Therapeutic antibodies are an essential and rapidly expanding drug modality.

Therapeutic antibodies are an essential and rapidly flourishing drug modality. The binding specificity between antibodies and antigens is decided by complementarity-determining regions (CDRs) at the tips of these Y-shaped proteins. In this paper, we propose a \textbf{h}ierarchical \textbf{t}raining \textbf{p}aradigm (HTP) for the antibody sequence-structure co-design. HTP consists of four levels of training stages, each corresponding to a specific protein modality within a particular protein domain. Through carefully crafted tasks in different stages, HTP seamlessly and effectively integrates geometric graph neural networks (GNNs) with large-scale protein language models to excavate evolutionary information from not only geometric structures but also vast antibody and non-antibody sequence databases, which determines ligand binding pose and strength. Empirical experiments show HTP sets the new state-of-the-art performance in the co-design problem as well as the fix-backbone design. Our research offers a hopeful path to unleash the potential of deep generative architectures and seeks to illuminate the way forward for the antibody sequence and structure co-design challenge.

This paper introduces the Harmonic Token Projection (HTP), a reversible and deterministic framework for generating text embeddings without training, vocabularies, or stochastic parameters. Unlike neural embeddings that rely on statistical co-occurrence or optimization, HTP encodes each token analytically as a harmonic trajectory derived from its Unicode integer representation, establishing a bijective and interpretable mapping between discrete symbols and continuous vector space. The harmonic formulation provides phase-coherent projections that preserve both structure and reversibility, enabling semantic similarity estimation from purely geometric alignment. Experimental evaluation on the Semantic Textual Similarity Benchmark (STS-B) and its multilingual extension shows that HTP achieves a Spearman correlation of \r{ho} = 0.68 in English, maintaining stable performance across ten languages with negligible computational cost and sub-millisecond latency per sentence pair. This demonstrates that meaningful semantic relations can emerge from deterministic geometry, offering a transparent and efficient alternative to data-driven embeddings. Keywords: Harmonic Token Projection, reversible embedding, deterministic encoding, semantic similarity, multilingual representation.

The HTP-style methods have been shown to have strong approximation guarantee and impressive numerical performance in high dimensional statistical learning applications. However, the current theoretical treatment of these methods has traditionally been restricted to the analysis of parameter estimation consistency. It remains an open problem to analyze the support recovery performance (a.k.a., sparsistency) of this type of methods for recovering the global minimizer of the original NP-hard problem. In this paper, we bridge this gap by showing, for the first time, that exact recovery of the global sparse minimizer is possible for HTP-style methods under restricted strong condition number bounding conditions. We further show that HTP-style methods are able to recover the support of certain relaxed sparse solutions without assuming bounded restricted strong condition number. Numerical results on simulated data confirms our theoretical predictions.

Large language models produce powerful text embeddings, but their causal attention mechanism restricts the flow of information from later to earlier tokens, degrading representation quality. While recent methods attempt to solve this by prepending a single summary token, they over-compress information, hence harming performance on long documents. We propose Hierarchical Token Prepending (HTP), a method that resolves two critical bottlenecks. To mitigate attention-level compression, HTP partitions the input into blocks and prepends block-level summary tokens to subsequent blocks, creating multiple pathways for backward information flow. To address readout-level over-squashing, we replace last-token pooling with mean-pooling, a choice supported by theoretical analysis. HTP achieves consistent performance gains across 11 retrieval datasets and 30 general embedding benchmarks, especially in long-context settings. As a simple, architecture-agnostic method, HTP enhances both zero-shot and finetuned models, offering a scalable route to superior long-document embeddings.

Therapeutic antibodies are an essential and rapidly flourishing drug modality. The binding specificity between antibodies and antigens is decided by complementarity-determining regions (CDRs) at the tips of these Y-shaped proteins. In this paper, we propose a \textbf{h}ierarchical \textbf{t}raining \textbf{p}aradigm (HTP) for the antibody sequence-structure co-design. HTP consists of four levels of training stages, each corresponding to a specific protein modality within a particular protein domain. Through carefully crafted tasks in different stages, HTP seamlessly and effectively integrates geometric graph neural networks (GNNs) with large-scale protein language models to excavate evolutionary information from not only geometric structures but also vast antibody and non-antibody sequence databases, which determines ligand binding pose and strength.

Left-behind children (LBCs), numbering over 66 million in China, face severe mental health challenges due to parental migration for work. Early screening and identification of at-risk LBCs is crucial, yet challenging due to the severe shortage of mental health professionals, especially in rural areas. While the House-Tree-Person (HTP) test shows higher child participation rates, its requirement for expert interpretation limits its application in resource-scarce regions. To address this challenge, we propose PsyDraw, a multi-agent system based on Multimodal Large Language Models that assists mental health professionals in analyzing HTP drawings. The system employs specialized agents for feature extraction and psychological interpretation, operating in two stages: comprehensive feature analysis and professional report generation. Evaluation of HTP drawings from 290 primary school students reveals that 71.03% of the analyzes achieved High Consistency with professional evaluations, 26.21% Moderate Consistency and only 2.41% Low Consistency. The system identified 31.03% of cases requiring professional attention, demonstrating its effectiveness as a preliminary screening tool. Currently deployed in pilot schools, \method shows promise in supporting mental health professionals, particularly in resource-limited areas, while maintaining high professional standards in psychological assessment.