We appreciate your positive feedback and will revise our presentation accordingly. Prior to this work, the walk length of DeepWalk has to be selected by cross-validation. Thank you for your comments. We appreciate your views and we would like to clarify a few points. We are open to reframing the work as "Matrix Thank you for your comments.

The implementation of transformational pedagogy in secondary education classrooms requires a broad multiliteracy approach. Due to limited planning time and resources, high school English Literature teachers often struggle to curate diverse, thematically aligned literature text sets. This study addresses the critical need for a tool that provides scaffolds for novice educators in selecting literature texts that are diverse -- in terms of genre, theme, subtheme, and author -- yet similar in context and pedagogical merits. We have developed a recommendation system, Teaching Text Expansion for Teacher Scaffolding (T-TExTS), that suggests high school English Literature books based on pedagogical merits, genre, and thematic relevance using a knowledge graph. We constructed a domain-specific ontology using the KNowledge Acquisition and Representation Methodology (KNARM), transformed into a knowledge graph, which was then embedded using DeepWalk, biased random walk, and a hybrid of both approaches. The system was evaluated using link prediction and recommendation performance metrics, including Area Under the Curve (AUC), Mean Reciprocal Rank (MRR), Hits@K, and normalized Discounted Cumulative Gain (nDCG). DeepWalk outperformed in most ranking metrics, with the highest AUC (0.9431), whereas the hybrid model offered balanced performance. These findings demonstrate the importance of semantic, ontology-driven approaches in recommendation systems and suggest that T-TExTS can significantly ease the burden of English Literature text selection for high school educators, promoting more informed and inclusive curricular decisions. The source code for T-TExTS is available at: https://github.com/koncordantlab/TTExTS

Graph Neural Networks (GNNs) have emerged as powerful tools for supervised machine learning over graph-structured data, while sampling-based node representation learning is widely utilized in unsupervised learning. However, scalability remains a major challenge in both supervised and unsupervised learning for large graphs (e.g., those with over 1 billion nodes). The scalability bottleneck largely stems from the mini-batch sampling phase in GNNs and the random walk sampling phase in unsupervised methods. These processes often require storing features or embeddings in memory. In the context of distributed training, they require frequent, inefficient random access to data stored across different workers. Such repeated inter-worker communication for each mini-batch leads to high communication overhead and computational inefficiency. We propose GraphScale, a unified framework for both supervised and unsupervised learning to store and process large graph data distributedly. The key insight in our design is the separation of workers who store data and those who perform the training. This separation allows us to decouple computing and storage in graph training, thus effectively building a pipeline where data fetching and data computation can overlap asynchronously. Our experiments show that GraphScale outperforms state-of-the-art methods for distributed training of both GNNs and node embeddings. We evaluate GraphScale both on public and proprietary graph datasets and observe a reduction of at least 40% in end-to-end training times compared to popular distributed frameworks, without any loss in performance. While most existing methods don't support billion-node graphs for training node embeddings, GraphScale is currently deployed in production at TikTok enabling efficient learning over such large graphs.

A hypergraph is a generalization of a graph that arises naturally when attribute-sharing among entities is considered. Although a hypergraph can be converted into a graph by expanding its hyperedges into fully connected subgraphs, going the reverse way is computationally complex and NP-complete. We therefore hypothesize that a hypergraph contains more information than a graph. In addition, it is more convenient to manipulate a hypergraph directly, rather than expand it into a graph. An open problem in hypergraphs is how to accurately and efficiently calculate their node distances. Estimating node distances enables us to find a node's nearest neighbors, and perform label propagation on hypergraphs using a K-nearest neighbors (KNN) approach. In this paper, we propose a novel approach based on random walks to achieve label propagation on hypergraphs. We estimate node distances as the expected hitting times of random walks. We note that simple random walks (SRW) cannot accurately describe highly complex real-world hypergraphs, which motivates us to introduce frustrated random walks (FRW) to better describe them. We further benchmark our method against DeepWalk, and show that while the latter can achieve comparable results, FRW has a distinct computational advantage in cases where the number of targets is fairly small. For such cases, we show that FRW runs in significantly shorter time than DeepWalk. Finally, we analyze the time complexity of our method, and show that for large and sparse hypergraphs, the complexity is approximately linear, rendering it superior to the DeepWalk alternative.

