kumar, Aditya, Lai, Bo-Cheng, Le, Trung, Lee, Chi-Wei, Lee, JangHyeon, Lee, Shaocheng, van der Lee, Suzan, Lewis, Charles, Li, Haitong, Li, Haoyang, Liao, Henry, Liu, Mia, Liu, Xiaolin, Liu, Xiulong, Loncar, Vladimir, Lyu, Fangzheng, Makarov, Ilya, Mao, Abhishikth Mallampalli Chen-Yu, Michels, Alexander, Migala, Alexander, Mokhtar, Farouk, Morlighem, Mathieu, Namgung, Min, Novak, Andrzej, Novick, Andrew, Orsborn, Amy, Padmanabhan, Anand, Pan, Jia-Cheng, Pandya, Sneh, Pei, Zhiyuan, Peixoto, Ana, Percivall, George, Leung, Alex Po, Purushotham, Sanjay, Que, Zhiqiang, Quinnan, Melissa, Ranjan, Arghya, Rankin, Dylan, Reissel, Christina, Riedel, Benedikt, Rubenstein, Dan, Sasli, Argyro, Shlizerman, Eli, Singh, Arushi, Singh, Kim, Sokol, Eric R., Sorensen, Arturo, Su, Yu, Taheri, Mitra, Thakkar, Vaibhav, Thomas, Ann Mariam, Toberer, Eric, Tsai, Chenghan, Vandewalle, Rebecca, Verma, Arjun, Venterea, Ricco C., Wang, He, Wang, Jianwu, Wang, Sam, Wang, Shaowen, Watts, Gordon, Weitz, Jason, Wildridge, Andrew, Williams, Rebecca, Wolf, Scott, Xu, Yue, Yan, Jianqi, Yu, Jai, Zhang, Yulei, Zhao, Haoran, Zhao, Ying, Zhong, Yibo

arXiv.org Artificial Intelligence

Scientific discoveries are often made by finding a pattern or object that was not predicted by the known rules of science. Oftentimes, these anomalous events or objects that do not conform to the norms are an indication that the rules of science governing the data are incomplete, and something new needs to be present to explain these unexpected outliers. The challenge of finding anomalies can be confounding since it requires codifying a complete knowledge of the known scientific behaviors and then projecting these known behaviors on the data to look for deviations. When utilizing machine learning, this presents a particular challenge since we require that the model not only understands scientific data perfectly but also recognizes when the data is inconsistent and out of the scope of its trained behavior. In this paper, we present three datasets aimed at developing machine learning-based anomaly detection for disparate scientific domains covering astrophysics, genomics, and polar science. We present the different datasets along with a scheme to make machine learning challenges around the three datasets findable, accessible, interoperable, and reusable (FAIR). Furthermore, we present an approach that generalizes to future machine learning challenges, enabling the possibility of large, more compute-intensive challenges that can ultimately lead to scientific discovery.


A Genetic Fuzzy System for Interpretable and Parsimonious Reinforcement Learning Policies

Bishop, Jordan T., Gallagher, Marcus, Browne, Will N.

arXiv.org Artificial Intelligence

Reinforcement learning (RL) is experiencing a resurgence in research interest, where Learning Classifier Systems (LCSs) have been applied for many years. However, traditional Michigan approaches tend to evolve large rule bases that are difficult to interpret or scale to domains beyond standard mazes. A Pittsburgh Genetic Fuzzy System (dubbed Fuzzy MoCoCo) is proposed that utilises both multiobjective and cooperative coevolutionary mechanisms to evolve fuzzy rule-based policies for RL environments. Multiobjectivity in the system is concerned with policy performance vs. complexity. The continuous state RL environment Mountain Car is used as a testing bed for the proposed system. Results show the system is able to effectively explore the trade-off between policy performance and complexity, and learn interpretable, high-performing policies that use as few rules as possible.


Google's new AI model 'listens' to killer whales to help protect the species

#artificialintelligence

Google's AI team has developed a new model to protect the endangered species of killer whales known as orcas in the Salish Sea. According to the Center for Whale Research, there are only 73 Southern Resident orcas -- a subspecies of the killer whale -- left in the world. So Google has teamed up with Fisheries and Oceans Canada (DFO) to monitor their condition and alert experts in the event of sickness or accidents across 12 locations. Google's team trained its AI model using 1,800 hours of underwater audio and 68,000 labels that identified the origin of the sound. When the model "hears" sound of a whale, it displays its location on Rainforest Connection, an acoustic monitoring system for animals.


AI Tests A 200-Year-Old Evolutionary Theory

#artificialintelligence

This is the tiger longwing, formally known as Heliconius hecale. Artificial intelligence helped confirm one of the oldest ideas in evolution, but it also raised some new questions. The natural world is full of copycats. Pyralid moths use the same high-pitched warning noises as tiger moths to warn away predators, and harmless king snakes and venomous coral snakes have similar coloration. King snakes and pyralid moths are using something called Batesian mimicry, when a harmless species wards off predators by passing itself off as something fiercer or more toxic. That's not a delibrate ruse, of course; it's just that over time, the king snakes that survived long enough to reproduce tended to be the ones more easily mistaken for a coral snake, so they passed on that resemblance to their offspring.


Deep learning on butterfly phenotypes tests evolution's oldest mathematical model

Cuthill, Jennifer F. Hoyal, Guttenberg, Nicholas, Ledger, Sophie, Crowther, Robyn, Huertas, Blanca

arXiv.org Machine Learning

Traditional anatomical analyses captured only a fraction of real phenomic information. Here, we apply deep learning to quantify total phenotypic similarity across 2468 butterfly photographs, covering 38 subspecies from the polymorphic mimicry complex of $\textit{Heliconius erato}$ and $\textit{Heliconius melpomene}$. Euclidean phenotypic distances, calculated using a deep convolutional triplet network, demonstrate significant convergence between interspecies co-mimics. This quantitatively validates a key prediction of M\"ullerian mimicry theory, evolutionary biology's oldest mathematical model. Phenotypic neighbor-joining trees are significantly correlated with wing pattern gene phylogenies, demonstrating objective, phylogenetically informative phenome capture. Comparative analyses indicate frequency-dependent, mutual convergence with coevolutionary exchange of wing pattern features. Therefore, phenotypic analysis supports reciprocal coevolution, predicted by classical mimicry theory but since disputed, and reveals mutual convergence as an intrinsic generator for the surprising diversity of M\"ullerian mimicry. This demonstrates that deep learning can generate phenomic spatial embeddings which enable quantitative tests of evolutionary hypotheses previously only testable subjectively.