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Evaluating link prediction: New perspectives and recommendations
Kalyani, Bhargavi I, Mathi, A Rama Prasad, Sett, Niladri
Link prediction (LP) is an important problem in network science and machine learning research. The state-of-the-art LP methods are usually evaluated in a uniform setup, ignoring several factors associated with the data and application specific needs. We identify a number of such factors, such as, network-type, problem-type, geodesic distance between the end nodes and its distribution over the classes, nature and applicability of LP methods, class imbalance and its impact on early retrieval, evaluation metric, etc., and present an experimental setup which allows us to evaluate LP methods in a rigorous and controlled manner. We perform extensive experiments with a variety of LP methods over real network datasets in this controlled setup, and gather valuable insights on the interactions of these factors with the performance of LP through an array of carefully designed hypotheses. Following the insights, we provide recommendations to be followed as best practice for evaluating LP methods.
Online Bandit Learning with Offline Preference Data
Agnihotri, Akhil, Jain, Rahul, Ramachandran, Deepak, Wen, Zheng
Reinforcement Learning with Human Feedback (RLHF) is at the core of fine-tuning methods for generative AI models for language and images. Such feedback is often sought as rank or preference feedback from human raters, as opposed to eliciting scores since the latter tends to be very noisy. On the other hand, RL theory and algorithms predominantly assume that a reward feedback is available. In particular, approaches for online learning that can be helpful in adaptive data collection via active learning cannot incorporate offline preference data. In this paper, we adopt a finite-armed linear bandit model as a prototypical model of online learning. We consider an offline preference dataset to be available generated by an expert of unknown 'competence'. We propose $\texttt{warmPref-PS}$, a posterior sampling algorithm for online learning that can be warm-started with an offline dataset with noisy preference feedback. We show that by modeling the competence of the expert that generated it, we are able to use such a dataset most effectively. We support our claims with novel theoretical analysis of its Bayesian regret, as well as extensive empirical evaluation of an approximate algorithm which performs substantially better (almost 25 to 50% regret reduction in our studies) as compared to baselines.
Causal Discovery with Generalized Linear Models through Peeling Algorithms
Wang, Minjie, Shen, Xiaotong, Pan, Wei
This article presents a novel method for causal discovery with generalized structural equation models suited for analyzing diverse types of outcomes, including discrete, continuous, and mixed data. Causal discovery often faces challenges due to unmeasured confounders that hinder the identification of causal relationships. The proposed approach addresses this issue by developing two peeling algorithms (bottom-up and top-down) to ascertain causal relationships and valid instruments. This approach first reconstructs a super-graph to represent ancestral relationships between variables, using a peeling algorithm based on nodewise GLM regressions that exploit relationships between primary and instrumental variables. Then, it estimates parent-child effects from the ancestral relationships using another peeling algorithm while deconfounding a child's model with information borrowed from its parents' models. The article offers a theoretical analysis of the proposed approach, which establishes conditions for model identifiability and provides statistical guarantees for accurately discovering parent-child relationships via the peeling algorithms. Furthermore, the article presents numerical experiments showcasing the effectiveness of our approach in comparison to state-of-the-art structure learning methods without confounders. Lastly, it demonstrates an application to Alzheimer's disease (AD), highlighting the utility of the method in constructing gene-to-gene and gene-to-disease regulatory networks involving Single Nucleotide Polymorphisms (SNPs) for healthy and AD subjects.
Sound propagation in realistic interactive 3D scenes with parameterized sources using deep neural operators
Borrel-Jensen, Nikolas, Goswami, Somdatta, Engsig-Karup, Allan P., Karniadakis, George Em, Jeong, Cheol-Ho
We address the challenge of sound propagation simulations in $3$D virtual rooms with moving sources, which have applications in virtual/augmented reality, game audio, and spatial computing. Solutions to the wave equation can describe wave phenomena such as diffraction and interference. However, simulating them using conventional numerical discretization methods with hundreds of source and receiver positions is intractable, making stimulating a sound field with moving sources impractical. To overcome this limitation, we propose using deep operator networks to approximate linear wave-equation operators. This enables the rapid prediction of sound propagation in realistic 3D acoustic scenes with moving sources, achieving millisecond-scale computations. By learning a compact surrogate model, we avoid the offline calculation and storage of impulse responses for all relevant source/listener pairs. Our experiments, including various complex scene geometries, show good agreement with reference solutions, with root mean squared errors ranging from 0.02 Pa to 0.10 Pa. Notably, our method signifies a paradigm shift as no prior machine learning approach has achieved precise predictions of complete wave fields within realistic domains. We anticipate that our findings will drive further exploration of deep neural operator methods, advancing research in immersive user experiences within virtual environments.
