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Brain Tumor Recurrence vs. Radiation Necrosis Classification and Patient Survivability Prediction

Sadique, M. S., Farzana, W., Temtam, A., Lappinen, E., Vossough, A., Iftekharuddin, K. M.

arXiv.org Artificial Intelligence

GBM (Glioblastoma multiforme) is the most aggressive type of brain tumor in adults that has a short survival rate even after aggressive treatment with surgery and radiation therapy. The changes on magnetic resonance imaging (MRI) for patients with GBM after radiotherapy are indicative of either radiation-induced necrosis (RN) or recurrent brain tumor (rBT). Screening for rBT and RN at an early stage is crucial for facilitating faster treatment and better outcomes for the patients. Differentiating rBT from RN is challenging as both may present with similar radiological and clinical characteristics on MRI. Moreover, learning-based rBT versus RN classification using MRI may suffer from class imbalance due to lack of patient data. While synthetic data generation using generative models has shown promise to address class imbalance, the underlying data representation may be different in synthetic or augmented data. This study proposes computational modeling with statistically rigorous repeated random sub-sampling to balance the subset sample size for rBT and RN classification. The proposed pipeline includes multiresolution radiomic feature (MRF) extraction followed by feature selection with statistical significance testing (p<0.05). The five-fold cross validation results show the proposed model with MRF features classifies rBT from RN with an area under the curve (AUC) of 0.8920+-.055. Moreover, considering the dependence between survival time and censor time (where patients are not followed up until death), we demonstrate the feasibility of using MRF radiomic features as a non-invasive biomarker to identify patients who are at higher risk of recurrence or radiation necrosis. The cross-validated results show that the MRF model provides the best overall performance with an AUC of 0.770+-.032.


Using Machine Learning to Distinguish Brain Tumor Progression From Pseudoprogression on Routine MRI

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Cleveland Clinic is a non-profit academic medical center. Advertising on our site helps support our mission. For over a century, malignant brain tumors such as glioblastoma (GBM) have carried a dismal prognosis. The most recent substantial advance has been provided by surgical resection and chemoradiation followed by adjuvant temozolomide therapy. Yet a problem during the requisite post-treatment surveillance imaging is that the brain's reaction to heavy doses of radiation can mimic the appearance of true tumor progression on MRI (Figure 1).


Machine learning and glioma imaging biomarkers

Booth, Thomas, Williams, Matthew, Luis, Aysha, Cardoso, Jorge, Keyoumars, Ashkan, Shuaib, Haris

arXiv.org Machine Learning

Aim: To review how machine learning (ML) is applied to imaging biomarkers in neuro-oncology, in particular for diagnosis, prognosis, and treatment response monitoring. Materials and Methods: The PubMed and MEDLINE databases were searched for articles published before September 2018 using relevant search terms. The search strategy focused on articles applying ML to high-grade glioma biomarkers for treatment response monitoring, prognosis, and prediction. Results: Magnetic resonance imaging (MRI) is typically used throughout the patient pathway because routine structural imaging provides detailed anatomical and pathological information and advanced techniques provide additional physiological detail. Using carefully chosen image features, ML is frequently used to allow accurate classification in a variety of scenarios. Rather than being chosen by human selection, ML also enables image features to be identified by an algorithm. Much research is applied to determining molecular profiles, histological tumour grade, and prognosis using MRI images acquired at the time that patients first present with a brain tumour. Differentiating a treatment response from a post-treatment-related effect using imaging is clinically important and also an area of active study (described here in one of two Special Issue publications dedicated to the application of ML in glioma imaging). Conclusion: Although pioneering, most of the evidence is of a low level, having been obtained retrospectively and in single centres. Studies applying ML to build neuro-oncology monitoring biomarker models have yet to show an overall advantage over those using traditional statistical methods. Development and validation of ML models applied to neuro-oncology require large, well-annotated datasets, and therefore multidisciplinary and multi-centre collaborations are necessary.


New computer program beats physicians at brain cancer diagnoses, could eliminate costly and risky brain biopsies

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Computer programs have defeated humans in Jeopardy!, chess and Go. Now a program developed at Case Western Reserve University has outperformed physicians on a more serious matter. The program was nearly twice as accurate as two neuroradiologists in determining whether abnormal tissue seen on magnetic resonance images (MRI) were dead brain cells caused by radiation, called radiation necrosis, or if brain cancer had returned. The direct comparison is part of a feasibility study published in the American Journal of Neuroradiology today. "One of the biggest challenges with the evaluation of brain tumor treatment is distinguishing between the confounding effects of radiation and cancer recurrence," said Pallavi Tiwari, assistant professor of biomedical engineering at Case Western Reserve and leader of the study.


Computer Program Beats Doctors at Brain Cancer Diagnosis

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MRI scans of patients with radiation necrosis (above) and cancer recurrence (below) are shown in the left column. Close-ups in the center column show the regions are indistinguishable on routine scans. Radiomic descriptors unearth subtle differences showing radiation necrosis, in the upper right panel, has less heterogeneity, shown in blue, compared to cancer recurrence, in the lower right, which has a much higher degree of heterogeneity, shown in red.