Serial dependence reflects how recent sensory history shapes current perception, producing two opposing biases: repulsion, where perception is repelled from recent stimuli, and attraction, where perception is drawn toward them. Repulsion typically occurs at the sensory perception stage, while attraction arises at the post-perception stage. To uncover the neural basis of these effects, we developed a two-layer continuous attractor neural network model incorporating synaptic short-term plasticity (STP). The lower layer, dominated by synaptic depression, models sensory processing and drives repulsion due to sustained neurotransmitter depletion. The higher layer, dominated by synaptic facilitation, models post-perception processing and drives attraction by sustained high neurotransmitter release probability. Our model successfully explains the serial dependence phenomena observed in the visual orientation judgment experiments, highlighting STP as the critical mechanism, with its time constants defining the temporal windows of repulsion and attraction. Furthermore, the model provides a neural foundation for the Bayesian interpretation of serial dependence. This study advances our understanding of how the neural system leverages STP to balance sensitivity in sensory perception with stability in post-perceptual cognition.

We consider the problem of recovering a mental target (e.g., an image of a face) that a participant has in mind from paired EEG (i.e., brain responses) and image (i.e., perceived faces) data collected during interactive sessions without access to labeled information. The problem has been previously explored with labeled data but not via self-calibration, where labeled data is unavailable. Here, we present the first framework and an algorithm, CURSOR, that learns to recover unknown mental targets without access to labeled data or pre-trained decoders. Our experiments on naturalistic images of faces demonstrate that CURSOR can (1) predict image similarity scores that correlate with human perceptual judgments without any label information, (2) use these scores to rank stimuli against an unknown mental target, and (3) generate new stimuli indistinguishable from the unknown mental target (validated via a user study, N = 53). We release the brain response data set (N = 29), associated face images used as stimuli data, and a codebase to initiate further research on this novel task.

The primate visual system is typically divided into two streams -- the ventral stream, responsible for object recognition, and the dorsal stream, responsible for encoding spatial relations and motion. Recent studies have shown that convolutional neural networks (CNNs) pretrained on object recognition tasks are remarkably effective at predicting neuronal responses in the ventral stream, shedding light on the neural mechanisms underlying object recognition. However, similar models of the dorsal stream remain underdeveloped due to the lack of large scale datasets encompassing dorsal stream areas. To address this gap, we present STSBENCH, a dataset of large-scale, single neuron recordings from over 2,000 neurons in the superior temporal sulcus (STS), a nearly 50-fold increase over existing dorsal stream datasets, collected while Rhesus macaques viewed thousands of unique, natural videos. We show that our dataset can be used for benchmarking encoding models of dorsal stream neuronal responses and reconstructing visual input from neural activity.

Decoding of visual stimuli from noninvasive neuroimaging techniques such as functional magnetic resonance (fMRI) has advanced rapidly in the last years; yet, most high-performing brain decoding models rely on complicated, non-interpretable latent spaces. In this study we present an interpretable brain decoding framework that inserts a semantic bottleneck into BrainDiffuser, a well established, simple and linear decoding pipeline. We firstly produce a 214 dimensional binary interpretable space L for images, in which each dimension answers to a specific question about the image (e.g., "Is there a person?",

Invariant object recognition-the ability to identify objects despite changes in appearance-is a hallmark of visual processing in the brain, yet its understanding remains a central challenge in systems neuroscience. Artificial neural networks trained to predict neural responses to visual stimuli ("digital twins") could provide a powerful framework for studying such complex computations in silico. However, while current models accurately capture single-neuron responses within individual visual areas, their ability to reproduce how populations of neurons represent object identity, and how these representations transform across the cortical hierarchy, remains largely unexplored. Here we examine key functional signatures observed experimentally and find that current models account for hierarchical changes in basic single-neuron properties, such as receptive field size, but fail to capture more complex population-level phenomena, particularly invariant object representations. To address this gap, we introduce a biologically inspired hierarchical readout scheme that mirrors cortical anatomy, modeling each visual area as a projection from a distinct depth within a shared core network. This approach significantly improves the prediction of population-level representational transformations, outperforming standard models that use only the final layer, as well as alternatives with modified architecture, regularization, and loss function. Our results suggest that incorporating anatomical information provides a strong inductive bias in digital twin models, enabling them to better capture general principles of brain function.