Analysis of the Optimization Landscapes for Overcomplete Representation Learning
Qu, Qing, Zhai, Yuexiang, Li, Xiao, Zhang, Yuqian, Zhu, Zhihui
We study nonconvex optimization landscapes for learning overcomplete representations, including learning (i) sparsely used overcomplete dictionaries and (ii) convolutional dictionaries, where these unsupervised learning problems find many applications in high-dimensional data analysis. Despite the empirical success of simple nonconvex algorithms, theoretical justifications of why these methods work so well are far from satisfactory. In this work, we show these problems can be formulated as $\ell^4$-norm optimization problems with spherical constraint, and study the geometric properties of their nonconvex optimization landscapes. For both problems, we show the nonconvex objectives have benign (global) geometric structures, in the sense that every local minimizer is close to one of the target solutions and every saddle point exhibits negative curvature. This discovery enables the development of guaranteed global optimization methods using simple initializations. For both problems, we show the nonconvex objectives have benign geometric structures -- every local minimizer is close to one of the target solutions and every saddle point exhibits negative curvature -- either in the entire space or within a sufficiently large region. This discovery ensures local search algorithms (such as Riemannian gradient descent) with simple initializations approximately find the target solutions. Finally, numerical experiments justify our theoretical discoveries.
Adams Conditioning and Likelihood Ratio Transfer Mediated Inference
Bayesian inference as applied in a legal setting is about belief transfer and involves a plurality of agents and communication protocols. A forensic expert (FE) may communicate to a trier of fact (TOF) first its value of a certain likelihood ratio with respect to FE's belief state as represented by a probability function on FE's proposition space. Subsequently FE communicates its recently acquired confirmation that a certain evidence proposition is true. Then TOF performs likelihood ratio transfer mediated reasoning thereby revising their own belief state. The logical principles involved in likelihood transfer mediated reasoning are discussed in a setting where probabilistic arithmetic is done within a meadow, and with Adams conditioning placed in a central role.
Doubly Robust Bayesian Inference for Non-Stationary Streaming Data with $\beta$-Divergences
Knoblauch, Jeremias, Jewson, Jack, Damoulas, Theodoros
We present the very first robust Bayesian Online Changepoint Detection algorithm through General Bayesian Inference (GBI) with $\beta$-divergences. The resulting inference procedure is doubly robust for both the predictive and the changepoint (CP) posterior, with linear time and constant space complexity. We provide a construction for exponential models and demonstrate it on the Bayesian Linear Regression model. In so doing, we make two additional contributions: Firstly, we make GBI scalable using Structural Variational approximations that are exact as $\beta \to 0$. Secondly, we give a principled way of choosing the divergence parameter $\beta$ by minimizing expected predictive loss on-line. We offer the state of the art and improve the False Discovery Rate of CPs by more than 80% on real world data.
Guide Actor-Critic for Continuous Control
Tangkaratt, Voot, Abdolmaleki, Abbas, Sugiyama, Masashi
Actor-critic methods solve reinforcement learning problems by updating a parameterized policy known as an actor in a direction that increases an estimate of the expected return known as a critic. However, existing actor-critic methods only use values or gradients of the critic to update the policy parameter. In this paper, we propose a novel actor-critic method called the guide actor-critic (GAC). GAC firstly learns a guide actor that locally maximizes the critic and then it updates the policy parameter based on the guide actor by supervised learning. Our main theoretical contributions are two folds. First, we show that GAC updates the guide actor by performing second-order optimization in the action space where the curvature matrix is based on the Hessians of the critic. Second, we show that the deterministic policy gradient method is a special case of GAC when the Hessians are ignored. Through experiments, we show that our method is a promising reinforcement learning method for continuous controls.