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Health system learning achieves generalist neuroimaging models

Kondepudi, Akhil, Rao, Akshay, Zhao, Chenhui, Lyu, Yiwei, Harake, Samir, Banerjee, Soumyanil, Joshi, Rushikesh, Meissner, Anna-Katharina, Hou, Renly, Jiang, Cheng, Chowdury, Asadur, Srinivasan, Ashok, Athey, Brian, Gulani, Vikas, Pandey, Aditya, Lee, Honglak, Hollon, Todd

arXiv.org Artificial Intelligence

Frontier artificial intelligence (AI) models, such as OpenAI's GPT-5 and Meta's DINOv3, have advanced rapidly through training on internet-scale public data, yet such systems lack access to private clinical data. Neuroimaging, in particular, is underrepresented in the public domain due to identifiable facial features within MRI and CT scans, fundamentally restricting model performance in clinical medicine. Here, we show that frontier models underperform on neuroimaging tasks and that learning directly from uncurated data generated during routine clinical care at health systems, a paradigm we call health system learning, yields high-performance, generalist neuroimaging models. We introduce NeuroVFM, a visual foundation model trained on 5.24 million clinical MRI and CT volumes using a scalable volumetric joint-embedding predictive architecture. NeuroVFM learns comprehensive representations of brain anatomy and pathology, achieving state-of-the-art performance across multiple clinical tasks, including radiologic diagnosis and report generation. The model exhibits emergent neuroanatomic understanding and interpretable visual grounding of diagnostic findings. When paired with open-source language models through lightweight visual instruction tuning, NeuroVFM generates radiology reports that surpass frontier models in accuracy, clinical triage, and expert preference. Through clinically grounded visual understanding, NeuroVFM reduces hallucinated findings and critical errors, offering safer clinical decision support. These results establish health system learning as a paradigm for building generalist medical AI and provide a scalable framework for clinical foundation models.


A Multi-agent Large Language Model Framework to Automatically Assess Performance of a Clinical AI Triage Tool

Flanders, Adam E., Peng, Yifan, Prevedello, Luciano, Ball, Robyn, Colak, Errol, Menon, Prahlad, Shih, George, Lin, Hui-Ming, Lakhani, Paras

arXiv.org Artificial Intelligence

Purpose: The purpose of this study was to determine if an ensemble of multiple LLM agents could be used collectively to provide a more reliable assessment of a pixel-based AI triage tool than a single LLM. Methods: 29,766 non-contrast CT head exams from fourteen hospitals were processed by a commercial intracranial hemorrhage (ICH) AI detection tool. Radiology reports were analyzed by an ensemble of eight open-source LLM models and a HIPAA compliant internal version of GPT-4o using a single multi-shot prompt that assessed for presence of ICH. 1,726 examples were manually reviewed. Performance characteristics of the eight open-source models and consensus were compared to GPT-4o. Three ideal consensus LLM ensembles were tested for rating the performance of the triage tool. Results: The cohort consisted of 29,766 head CTs exam-report pairs. The highest AUC performance was achieved with llama3.3:70b and GPT-4o (AUC= 0.78). The average precision was highest for Llama3.3:70b and GPT-4o (AP=0.75 & 0.76). Llama3.3:70b had the highest F1 score (0.81) and recall (0.85), greater precision (0.78), specificity (0.72), and MCC (0.57). Using MCC (95% CI) the ideal combination of LLMs were: Full-9 Ensemble 0.571 (0.552-0.591), Top-3 Ensemble 0.558 (0.537-0.579), Consensus 0.556 (0.539-0.574), and GPT4o 0.522 (0.500-0.543). No statistically significant differences were observed between Top-3, Full-9, and Consensus (p > 0.05). Conclusion: An ensemble of medium to large sized open-source LLMs provides a more consistent and reliable method to derive a ground truth retrospective evaluation of a clinical AI triage tool over a single LLM alone.


