actigraphy
A robust generalizable device-agnostic deep learning model for sleep-wake determination from triaxial wrist accelerometry
Montazeri, Nasim, Yang, Stone, Luszczynski, Dominik, Zhang, John, Gurve, Dharmendra, Centen, Andrew, Goubran, Maged, Lim, Andrew
Study Objectives: Wrist accelerometry is widely used for inferring sleep-wake state. Previous works demonstrated poor wake detection, without cross-device generalizability and validation in different age range and sleep disorders. We developed a robust deep learning model for to detect sleep-wakefulness from triaxial accelerometry and evaluated its validity across three devices and in a large adult population spanning a wide range of ages with and without sleep disorders. Methods: We collected wrist accelerometry simultaneous to polysomnography (PSG) in 453 adults undergoing clinical sleep testing at a tertiary care sleep laboratory, using three devices. We extracted features in 30-second epochs and trained a 3-class model to detect wake, sleep, and sleep with arousals, which was then collapsed into wake vs. sleep using a decision tree. To enhance wake detection, the model was specifically trained on randomly selected subjects with low sleep efficiency and/or high arousal index from one device recording and then tested on the remaining recordings. Results: The model showed high performance with F1 Score of 0.86, sensitivity (sleep) of 0.87, and specificity (wakefulness) of 0.78, and significant and moderate correlation to PSG in predicting total sleep time (R=0.69) and sleep efficiency (R=0.63). Model performance was robust to the presence of sleep disorders, including sleep apnea and periodic limb movements in sleep, and was consistent across all three models of accelerometer. Conclusions: We present a deep model to detect sleep-wakefulness from actigraphy in adults with relative robustness to the presence of sleep disorders and generalizability across diverse commonly used wrist accelerometers.
- Research Report > Experimental Study (1.00)
- Research Report > New Finding (0.71)
- Health & Medicine > Therapeutic Area > Sleep (1.00)
- Health & Medicine > Therapeutic Area > Psychiatry/Psychology (1.00)
- Health & Medicine > Therapeutic Area > Neurology > Alzheimer's Disease (0.47)
AI Foundation Models for Wearable Movement Data in Mental Health Research
Ruan, Franklin Y., Zhang, Aiwei, Oh, Jenny Y., Jin, SouYoung, Jacobson, Nicholas C.
Pretrained foundation models and transformer architectures have driven the success of large language models (LLMs) and other modern AI breakthroughs. However, similar advancements in health data modeling remain limited due to the need for innovative adaptations. Wearable movement data offers a valuable avenue for exploration, as it's a core feature in nearly all commercial smartwatches, well established in clinical and mental health research, and the sequential nature of the data shares similarities to language. We introduce the Pretrained Actigraphy Transformer (PAT), the first open source foundation model designed for time-series wearable movement data. Leveraging transformer-based architectures and novel techniques, such as patch embeddings, and pretraining on data from 29,307 participants in a national U.S. sample, PAT achieves state-of-the-art performance in several mental health prediction tasks. PAT is also lightweight and easily interpretable, making it a robust tool for mental health research.
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- North America > United States > New York (0.04)
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Transfer Learning for Real-time Deployment of a Screening Tool for Depression Detection Using Actigraphy
Ghate, Rajanikant, Kalnad, Nayan, Walambe, Rahee, Kotecha, Ketan
Automated depression screening and diagnosis is a highly relevant problem today. There are a number of limitations of the traditional depression detection methods, namely, high dependence on clinicians and biased self-reporting. In recent years, research has suggested strong potential in machine learning (ML) based methods that make use of the user's passive data collected via wearable devices. However, ML is data hungry. Especially in the healthcare domain primary data collection is challenging. In this work, we present an approach based on transfer learning, from a model trained on a secondary dataset, for the real time deployment of the depression screening tool based on the actigraphy data of users. This approach enables machine learning modelling even with limited primary data samples. A modified version of leave one out cross validation approach performed on the primary set resulted in mean accuracy of 0.96, where in each iteration one subject's data from the primary set was set aside for testing.
