Transformers serve as the backbone architectures of Foundational Models, where a domain-specific tokenizer helps them adapt to various domains. Graph Transformers (GTs) have recently emerged as a leading model in geometric deep learning, outperforming Graph Neural Networks (GNNs) in various graph learning tasks. However, the development of tokenizers for graphs has lagged behind other modalities, with existing approaches relying on heuristics or GNNs co-trained with Transformers. To address this, we introduce GQT (Graph Quantized Tokenizer), which decouples tokenizer training from Transformer training by leveraging multitask graph self-supervised learning, yielding robust and generalizable graph tokens. Furthermore, the GQT utilizes Residual Vector Quantization (RVQ) to learn hierarchical discrete tokens, resulting in significantly reduced memory requirements and improved generalization capabilities. By combining the GQT with token modulation, a Transformer encoder achieves state-of-the-art performance on 16 out of 18 benchmarks, including large-scale homophilic and heterophilic datasets. Unlike message-passing Graph Neural Networks (GNNs), which rely on strong locality inductive biases (Battaglia et al., 2018; Veličković et al., 2018; Hou et al., 2020; Hamilton et al., 2017a; Kipf & Welling, 2017), GTs are inherently more expressive due to their ability to capture long-range interactions between nodes (Ma et al., 2023). This is particularly beneficial in heterophilous settings where local alignment does not hold (Fu et al., 2024). GTs possess an expressive power at least equivalent to the 2-Weisfeiler-Lehman (WL) isomorphism test (Kim et al., 2022), which is sufficient for most real-world tasks (Zopf, 2022). This surpasses the expressive power of message-passing GNNs, which are limited to the 1-WL test (Ying et al., 2021a).

Language Models (LMs) are increasingly challenging the dominance of domain-specific models, including Graph Neural Networks (GNNs) and Graph Transformers (GTs), in graph learning tasks. Following this trend, we propose a novel approach that empowers off-the-shelf LMs to achieve performance comparable to state-of-the-art GNNs on node classification tasks, without requiring any architectural modification. By preserving the LM's original architecture, our approach retains a key benefit of LM instruction tuning: the ability to jointly train on diverse datasets, fostering greater flexibility and efficiency. To achieve this, we introduce two key augmentation strategies: (1) Enriching LMs' input using topological and semantic retrieval methods, which provide richer contextual information, and (2) guiding the LMs' classification process through a lightweight GNN classifier that effectively prunes class candidates. Our experiments on real-world datasets show that backbone Flan-T5 models equipped with these augmentation strategies outperform state-of-the-art text-output node classifiers and are comparable to top-performing vector-output node classifiers. By bridging the gap between specialized task-specific node classifiers and general LMs, this work paves the way for more versatile and widely applicable graph learning models. We will open-source the code upon publication.

Graph transformer has been proven as an effective graph learning method for its adoption of attention mechanism that is capable of capturing expressive representations from complex topological and feature information of graphs. Graph transformer conventionally performs dense attention (or global attention) for every pair of nodes to learn node representation vectors, resulting in quadratic computational costs that are unaffordable for large-scale graph data. Therefore, mini-batch training for graph transformers is a promising direction, but limited samples in each mini-batch can not support effective dense attention to encode informative representations. Facing this bottleneck, (1) we start by assigning each node a token list that is sampled by personalized PageRank (PPR) and then apply standard multi-head self-attention only on this list to compute its node representations. This PPR tokenization method decouples model training from complex graph topological information and makes heavy feature engineering offline and independent, such that mini-batch training of graph transformers is possible by loading each node's token list in batches. We further prove this PPR tokenization is viable as a graph convolution network with a fixed polynomial filter and jumping knowledge. However, only using personalized PageRank may limit information carried by a token list, which could not support different graph inductive biases for model training. To this end, (2) we rewire graphs by introducing multiple types of virtual connections through structure- and content-based super nodes that enable PPR tokenization to encode local and global contexts, long-range interaction, and heterophilous information into each node's token list, and then formalize our Virtual Connection Ranking based Graph Transformer (VCR-Graphormer).

This paper proposes a computational model for policy administration. As an organization evolves, new users and resources are gradually placed under the mediation of the access control model. Each time such new entities are added, the policy administrator must deliberate on how the access control policy shall be revised to reflect the new reality. A well-designed access control model must anticipate such changes so that the administration cost does not become prohibitive when the organization scales up. Unfortunately, past Access Control research does not offer a formal way to quantify the cost of policy administration. In this work, we propose to model ongoing policy administration in an active learning framework. Administration cost can be quantified in terms of query complexity. We demonstrate the utility of this approach by applying it to the evolution of protection domains. We also modelled different policy administration strategies in our framework. This allowed us to formally demonstrate that domain-based policies have a cost advantage over access control matrices because of the use of heuristic reasoning when the policy evolves. To the best of our knowledge, this is the first work to employ an active learning framework to study the cost of policy deliberation and demonstrate the cost advantage of heuristic policy administration.