World's smallest 'bioprinter' is the size of a pill

Popular Science

World's smallest'bioprinter' is the size of a pill The ingestible device could help patients heal from the inside. This magnet guided'ingestible bioprinter' is the size of a large pill. Breakthroughs, discoveries, and DIY tips sent every weekday. When someone hears the word " bioprinter," it likely conjures up images of bulky hardware buzzing loudly on a desk in a brightly lit laboratory. But researchers from the École polytechnique fédérale de Lausanne (EPFL) School of Engineering are now turning that image on its head with the creation of what they are calling the world's first, pill-sized "ingestible bioprinter."


Neu-RadBERT for Enhanced Diagnosis of Brain Injuries and Conditions

Singh, Manpreet, Macrae, Sean, Williams, Pierre-Marc, Hung, Nicole, de Franca, Sabrina Araujo, Letourneau-Guillon, Laurent, Carrier, François-Martin, Liu, Bang, Cavayas, Yiorgos Alexandros

arXiv.org Artificial Intelligence

Objective: We sought to develop a classification algorithm to extract diagnoses from free-text radiology reports of brain imaging performed in patients with acute respiratory failure (ARF) undergoing invasive mechanical ventilation. Methods: We developed and fine-tuned Neu-RadBERT, a BERT-based model, to classify unstructured radiology reports. We extracted all the brain imaging reports (computed tomography and magnetic resonance imaging) from MIMIC-IV database, performed in patients with ARF. Initial manual labelling was performed on a subset of reports for various brain abnormalities, followed by fine-tuning Neu-RadBERT using three strategies: 1) baseline RadBERT, 2) Neu-RadBERT with Masked Language Modeling (MLM) pretraining, and 3) Neu-RadBERT with MLM pretraining and oversampling to address data skewness. We compared the performance of this model to Llama-2-13B, an autoregressive LLM. Results: The Neu-RadBERT model, particularly with oversampling, demonstrated significant improvements in diagnostic accuracy compared to baseline RadBERT for brain abnormalities, achieving up to 98.0% accuracy for acute brain injuries. Llama-2-13B exhibited relatively lower performance, peaking at 67.5% binary classification accuracy. This result highlights potential limitations of current autoregressive LLMs for this specific classification task, though it remains possible that larger models or further fine-tuning could improve performance. Conclusion: Neu-RadBERT, enhanced through target domain pretraining and oversampling techniques, offered a robust tool for accurate and reliable diagnosis of neurological conditions from radiology reports. This study underscores the potential of transformer-based NLP models in automatically extracting diagnoses from free text reports with potential applications to both research and patient care.


Examining Deployment and Refinement of the VIOLA-AI Intracranial Hemorrhage Model Using an Interactive NeoMedSys Platform

Liu, Qinghui, Nesvold, Jon E., Raaum, Hanna, Murugesu, Elakkyen, Røvang, Martin, Maclntosh, Bradley J, Bjørnerud, Atle, Skogen, Karoline

arXiv.org Artificial Intelligence

Background: There are many challenges and opportunities in the clinical deployment of AI tools in radiology. The current study describes a radiology software platform called NeoMedSys that can enable efficient deployment and refinements of AI models. We evaluated the feasibility and effectiveness of running NeoMedSys for three months in real-world clinical settings and focused on improvement performance of an in-house developed AI model (VIOLA-AI) designed for intracranial hemorrhage (ICH) detection. Methods: NeoMedSys integrates tools for deploying, testing, and optimizing AI models with a web-based medical image viewer, annotation system, and hospital-wide radiology information systems. A prospective pragmatic investigation was deployed using clinical cases of patients presenting to the largest Emergency Department in Norway (site-1) with suspected traumatic brain injury (TBI) or patients with suspected stroke (site-2). We assessed ICH classification performance as VIOLA-AI encountered new data and underwent pre-planned model retraining. Performance metrics included sensitivity, specificity, accuracy, and the area under the receiver operating characteristic curve (AUC). Results: NeoMedSys facilitated iterative improvements in the AI model, significantly enhancing its diagnostic accuracy. Automated bleed detection and segmentation were reviewed in near real-time to facilitate re-training VIOLA-AI. The iterative refinement process yielded a marked improvement in classification sensitivity, rising to 90.3% (from 79.2%), and specificity that reached 89.3% (from 80.7%). The bleed detection ROC analysis for the entire sample demonstrated a high area-under-the-curve (AUC) of 0.949 (from 0.873). Model refinement stages were associated with notable gains, highlighting the value of real-time radiologist feedback.


