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Data-driven Crop Growth Simulation on Time-varying Generated Images using Multi-conditional Generative Adversarial Networks

Drees, Lukas, Demie, Dereje T., Paul, Madhuri R., Leonhardt, Johannes, Seidel, Sabine J., Döring, Thomas F., Roscher, Ribana

arXiv.org Machine Learning

Image-based crop growth modeling can substantially contribute to precision agriculture by revealing spatial crop development over time, which allows an early and location-specific estimation of relevant future plant traits, such as leaf area or biomass. A prerequisite for realistic and sharp crop image generation is the integration of multiple growth-influencing conditions in a model, such as an image of an initial growth stage, the associated growth time, and further information about the field treatment. We present a two-stage framework consisting first of an image prediction model and second of a growth estimation model, which both are independently trained. The image prediction model is a conditional Wasserstein generative adversarial network (CWGAN). In the generator of this model, conditional batch normalization (CBN) is used to integrate different conditions along with the input image. This allows the model to generate time-varying artificial images dependent on multiple influencing factors of different kinds. These images are used by the second part of the framework for plant phenotyping by deriving plant-specific traits and comparing them with those of non-artificial (real) reference images. For various crop datasets, the framework allows realistic, sharp image predictions with a slight loss of quality from short-term to long-term predictions. Simulations of varying growth-influencing conditions performed with the trained framework provide valuable insights into how such factors relate to crop appearances, which is particularly useful in complex, less explored crop mixture systems. Further results show that adding process-based simulated biomass as a condition increases the accuracy of the derived phenotypic traits from the predicted images. This demonstrates the potential of our framework to serve as an interface between an image- and process-based crop growth model.


GrowliFlower: An image time series dataset for GROWth analysis of cauLIFLOWER

#artificialintelligence

This article presents GrowliFlower, a georeferenced, image-based UAV time series dataset of two monitored cauliflower fields of size 0.39 and 0.60 ha acquired in 2020 and 2021. The dataset contains RGB and multispectral orthophotos from which about 14,000 individual plant coordinates are derived and provided. The coordinates enable the dataset users the extraction of complete and incomplete time series of image patches showing individual plants. The dataset contains collected phenotypic traits of 740 plants, including the developmental stage as well as plant and cauliflower size. As the harvestable product is completely covered by leaves, plant IDs and coordinates are provided to extract image pairs of plants pre and post defoliation, to facilitate estimations of cauliflower head size. Moreover, the dataset contains pixel-accurate leaf and plant instance segmentations, as well as stem annotations to address tasks like classification, detection, segmentation, instance segmentation, and similar computer vision tasks.