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Fatigue Assessment using ECG and Actigraphy Sensors
Bai, Yang, Guan, Yu, Ng, Wan-Fai
Fatigue is one of the key factors in the loss of work efficiency and health-related quality of life, and most fatigue assessment methods were based on self-reporting, which may suffer from many factors such as recall bias. To address this issue, we developed an automated system using wearable sensing and machine learning techniques for objective fatigue assessment. ECG/Actigraphy data were collected from subjects in free-living environments. Preprocessing and feature engineering methods were applied, before interpretable solution and deep learning solution were introduced. Specifically, for interpretable solution, we proposed a feature selection approach which can select less correlated and high informative features for better understanding system's decision-making process. For deep learning solution, we used state-of-the-art self-attention model, based on which we further proposed a consistency self-attention (CSA) mechanism for fatigue assessment. Extensive experiments were conducted, and very promising results were achieved.
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- Research Report > Experimental Study (0.66)
- Health & Medicine > Therapeutic Area > Cardiology/Vascular Diseases (1.00)
- Education (1.00)
- Health & Medicine > Diagnostic Medicine (0.68)
- Health & Medicine > Therapeutic Area > Neurology (0.68)
Personalized Sleep Parameters Estimation from Actigraphy: A Machine Le NSS
Background: The current gold standard for measuring sleep is polysomnography (PSG), but it can be obtrusive and costly. Actigraphy is a relatively low-cost and unobtrusive alternative to PSG. Of particular interest in measuring sleep from actigraphy is prediction of sleep-wake states. Current literature on prediction of sleep-wake states from actigraphy consists of methods that use population data, which we call generalized models. However, accounting for variability of sleep patterns across individuals calls for personalized models of sleep-wake states prediction that could be potentially better suited to individual-level data and yield more accurate estimation of sleep.
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- North America > United States > Massachusetts > Suffolk County > Boston (0.10)
Sleep Stage Classification Based on Multi-level Feature Learning and Recurrent Neural Networks via Wearable Device
Zhang, Xin, Kou, Weixuan, Chang, Eric I-Chao, Gao, He, Fan, Yubo, Xu, Yan
Abstract--This paper proposes a practical approach for automatic sleep stage classification based on a multilevel feature learning framework and Recurrent Neural Network (RNN) classifier using heart rate and wrist actigraphy derived from a wearable device. The feature learning framework is designed to extract low-and mid-level features. Low-level features capture temporal and frequency domain properties and mid-level features learn compositions and structural information of signals. Since sleep staging is a sequential problem with long-term dependencies, we take advantage of RNNs with Bidirectional Long Short-T erm Memory (BLSTM) architectures for sequence data learning. T o simulate the actual situation of daily sleep, experiments are conducted with a resting group in which sleep is recorded in resting state, and a comprehensive group in which both resting sleep and non-resting sleep are included. We evaluate the algorithm based on an eightfold cross validation to classify five sleep stages (W, N1, N2, N3, and REM). V arious comparison experiments demonstrate the effectiveness of feature learning and BLSTM. We further explore the influence of depth and width of RNNs on performance. Our method is specially proposed for wearable devices and is expected to be applicable for long-term sleep monitoring at home. Without using too much prior domain knowledge, our method has the potential to generalize sleep disorder detection. Index Terms--Heart rate, Long Short-T erm Memory, Recurrent neural networks, Sleep stage classification, Wearable device. Xin Zhang, Weixuan Kou, Y ubo Fan and Y an Xu are with the State Key Laboratory of Software Development Environment and the Key Laboratory of Biomechanics and Mechanobiology of Ministry of Education and Research Institute of Beihang University in Shenzhen and Beijing Advanced Innovation Centre for Biomedical Engineering, Beihang University, Beijing 100191, China (email: xinzhang0376@gmail.com; Eric I-Chao Chang, and Y an Xu are with Microsoft Research, Beijing 100080, China (email:echang@microsoft.com; xuyan04@gmail.com).
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- Asia > China > Guangdong Province > Shenzhen (0.24)
- North America > United States > Minnesota > Hennepin County > Minneapolis (0.14)
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- Health & Medicine > Therapeutic Area > Sleep (1.00)
- Health & Medicine > Therapeutic Area > Neurology (1.00)
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- Health & Medicine > Health Care Technology (1.00)