Single Domain Generalization in Diabetic Retinopathy: A Neuro-Symbolic Learning Approach

Urooj, Midhat, Banerjee, Ayan, Shaikh, Farhat, Thakur, Kuntal, Gupta, Sandeep

arXiv.org Artificial Intelligence

Domain generalization remains a critical challenge in medical imaging, where models trained on single sources often fail under real-world distribution shifts. We propose KG-DG, a neuro-symbolic framework for diabetic retinopathy (DR) classification that integrates vision transformers with expert-guided symbolic reasoning to enable robust generalization across unseen domains. Our approach leverages clinical lesion ontologies through structured, rule-based features and retinal vessel segmentation, fusing them with deep visual representations via a confidence-weighted integration strategy. The framework addresses both single-domain generalization (SDG) and multi-domain generalization (MDG) by minimizing the KL divergence between domain embeddings, thereby enforcing alignment of high-level clinical semantics. Extensive experiments across four public datasets (APTOS, EyePACS, Messidor-1, Messidor-2) demonstrate significant improvements: up to a 5.2% accuracy gain in cross-domain settings and a 6% improvement over baseline ViT models. Notably, our symbolic-only model achieves a 63.67% average accuracy in MDG, while the complete neuro-symbolic integration achieves the highest accuracy compared to existing published baselines and benchmarks in challenging SDG scenarios. Ablation studies reveal that lesion-based features (84.65% accuracy) substantially outperform purely neural approaches, confirming that symbolic components act as effective regularizers beyond merely enhancing interpretability. Our findings establish neuro-symbolic integration as a promising paradigm for building clinically robust, and domain-invariant medical AI systems.


Vision Transformer for Intracranial Hemorrhage Classification in CT Scans Using an Entropy-Aware Fuzzy Integral Strategy for Adaptive Scan-Level Decision Fusion

Chagahi, Mehdi Hosseini, Delfan, Niloufar, Moshiri, Behzad, Piran, Md. Jalil, Parikhan, Jaber Hatam

arXiv.org Artificial Intelligence

Intracranial hemorrhage (ICH) is a critical medical emergency caused by the rupture of cerebral blood vessels, leading to internal bleeding within the skull. Accurate and timely classification of hemorrhage subtypes is essential for effective clinical decision-making. To address this challenge, we propose an advanced pyramid vision transformer (PVT)-based model, leveraging its hierarchical attention mechanisms to capture both local and global spatial dependencies in brain CT scans. Instead of processing all extracted features indiscriminately, A SHAP-based feature selection method is employed to identify the most discriminative components, which are then used as a latent feature space to train a boosting neural network, reducing computational complexity. We introduce an entropy-aware aggregation strategy along with a fuzzy integral operator to fuse information across multiple CT slices, ensuring a more comprehensive and reliable scan-level diagnosis by accounting for inter-slice dependencies. Experimental results show that our PVT-based framework significantly outperforms state-of-the-art deep learning architectures in terms of classification accuracy, precision, and robustness. By combining SHAP-driven feature selection, transformer-based modeling, and an entropy-aware fuzzy integral operator for decision fusion, our method offers a scalable and computationally efficient AI-driven solution for automated ICH subtype classification.


