Goto

Collaborating Authors

 ct-bert


CT-BERT: Learning Better Tabular Representations Through Cross-Table Pre-training

arXiv.org Artificial Intelligence

Tabular data -- also known as structured data -- is one of the most common data forms in existence, thanks to the stable development and scaled deployment of database systems in the last few decades. At present however, despite the blast brought by large pre-trained models in other domains such as ChatGPT or SAM, how can we extract common knowledge across tables at a scale that may eventually lead to generalizable representation for tabular data remains a full blank. Indeed, there have been a few works around this topic. Most (if not all) of them are limited in the scope of a single table or fixed form of a schema. In this work, we first identify the crucial research challenges behind tabular data pre-training, particularly towards the cross-table scenario. We position the contribution of this work in two folds: (i)-we collect and curate nearly 2k high-quality tabular datasets, each of which is guaranteed to possess clear semantics, clean labels, and other necessary meta information. (ii)-we propose a novel framework that allows cross-table pre-training dubbed as CT-BERT. Noticeably, in light of pioneering the scaled cross-table training, CT-BERT is fully compatible with both supervised and self-supervised schemes, where the specific instantiation of CT-BERT is very much dependent on the downstream tasks. We further propose and implement a contrastive-learning-based and masked table modeling (MTM) objective into CT-BERT, that is inspired from computer vision and natural language processing communities but sophistically tailored to tables. The extensive empirical results on 15 datasets demonstrate CT-BERT's state-of-the-art performance, where both its supervised and self-supervised setups significantly outperform the prior approaches.


COVID-19 event extraction from Twitter via extractive question answering with continuous prompts

arXiv.org Artificial Intelligence

As COVID-19 ravages the world, social media analytics could augment traditional surveys in assessing how the pandemic evolves and capturing consumer chatter that could help healthcare agencies in addressing it. This typically involves mining disclosure events that mention testing positive for the disease or discussions surrounding perceptions and beliefs in preventative or treatment options. The 2020 shared task on COVID-19 event extraction (conducted as part of the W-NUT workshop during the EMNLP conference) introduced a new Twitter dataset for benchmarking event extraction from COVID-19 tweets. In this paper, we cast the problem of event extraction as extractive question answering using recent advances in continuous prompting in language models. On the shared task test dataset, our approach leads to over 5% absolute micro-averaged F1-score improvement over prior best results, across all COVID-19 event slots. Our ablation study shows that continuous prompts have a major impact on the eventual performance.


A Scalable AI Approach for Clinical Trial Cohort Optimization

arXiv.org Artificial Intelligence

FDA has been promoting enrollment practices that could enhance the diversity of clinical trial populations, through broadening eligibility criteria. However, how to broaden eligibility remains a significant challenge. We propose an AI approach to Cohort Optimization (AICO) through transformer-based natural language processing of the eligibility criteria and evaluation of the criteria using real-world data. The method can extract common eligibility criteria variables from a large set of relevant trials and measure the generalizability of trial designs to real-world patients. It overcomes the scalability limits of existing manual methods and enables rapid simulation of eligibility criteria design for a disease of interest. A case study on breast cancer trial design demonstrates the utility of the method in improving trial generalizability.