We propose learning graph representations from 2D feature maps for visual recognition. Our method draws inspiration from region based recognition, and learns to transform a 2D image into a graph structure. The vertices of the graph define clusters of pixels (regions), and the edges measure the similarity between these clusters in a feature space. Our method further learns to propagate information across all vertices on the graph, and is able to project the learned graph representation back into 2D grids. Our graph representation facilitates reasoning beyond regular grids and can capture long range dependencies among regions. We demonstrate that our model can be trained from end-to-end, and is easily integrated into existing networks. Finally, we evaluate our method on three challenging recognition tasks: semantic segmentation, object detection and object instance segmentation. For all tasks, our method outperforms state-of-the-art methods.

Current state-of-the-art solutions for motion capture from a single camera are optimization driven: they optimize the parameters of a 3D human model so that its re-projection matches measurements in the video (e.g.

Segmentation of 3D images is a fundamental problem in biomedical image analysis. Deep learning (DL) approaches have achieved the state-of-the-art segmentation performance. To exploit the 3D contexts using neural networks, known DL segmentation methods, including 3D convolution, 2D convolution on the planes orthogonal to 2D slices, and LSTM in multiple directions, all suffer incompatibility with the highly anisotropic dimensions in common 3D biomedical images. In this paper, we propose a new DL framework for 3D image segmentation, based on a combination of a fully convolutional network (FCN) and a recurrent neural network (RNN), which are responsible for exploiting the intra-slice and inter-slice contexts, respectively. To our best knowledge, this is the first DL framework for 3D image segmentation that explicitly leverages 3D image anisotropism. Evaluating using a dataset from the ISBI Neuronal Structure Segmentation Challenge and in-house image stacks for 3D fungus segmentation, our approach achieves promising results, comparing to the known DL-based 3D segmentation approaches.

We introduce a new machine learning approach for image segmentation that uses a neural network to model the conditional energy of a segmentation given an image. Our approach, combinatorial energy learning for image segmentation (CELIS) places a particular emphasis on modeling the inherent combinatorial nature of dense image segmentation problems. We propose efficient algorithms for learning deep neural networks to model the energy function, and for local optimization of this energy in the space of supervoxel agglomerations. We extensively evaluate our method on a publicly available 3-D microscopy dataset with 25 billion voxels of ground truth data. On an 11 billion voxel test set, we find that our method improves volumetric reconstruction accuracy by more than 20% as compared to two state-of-the-art baseline methods: graph-based segmentation of the output of a 3-D convolutional neural network trained to predict boundaries, as well as a random forest classifier trained to agglomerate supervoxels that were generated by a 3-D convolutional neural network.

We present a framework for efficient perceptual inference that explicitly reasons about the segmentation of its inputs and features. Rather than being trained for any specific segmentation, our framework learns the grouping process in an unsupervised manner or alongside any supervised task. We enable a neural network to group the representations of different objects in an iterative manner through a differentiable mechanism. We achieve very fast convergence by allowing the system to amortize the joint iterative inference of the groupings and their representations. In contrast to many other recently proposed methods for addressing multi-object scenes, our system does not assume the inputs to be images and can therefore directly handle other modalities. We evaluate our method on multi-digit classification of very cluttered images that require texture segmentation. Remarkably our method achieves improved classification performance over convolutional networks despite being fully connected, by making use of the grouping mechanism. Furthermore, we observe that our system greatly improves upon the semi-supervised result of a baseline Ladder network on our dataset. These results are evidence that grouping is a powerful tool that can help to improve sample efficiency.

In multi-task learning, multiple tasks are solved jointly, sharing inductive bias between them. Multi-task learning is inherently a multi-objective problem because different tasks may conflict, necessitating a trade-off. A common compromise is to optimize a proxy objective that minimizes a weighted linear combination of per-task losses. However, this workaround is only valid when the tasks do not compete, which is rarely the case.

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Finally, feature-level alignment is performed between the aggregated domain and target domain while training the segmentation network.