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QueST: Querying Functional and Structural Niches on Spatial Transcriptomics Data via Contrastive Subgraph Embedding

Chen, Mo, Hao, Minsheng, Zhang, Xuegong, Wei, Lei

arXiv.org Artificial Intelligence

The functional or structural spatial regions within tissues, referred to as spatial niches, are elements for illustrating the spatial contexts of multicellular organisms. A key challenge is querying shared niches across diverse tissues, which is crucial for achieving a comprehensive understanding of the organization and phenotypes of cell populations. However, current data analysis methods predominantly focus on creating spatial-aware embeddings for cells, neglecting the development of niche-level representations for effective querying. To address this gap, we introduce QueST, a novel niche representation learning model designed for querying spatial niches across multiple samples. QueST utilizes a novel subgraph contrastive learning approach to explicitly capture niche-level characteristics and incorporates adversarial training to mitigate batch effects. We evaluate QueST on established benchmarks using human and mouse datasets, demonstrating its superiority over state-of-the-art graph representation learning methods in accurate niche queries. Overall, QueST offers a specialized model for spatial niche queries, paving the way for deeper insights into the patterns and mechanisms of cell spatial organization across tissues. Source code can be found at https://github.com/cmhimself/QueST.


One Piece: From 'niche within a niche' to global phenomenon

BBC News

In the mid-1990s, manga (a term used for a range of Japanese comic books and graphic novels) was at its peak, with 1.34 billion manga collections sold in 1995. Popular titles of the time included Dragon Ball (about a martial artist on the search for magical orbs), Slam Dunk (about a basketball team) and Doraemon (about a time-travelling robotic cat). For Nakono, however, the One Piece comic series changed the industry. "Instead of relying on a haphazard, week-by-week method," he says, "it carefully built up characters, creating a story structure that leads to an emotional climax at the end." "There was a strong emphasis on cliffhangers in manga before One Piece," he continues.

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  Industry: Leisure & Entertainment > Sports > Basketball (0.60)

Exploiting Preferences in Loss Functions for Sequential Recommendation via Weak Transitivity

Chung, Hyunsoo, Kim, Jungtaek, Jo, Hyungeun, Choi, Hyungwon

arXiv.org Artificial Intelligence

A choice of optimization objective is immensely pivotal in the design of a recommender system as it affects the general modeling process of a user's intent from previous interactions. Existing approaches mainly adhere to three categories of loss functions: pairwise, pointwise, and setwise loss functions. Despite their effectiveness, a critical and common drawback of such objectives is viewing the next observed item as a unique positive while considering all remaining items equally negative. Such a binary label assignment is generally limited to assuring a higher recommendation score of the positive item, neglecting potential structures induced by varying preferences between other unobserved items. To alleviate this issue, we propose a novel method that extends original objectives to explicitly leverage the different levels of preferences as relative orders between their scores. Finally, we demonstrate the superior performance of our method compared to baseline objectives.


Polyend Tracker Review: Powerful but Niche

WIRED

Polyend's Tracker is a significant update to its powerful (if somewhat anachronistic) sample-based groovebox, the Tracker. What made the Tracker so unique, and also confounding, was that it was a tracker (small t), but in hardware form. Trackers were an early form of music-making software that emerged in the late '80s. They were initially used mainly for video game music but eventually found favor with a certain strain of electronic musicians, most famously Aphex Twin. They're very much a product of their time though, designed to work around the limitations of late 20th century personal computers like the Amiga.


The Morning After: Tesla jailbreak could enable Full Self-Driving for free

Engadget

Security researchers believe they have found a hardware exploit to unlock upgrades to a Tesla that normally require plenty of extra cash. By messing with the voltage of the infotainment system, they were able to inject their code, bypassing its normal security. That enabled them to access personal data, including GPS tracking and call logs, as well as the car's encryption key. That, the researchers claim, could be the key to unlocking paywalled features, like the mode known as Full Self-Driving, which you presently have to pay extra to use. That's not the only slice of bad news on Tesla's breakfast plate today; it also stands accused of fraud.


'The future is bleak': how AI concerns are shaping graduate career choices

The Guardian

Ronan Carolan has always been the creative type, and after attending an art school's open day last autumn he thought he had settled on illustration as a degree. But as the Ucas deadline approached, he began to have second thoughts. "I noticed more and more things drawn by AI," he says, referring to a magazine cover among other examples. "Considering that only a few years ago, the images it generated were entirely nonsensical, it is scary how fast it has progressed." Carolan, who is 18 and has just completed an art foundation course in Cardiff, decided architecture would be a safer path to follow.


The future of generative AI is niche, not generalized

MIT Technology Review

Whether or not this really amounts to an "iPhone moment" or a serious threat to Google search isn't obvious at present -- while it will likely push a change in user behaviors and expectations, the first shift will be organizations pushing to bring tools trained on large language models (LLMs) to learn from their own data and services. And this, ultimately, is the key -- the significance and value of generative AI today is not really a question of societal or industry-wide transformation. It's instead a question of how this technology can open up new ways of interacting with large and unwieldy amounts of data and information. OpenAI is clearly attuned to this fact and senses a commercial opportunity: although the list of organizations taking part in the ChatGPT plugin initiative is small, OpenAI has opened up a waiting list where companies can sign up to gain access to the plugins. In the months to come, we will no doubt see many new products and interfaces backed by OpenAI's generative AI systems.


how-to-make-online-money-in-2023.html

#artificialintelligence

Blogging has become a popular way to make money online. With the rise of technology and the internet, anyone with a passion for writing can become a blogger and earn an income. In this article, we will discuss how to make money through Blogger and ChatGPT. Blogger is a free platform that allows users to create their own blog. It is owned by Google and is one of the most popular blogging platforms in the world. ChatGPT, on the other hand, is an AI-powered chatbot that can assist users in various ways.


Tackling Neural Architecture Search With Quality Diversity Optimization

Schneider, Lennart, Pfisterer, Florian, Kent, Paul, Branke, Juergen, Bischl, Bernd, Thomas, Janek

arXiv.org Artificial Intelligence

Neural architecture search (NAS) has been studied extensively and has grown to become a research field with substantial impact. While classical single-objective NAS searches for the architecture with the best performance, multi-objective NAS considers multiple objectives that should be optimized simultaneously, e.g., minimizing resource usage along the validation error. Although considerable progress has been made in the field of multi-objective NAS, we argue that there is some discrepancy between the actual optimization problem of practical interest and the optimization problem that multi-objective NAS tries to solve. We resolve this discrepancy by formulating the multi-objective NAS problem as a quality diversity optimization (QDO) problem and introduce three quality diversity NAS optimizers (two of them belonging to the group of multifidelity optimizers), which search for high-performing yet diverse architectures that are optimal for application-specific niches, e.g., hardware constraints. By comparing these optimizers to their multi-objective counterparts, we demonstrate that quality diversity NAS in general outperforms multi-objective NAS with respect to quality of solutions and efficiency. We further show how applications and future NAS research can thrive on QDO.


Introducing GitHub copilot, and how to install it

#artificialintelligence

If you are a programmer, you have probably dreamt of being able to create amazing programs, without getting your hand so dirty and avoiding writing all the boring and repetitive code. This is what Github Copilot has been developed for. It is a powerful AI, that can help you generate code with only some non-code-related hints. Github Copilop is an AI assistant, that can automatically generate high-performance code, according to developers' necessities. The tool is mainly developed in Python ( 88,9%) and Ruby (11,1%).