Large language models (LLMs) have achieved impressive linguistic capabilities. However, a key limitation persists in their lack of human-like memory faculties. LLMs exhibit constrained memory retention across sequential interactions, hindering complex reasoning. This paper explores the potential of applying cognitive psychology's working memory frameworks, to enhance LLM architecture. The limitations of traditional LLM memory designs are analyzed, including their isolation of distinct dialog episodes and lack of persistent memory links. To address this, an innovative model is proposed incorporating a centralized Working Memory Hub and Episodic Buffer access to retain memories across episodes. This architecture aims to provide greater continuity for nuanced contextual reasoning during intricate tasks and collaborative scenarios. While promising, further research is required into optimizing episodic memory encoding, storage, prioritization, retrieval, and security. Overall, this paper provides a strategic blueprint for developing LLM agents with more sophisticated, human-like memory capabilities, highlighting memory mechanisms as a vital frontier in artificial general intelligence.

We investigate various prompting strategies for enhancing personalized recommendation performance with large language models (LLMs) through input augmentation. Our proposed approach, termed LLM-Rec, encompasses four distinct prompting strategies: (1) basic prompting, (2) recommendation-driven prompting, (3) engagement-guided prompting, and (4) recommendation-driven + engagement-guided prompting. Our empirical experiments show that incorporating the augmented input text generated by LLM leads to improved recommendation performance. Recommendation-driven and engagement-guided prompting strategies are found to elicit LLM's understanding of global and local item characteristics. This finding highlights the importance of leveraging diverse prompts and input augmentation techniques to enhance the recommendation capabilities with LLMs.

While graph heterophily has been extensively studied in recent years, a fundamental research question largely remains nascent: How and to what extent will graph heterophily affect the prediction performance of graph neural networks (GNNs)? In this paper, we aim to demystify the impact of graph heterophily on GNN spectral filters. Our theoretical results show that it is essential to design adaptive polynomial filters that adapts different degrees of graph heterophily to guarantee the generalization performance of GNNs. Inspired by our theoretical findings, we propose a simple yet powerful GNN named GPatcher by leveraging the MLP-Mixer architectures. Our approach comprises two main components: (1) an adaptive patch extractor function that automatically transforms each node's non-Euclidean graph representations to Euclidean patch representations given different degrees of heterophily, and (2) an efficient patch mixer function that learns salient node representation from both the local context information and the global positional information. Through extensive experiments, the GPatcher model demonstrates outstanding performance on node classification compared with popular homophily GNNs and state-of-the-art heterophily GNNs.

Transferring knowledge across graphs plays a pivotal role in many high-stake domains, ranging from transportation networks to e-commerce networks, from neuroscience to finance. To date, the vast majority of existing works assume both source and target domains are sampled from a universal and stationary distribution. However, many real-world systems are intrinsically dynamic, where the underlying domains are evolving over time. To bridge the gap, we propose to shift the problem to the dynamic setting and ask: given the label-rich source graphs and the label-scarce target graphs observed in previous T timestamps, how can we effectively characterize the evolving domain discrepancy and optimize the generalization performance of the target domain at the incoming T+1 timestamp? To answer the question, for the first time, we propose a generalization bound under the setting of dynamic transfer learning across graphs, which implies the generalization performance is dominated by domain evolution and domain discrepancy between source and target domains. Inspired by the theoretical results, we propose a novel generic framework DyTrans to improve knowledge transferability across dynamic graphs. In particular, we start with a transformer-based temporal encoding module to model temporal information of the evolving domains; then, we further design a dynamic domain unification module to efficiently learn domain-invariant representations across the source and target domains. Finally, extensive experiments on various real-world datasets demonstrate the effectiveness of DyTrans in transferring knowledge from dynamic source domains to dynamic target domains.

Recurrent neural network (RNN) and self-attention mechanism (SAM) are the de facto methods to extract spatial-temporal information for temporal graph learning. Interestingly, we found that although both RNN and SAM could lead to a good performance, in practice neither of them is always necessary. In this paper, we propose GraphMixer, a conceptually and technically simple architecture that consists of three components: 1 a link-encoder that is only based on multi-layer perceptrons (MLP) to summarize the information from temporal links, 2 a node-encoder that is only based on neighbor mean-pooling to summarize node information, and 3 an MLP-based link classifier that performs link prediction based on the outputs of the encoders. These results motivate us to rethink the importance of simpler model architecture. In recent years, temporal graph learning has been recognized as an important machine learning problem and has become the cornerstone behind a wealth of high-impact applications Yu et al. (2018); Bui et al. (2021); Kazemi et al. (2020); Zhou et al. (2020); Cong et al. (2021b). Temporal link prediction is one of the classic downstream tasks which focuses on predicting the future interactions among nodes. For example, in an ads ranking system, the user-ad clicks can be modeled as a temporal bipartite graph whose nodes represent users and ads, and links are associated with timestamps indicating when users click ads. Link prediction between them can be used to predict whether a user will click an ad. Designing graph learning models that can capture node evolutionary patterns and accurately predict future links is a crucial direction for many real-world recommender systems. In temporal graph learning, recurrent neural network (RNN) and self-attention mechanism (SAM) have become the de facto standard for temporal graph learning Kumar et al. (2019); Sankar et al. (2020); Xu et al. (2020); Rossi et al. (2020); Wang et al. (2020), and the majority of the existing works focus on designing neural architectures with one of them and additional components to learn representations from raw data. Although powerful, these methods are conceptually and technically complicated with advanced model architectures.