An embedding is a mapping from a set of nodes of a network into a real vector space. Embeddings can have various aims like capturing the underlying graph topology and structure, node-to-node relationship, or other relevant information about the graph, its subgraphs or nodes themselves. A practical challenge with using embeddings is that there are many available variants to choose from. Selecting a small set of most promising embeddings from the long list of possible options for a given task is challenging and often requires domain expertise. Embeddings can be categorized into two main types: classical embeddings and structural embeddings. Classical embeddings focus on learning both local and global proximity of nodes, while structural embeddings learn information specifically about the local structure of nodes' neighbourhood. For classical node embeddings there exists a framework which helps data scientists to identify (in an unsupervised way) a few embeddings that are worth further investigation. Unfortunately, no such framework exists for structural embeddings. In this paper we propose a framework for unsupervised ranking of structural graph embeddings. The proposed framework, apart from assigning an aggregate quality score for a structural embedding, additionally gives a data scientist insights into properties of this embedding. It produces information which predefined node features the embedding learns, how well it learns them, and which dimensions in the embedded space represent the predefined node features. Using this information the user gets a level of explainability to an otherwise complex black-box embedding algorithm.

Node representation learning in a network is an important machine learning technique for encoding relational information in a continuous vector space while preserving the inherent properties and structures of the network. Recently, unsupervised node embedding methods such as DeepWalk, LINE, struc2vec, PTE, UserItem2vec, and RWJBG have emerged from the Skip-gram model and perform better performance in several downstream tasks such as node classification and link prediction than the existing relational models. However, providing post-hoc explanations of Skip-gram-based embeddings remains a challenging problem because of the lack of explanation methods and theoretical studies applicable for embeddings. In this paper, we first show that global explanations to the Skip-gram-based embeddings can be found by computing bridgeness under a spectral cluster-aware local perturbation. Moreover, a novel gradient-based explanation method, which we call GRAPH-wGD, is proposed that allows the top-q global explanations about learned graph embedding vectors more efficiently. Experiments show that the ranking of nodes by scores using GRAPH-wGD is highly correlated with true bridgeness scores. We also observe that the top-q node-level explanations selected by GRAPH-wGD have higher importance scores and produce more changes in class label prediction when perturbed, compared with the nodes selected by recent alternatives, using five real-world graphs.

Representation learning has shown its effectiveness in many tasks such as image classification and text mining. Network representation learning aims at learning distributed vector representation for each vertex in a network, which is also increasingly recognized as an important aspect for network analysis. Most network representation learning methods investigate network structures for learning. In reality, network vertices contain rich information (such as text), which cannot be well applied with algorithmic frameworks of typical representation learning methods. By proving that DeepWalk, a state-of-the-art network representation method, is actually equivalent to matrix factorization (MF), we propose text-associated DeepWalk (TADW). TADW incorporates text features of vertices into network representation learning under the framework of matrix factorization. We evaluate our method and various baseline methods by applying them to the task of multi-class classification of vertices. The experimental results show that, our method outperforms other baselines on all three datasets, especially when networks are noisy and training ratio is small.

Popular node embedding methods such as DeepWalk follow the paradigm of performing random walks on the graph, and then requiring each node to be proximate to those appearing along with it. Though proved to be successful in various tasks, this paradigm reduces a graph with topology to a set of sequential sentences, thus omitting global information. To produce global-aware node embeddings, we propose BiasedWalk, a biased random walk strategy that favors nodes with similar semantics. Empirical evidence suggests BiasedWalk can generally enhance global awareness of the generated embeddings.

Prediction using the ground truth sounds like an oxymoron in machine learning. However, such an unrealistic setting was used in hundreds, if not thousands of papers in the area of finding graph representations. To evaluate the multi-label problem of node classification by using the obtained representations, many works assume in the prediction stage that the number of labels of each test instance is known. In practice such ground truth information is rarely available, but we point out that such an inappropriate setting is now ubiquitous in this research area. We detailedly investigate why the situation occurs. Our analysis indicates that with unrealistic information, the performance is likely over-estimated. To see why suitable predictions were not used, we identify difficulties in applying some multi-label techniques. For the use in future studies, we propose simple and effective settings without using practically unknown information. Finally, we take this chance to conduct a fair and serious comparison of major graph-representation learning methods on multi-label node classification.

We study the problem of large-scale network embedding, which aims to learn low-dimensional latent representations for network mining applications. Recent research in the field of network embedding has led to significant progress such as DeepWalk, LINE, NetMF, NetSMF. However, the huge size of many real-world networks makes it computationally expensive to learn network embedding from the entire network. In this work, we present a novel network embedding method called "NES", which learns network embedding from a small representative subgraph. NES leverages theories from graph sampling to efficiently construct representative subgraph with smaller size which can be used to make inferences about the full network, enabling significantly improved efficiency in embedding learning. Then, NES computes the network embedding from this representative subgraph, efficiently. Compared with well-known methods, extensive experiments on networks of various scales and types demonstrate that NES achieves comparable performance and significant efficiency superiority.