3D Foundation AI Model for Generalizable Disease Detection in Head Computed Tomography

Zhu, Weicheng, Huang, Haoxu, Tang, Huanze, Musthyala, Rushabh, Yu, Boyang, Chen, Long, Vega, Emilio, O'Donnell, Thomas, Dehkharghani, Seena, Frontera, Jennifer A., Masurkar, Arjun V., Melmed, Kara, Razavian, Narges

arXiv.org Artificial Intelligence

Head computed tomography (CT) imaging is a widely-used imaging modality with multitudes of medical indications, particularly in assessing pathology of the brain, skull, and cerebrovascular system. It is commonly the first-line imaging in neurologic emergencies given its rapidity of image acquisition, safety, cost, and ubiquity. Deep learning models may facilitate detection of a wide range of diseases. However, the scarcity of high-quality labels and annotations, particularly among less common conditions, significantly hinders the development of powerful models. To address this challenge, we introduce FM-CT: a Foundation Model for Head CT for generalizable disease detection, trained using self-supervised learning. Our approach pre-trains a deep learning model on a large, diverse dataset of 361,663 non-contrast 3D head CT scans without the need for manual annotations, enabling the model to learn robust, generalizable features. To investigate the potential of self-supervised learning in head CT, we employed both discrimination with self-distillation and masked image modeling, and we construct our model in 3D rather than at the slice level (2D) to exploit the structure of head CT scans more comprehensively and efficiently. The model's downstream classification performance is evaluated using internal and three external datasets, encompassing both in-distribution (ID) and out-of-distribution (OOD) data. Our results demonstrate that the self-supervised foundation model significantly improves performance on downstream diagnostic tasks compared to models trained from scratch and previous 3D CT foundation models on scarce annotated datasets. This work highlights the effectiveness of self-supervised learning in medical imaging and sets a new benchmark for head CT image analysis in 3D, enabling broader use of artificial intelligence for head CT-based diagnosis.


Modality-Projection Universal Model for Comprehensive Full-Body Medical Imaging Segmentation

Chen, Yixin, Gao, Lin, Gao, Yajuan, Wang, Rui, Lian, Jingge, Meng, Xiangxi, Duan, Yanhua, Chai, Leiying, Han, Hongbin, Cheng, Zhaoping, Xie, Zhaoheng

arXiv.org Artificial Intelligence

The integration of deep learning in medical imaging has shown great promise for enhancing diagnostic, therapeutic, and research outcomes. However, applying universal models across multiple modalities remains challenging due to the inherent variability in data characteristics. This study aims to introduce and evaluate a Modality Projection Universal Model (MPUM). MPUM employs a novel modality-projection strategy, which allows the model to dynamically adjust its parameters to optimize performance across different imaging modalities. The MPUM demonstrated superior accuracy in identifying anatomical structures, enabling precise quantification for improved clinical decision-making. It also identifies metabolic associations within the brain-body axis, advancing research on brain-body physiological correlations. Furthermore, MPUM's unique controller-based convolution layer enables visualization of saliency maps across all network layers, significantly enhancing the model's interpretability.


AI-Powered Intracranial Hemorrhage Detection: A Co-Scale Convolutional Attention Model with Uncertainty-Based Fuzzy Integral Operator and Feature Screening

Chagahi, Mehdi Hosseini, Piran, Md. Jalil, Delfan, Niloufar, Moshiri, Behzad, Parikhan, Jaber Hatam

arXiv.org Artificial Intelligence

Intracranial hemorrhage (ICH) refers to the leakage or accumulation of blood within the skull, which occurs due to the rupture of blood vessels in or around the brain. If this condition is not diagnosed in a timely manner and appropriately treated, it can lead to serious complications such as decreased consciousness, permanent neurological disabilities, or even death.The primary aim of this study is to detect the occurrence or non-occurrence of ICH, followed by determining the type of subdural hemorrhage (SDH). These tasks are framed as two separate binary classification problems. By adding two layers to the co-scale convolutional attention (CCA) classifier architecture, we introduce a novel approach for ICH detection. In the first layer, after extracting features from different slices of computed tomography (CT) scan images, we combine these features and select the 50 components that capture the highest variance in the data, considering them as informative features. We then assess the discriminative power of these features using the bootstrap forest algorithm, discarding those that lack sufficient discriminative ability between different classes. This algorithm explicitly determines the contribution of each feature to the final prediction, assisting us in developing an explainable AI model. The features feed into a boosting neural network as a latent feature space. In the second layer, we introduce a novel uncertainty-based fuzzy integral operator to fuse information from different CT scan slices. This operator, by accounting for the dependencies between consecutive slices, significantly improves detection accuracy.