Evaluating the performance of causal discovery algorithms that aim to find causal relationships between time-dependent processes remains a challenging topic. In this paper, we show that certain characteristics of datasets, such as varsortability (Reisach et al. 2021) and $R^2$-sortability (Reisach et al. 2023), also occur in datasets for autocorrelated stationary time series. We illustrate this empirically using four types of data: simulated data based on SVAR models and Erd\H{o}s-R\'enyi graphs, the data used in the 2019 causality-for-climate challenge (Runge et al. 2019), real-world river stream datasets, and real-world data generated by the Causal Chamber of (Gamella et al. 2024). To do this, we adapt var- and $R^2$-sortability to time series data. We also investigate the extent to which the performance of score-based causal discovery methods goes hand in hand with high sortability. Arguably, our most surprising finding is that the investigated real-world datasets exhibit high varsortability and low $R^2$-sortability indicating that scales may carry a significant amount of causal information.

Discovering causal relationships between different variables from time series data has been a long-standing challenge for many domains such as climate science, finance, and healthcare. Given the complexity of real-world relationships and the nature of observations in discrete time, causal discovery methods need to consider non-linear relations between variables, instantaneous effects and history-dependent noise (the change of noise distribution due to past actions). However, previous works do not offer a solution addressing all these problems together. In this paper, we propose a novel causal relationship learning framework for time-series data, called Rhino, which combines vector auto-regression, deep learning and variational inference to model non-linear relationships with instantaneous effects while allowing the noise distribution to be modulated by historical observations. Theoretically, we prove the structural identifiability of Rhino. Our empirical results from extensive synthetic experiments and two real-world benchmarks demonstrate better discovery performance compared to relevant baselines, with ablation studies revealing its robustness under model misspecification.

In this paper, we revisit the structure learning problem for dynamic Bayesian networks and propose a method that simultaneously estimates contemporaneous (intra-slice) and time-lagged (inter-slice) relationships between variables in a time-series. Our approach is score-based, and revolves around minimizing a penalized loss subject to an acyclicity constraint. To solve this problem, we leverage a recent algebraic result characterizing the acyclicity constraint as a smooth equality constraint. The resulting algorithm, which we call DYNOTEARS, outperforms other methods on simulated data, especially in high-dimensions as the number of variables increases. We also apply this algorithm on real datasets from two different domains, finance and molecular biology, and analyze the resulting output. Compared to state-of-the-art methods for learning dynamic Bayesian networks, our method is both scalable and accurate on real data. The simple formulation, and competitive performance of our method make it suitable for a variety of problems where one seeks to learn connections between variables across time.