Goto

Collaborating Authors

 neuroscience


Point process latent variable models of larval zebrafish behavior

Neural Information Processing Systems

A fundamental goal of systems neuroscience is to understand how neural activity gives rise to natural behavior. In order to achieve this goal, we must first build comprehensive models that offer quantitative descriptions of behavior. We develop a new class of probabilistic models to tackle this challenge in the study of larval zebrafish, an important model organism for neuroscience. Larval zebrafish locomote via sequences of punctate swim bouts--brief flicks of the tail--which are naturally modeled as a marked point process. However, these sequences of swim bouts belie a set of discrete and continuous internal states, latent variables that are not captured by standard point process models. We incorporate these variables as latent marks of a point process and explore various models for their dynamics. To infer the latent variables and fit the parameters of this model, we develop an amortized variational inference algorithm that targets the collapsed posterior distribution, analytically marginalizing out the discrete latent variables. With a dataset of over 120,000 swim bouts, we show that our models reveal interpretable discrete classes of swim bouts and continuous internal states like hunger that modulate their dynamics. These models are a major step toward understanding the natural behavioral program of the larval zebrafish and, ultimately, its neural underpinnings.









Why some people cannot move on from the death of a loved one

New Scientist

Prolonged grief disorder affects around 1 in 20 people, and we're starting to understand the neuroscience behind it For most people, the intense sting of grief eases with time. For some, however, persistent and painful grief remains, developing into prolonged grief disorder. A new review of the condition, which affects around 5 per cent of bereaved people, sheds light on how it develops. This could help doctors predict which recently bereaved people will benefit from extra support. The decision to include prolonged grief disorder (PGD) in the American Psychiatric Association's diagnostic manual in 2022 sparked intense debate over whether it was pathologising a normal human response to loss and imposing an arbitrary timeline on what constitutes "normal" grief.