Synaptic plasticity is widely considered to be crucial to the brain's ability to learn throughout life. Decades of theoretical work have therefore been invested in deriving and designing biologically plausible learning rules capable of granting various memory abilities to neural networks. Most of these theoretical approaches optimize directly for a desired memory function; but this procedure can lead to complex, finely-tuned rules, rendering them brittle to perturbations and difficult to implement in practice. Instead, we build on recent work that automatically discovers large numbers of candidate plasticity rules operating in recurrent spiking neural networks. Surprisingly, despite the fact that these rules are selected solely to achieve network stabilization, we observe across a range of network models-- feedforward, recurrent; rate and spiking--that almost all these rules endow the network with simple forms of memory such as familiarity detection - seemingly by accident.

Tactile sensing remains far less understood in neuroscience and less effective in artificial systems compared to more mature modalities such as vision and language. We bridge these gaps by introducing an Encoder-Attender-Decoder (EAD) framework to systematically explore the space of task-optimized temporal neural networks trained on realistic tactile input sequences from a customized rodent whisker-array simulator. We identify convolutional recurrent neural networks (ConvRNNs) as superior encoders to purely feedforward and state-space architectures for tactile categorization. Crucially, these ConvRNN-encoder-based EAD models achieve neural representations closely matching rodent somatosensory cortex, saturating the explainable neural variability and revealing a clear linear relationship between supervised categorization performance and neural alignment. Furthermore, contrastive self-supervised ConvRNN-encoder-based EADs, trained with tactile-specific augmentations, match supervised neural fits, serving as an ethologically-relevant, label-free proxy. For neuroscience, our findings highlight nonlinear recurrent processing as important for general-purpose tactile representations in somatosensory cortex, providing the first quantitative characterization of the underlying inductive biases in this system. For embodied AI, our results emphasize the importance of recurrent EAD architectures to handle realistic tactile inputs, along with tailored self-supervised learning methods for achieving robust tactile perception with the same type of sensors animals use to sense in unstructured environments.

Working memory (WM) supports the temporary retention of task-relevant information. It is limited in capacity and inherently noisy. The ability to flexibly allocate WM resource is a hallmark of adaptive behavior. While it is well established that WM resource can be prioritized via selective attention, whether they can be allocated based on reward incentive alone remains under debate--raising open questions about whether humans can efficiently allocate WM resource based on utility. To address this, we conducted behavioral experiments using orientations as stimuli.

The evolution of the human brain has led to the development of complex synaptic plasticity, enabling dynamic adaptation to a constantly evolving world.

Autonomy is a hallmark of animal intelligence, enabling adaptive and intelligent behavior in complex environments without relying on external reward or task structure. Existing reinforcement learning approaches to exploration in rewardfree environments, including a class of methods known as model-based intrinsic motivation, exhibit inconsistent exploration patterns and do not converge to an exploratory policy, thus failing to capture robust autonomous behaviors observed in animals. Moreover, systems neuroscience has largely overlooked the neural basis of autonomy, focusing instead on experimental paradigms where animals are motivated by external reward rather than engaging in ethological, naturalistic and task-independent behavior. To bridge these gaps, we introduce a novel model-based intrinsic drive explicitly designed after the principles of autonomous exploration in animals. Our method (3M-Progress) achieves animal-like exploration by tracking divergence between an online world model and a fixed prior learned from an ecological niche. To the best of our knowledge, we introduce the first autonomous embodied agent that predicts brain data entirely from self-supervised optimization of an intrinsic goal--without any behavioral or neural training data--demonstrating that 3M-Progress agents capture the explainable variance in behavioral patterns and whole-brain neural-glial dynamics recorded from autonomously behaving larval zebrafish, thereby providing the first goal-driven, population-level model of neural-glial computation. Our findings establish a computational framework connecting model-based intrinsic motivation to naturalistic behavior, providing a foundation for building artificial agents with animal-like autonomy.