The mechanosensory system of teeth is currently believed to partly rely on Odontoblast cells stimulation by fluid flow through a porosity network extending through dentin. Visualizing the smallest sub-microscopic porosity vessels therefore requires the highest achievable resolution from confocal fluorescence microscopy, the current gold standard. This considerably limits the extent of the field of view to very small sample regions. To overcome this limitation, we tested different deep learning (DL) super-resolution (SR) models to allow faster experimental acquisitions of lower resolution images and restore optimal image quality by post-processing. Three supervised 2D SR models (RCAN, pix2pix, FSRCNN) and one unsupervised (CycleGAN) were applied to a unique set of experimentally paired high- and low-resolution confocal images acquired with different sampling schemes, resulting in a pixel size increase of x2, x4, x8. Model performance was quantified using a broad set of similarity and distribution-based image quality assessment (IQA) metrics, which yielded inconsistent results that mostly contradicted our visual perception. This raises the question of the relevance of such generic metrics to efficiently target the specific structure of dental porosity. To resolve this conflicting information, the generated SR images were segmented taking into account the specific scales and morphology of the porosity network and analysed by comparing connected components. Additionally, the capacity of the SR models to preserve 3D porosity connectivity throughout the confocal image stacks was evaluated using graph analysis. This biology-driven assessment allowed a far better mechanistic interpretation of SR performance, highlighting differences in model sensitivity to weak intensity features and the impact of non-linearity in image generation, which explains the failure of standard IQA metrics.

This study investigates the application of Super-Resolution techniques in holographic microscopy to enhance quantitative phase imaging. An off-axis Mach-Zehnder interferometric setup was employed to capture interferograms. The study evaluates two Super-Resolution models, RCAN and Real-ESRGAN, for their effectiveness in reconstructing high-resolution interferograms from a microparticle-based dataset. The models were assessed using two primary approaches: image-based analysis for structural detail enhancement and morphological evaluation for maintaining sample integrity and phase map accuracy. The results demonstrate that RCAN achieves superior numerical precision, making it ideal for applications requiring highly accurate phase map reconstruction, while Real-ESRGAN enhances visual quality and structural coherence, making it suitable for visualization-focused applications. This study highlights the potential of Super-Resolution models in overcoming diffraction-imposed resolution limitations in holographic microscopy, opening the way for improved imaging techniques in biomedical diagnostics, materials science, and other high-precision fields.

To date, the best-performing blind super-resolution (SR) techniques follow one of two paradigms: A) generate and train a standard SR network on synthetic low-resolution - high-resolution (LR - HR) pairs or B) attempt to predict the degradations an LR image has suffered and use these to inform a customised SR network. Despite significant progress, subscribers to the former miss out on useful degradation information that could be used to improve the SR process. On the other hand, followers of the latter rely on weaker SR networks, which are significantly outperformed by the latest architectural advancements. In this work, we present a framework for combining any blind SR prediction mechanism with any deep SR network, using a metadata insertion block to insert prediction vectors into SR network feature maps. Through comprehensive testing, we prove that state-of-the-art contrastive and iterative prediction schemes can be successfully combined with high-performance SR networks such as RCAN and HAN within our framework. We show that our hybrid models consistently achieve stronger SR performance than both their non-blind and blind counterparts. Furthermore, we demonstrate our framework's robustness by predicting degradations and super-resolving images from a complex pipeline of blurring, noise and compression.

Super-resolution (SR) aims to increase the resolution of imagery. Applications include security, medical imaging, and object recognition. We propose a deep learning-based SR system that takes a hexagonally sampled low-resolution image as an input and generates a rectangularly sampled SR image as an output. For training and testing, we use a realistic observation model that includes optical degradation from diffraction and sensor degradation from detector integration. Our SR approach first uses non-uniform interpolation to partially upsample the observed hexagonal imagery and convert it to a rectangular grid. We then leverage a state-of-the-art convolutional neural network (CNN) architecture designed for SR known as Residual Channel Attention Network (RCAN). In particular, we use RCAN to further upsample and restore the imagery to produce the final SR image estimate. We demonstrate that this system is superior to applying RCAN directly to rectangularly sampled LR imagery with equivalent sample density. The theoretical advantages of hexagonal sampling are well known. However, to the best of our knowledge, the practical benefit of hexagonal sampling in light of modern processing techniques such as RCAN SR is heretofore untested. Our SR system demonstrates a notable advantage of hexagonally sampled imagery when employing a modified RCAN for hexagonal SR.