Recent advances in generative AI have led to increasingly realistic synthetic data, yet evaluation criteria remain focused on marginal distribution matching. While these diagnostics assess local realism, they provide limited insight into whether a generative model preserves the multivariate dependence structures governing downstream inference. We introduce covariance-level dependence fidelity as a practical criterion for evaluating whether a generative distribution preserves joint structure beyond univariate marginals. We establish three core results. First, distributions can match all univariate marginals exactly while exhibiting substantially different dependence structures, demonstrating marginal fidelity alone is insufficient. Second, dependence divergence induces quantitative instability in downstream inference, including sign reversals in regression coefficients despite identical marginal behavior. Third, explicit control of covariance-level dependence divergence ensures stable behavior for dependence-sensitive tasks such as principal component analysis. Synthetic constructions illustrate how dependence preservation failures lead to incorrect conclusions despite identical marginal distributions. These results highlight dependence fidelity as a useful diagnostic for evaluating generative models in dependence-sensitive downstream tasks, with implications for diffusion models and variational autoencoders. These guarantees apply specifically to procedures governed by covariance structure; tasks requiring higher-order dependence such as tail-event estimation require richer criteria.

In computational social science (CSS), researchers analyze documents to explain social and political phenomena. In most scenarios, CSS researchers first obtain labels for documents and then explain labels using interpretable regression analyses in the second step. One increasingly common way to annotate documents cheaply at scale is through large language models (LLMs). However, like other scalable ways of producing annotations, such surrogate labels are often imperfect and biased. We present a new algorithm for using imperfect annotation surrogates for downstream statistical analyses while guaranteeing statistical properties--like asymptotic unbiasedness and proper uncertainty quantification--which are fundamental to CSS research.

As artificial intelligence and machine learning tools become more accessible, and scientists face new obstacles to data collection (e.g., rising costs, declining survey response rates), researchers increasingly use predictions from pre-trained algorithms as substitutes for missing or unobserved data. Though appealing for financial and logistical reasons, using standard tools for inference can misrepresent the association between independent variables and the outcome of interest when the true, unobserved outcome is replaced by a predicted value. In this paper, we characterize the statistical challenges inherent to drawing inference with predicted data (IPD) and show that high predictive accuracy does not guarantee valid downstream inference. We show that all such failures reduce to statistical notions of (i) bias, when predictions systematically shift the estimand or distort relationships among variables, and (ii) variance, when uncertainty from the prediction model and the intrinsic variability of the true data are ignored. We then review recent methods for conducting IPD and discuss how this framework is deeply rooted in classical statistical theory. We then comment on some open questions and interesting avenues for future work in this area, and end with some comments on how to use predicted data in scientific studies that is both transparent and statistically principled.

Neurophysiological recordings such as electroencephalography (EEG) offer accessible and minimally invasive means of estimating physiological activity for applications in healthcare, diagnostic screening, and even immersive entertainment. However, these recordings yield high-dimensional, noisy time-series data that typically require extensive pre-processing and handcrafted feature extraction to reveal meaningful information. Recently, there has been a surge of interest in applying representation learning techniques from large pre-trained (foundation) models to effectively decode and interpret biosignals. We discuss the challenges posed for incorporating such methods and introduce BioCodec, an alternative representation learning framework inspired by neural codecs to capture low-level signal characteristics in the form of discrete tokens. Pre-trained on thousands of EEG hours, BioCodec shows efficacy across multiple downstream tasks, ranging from clinical diagnostic tasks and sleep physiology to decoding speech and motor imagery, particularly in low-resource settings. Additionally, we provide a qualitative analysis of codebook usage and estimate the spatial coherence of codebook embeddings from EEG connectivity. Notably, we also document the suitability of our method to other biosignal data, i.e., electromyographic (EMG) signals. Overall, the proposed approach provides a versatile solution for biosignal tokenization that performs competitively with state-of-the-art models. The source code and model checkpoints are shared.

In computational social science (CSS), researchers analyze documents to explain social and political phenomena. In most scenarios, CSS researchers first obtain labels for documents and then explain labels using interpretable regression analyses in the second step. One increasingly common way to annotate documents cheaply at scale is through large language models (LLMs). However, like other scalable ways of producing annotations, such surrogate labels are often imperfect and biased. We present a new algorithm for using imperfect annotation surrogates for downstream statistical analyses while guaranteeing statistical properties--like asymptotic unbiasedness and proper uncertainty quantification--which are fundamental to CSS research.