Recent advances in context-augmented generation (CAG) techniques, particularly retrieval-augmented generation (RAG) (Gupta et al., 2024; Gao et al., 2023) and in-context learning (ICL) (Dong et al., 2022; Wei et al., 2022), have been widely adopted in large language models (LLMs) (Dubey et al., 2024; Achiam et al., 2023), improving their ability to generalize to unseen tasks with contextual information, as demonstrated in Figure 1 (top). These techniques employ a sequential encoding process to ground LLM inputs with knowledge from external sources: concatenating the retrieved texts into one sequence, and encoding the sequence into key-value (KV) states as the context for subsequent queries. While this new, significantly longer input improves performance, the increased latency in context prefilling becomes a bottleneck in tasks that require long inputs but generate short outputs (Bai et al., 2023; Agarwal et al., 2024; Jiang et al., 2024b). For example, prefilling a 128K context takes 17 seconds, whereas generating 256 tokens requires only 6 seconds. This discrepancy leaves significant room to improve the practical efficiency of CAG systems in real-world deployments (Liu, 2022; Chase, 2022).

We introduce our first-generation reasoning models, DeepSeek-R1-Zero and DeepSeek-R1. DeepSeek-R1-Zero, a model trained via large-scale reinforcement learning (RL) without supervised fine-tuning (SFT) as a preliminary step, demonstrates remarkable reasoning capabilities. Through RL, DeepSeek-R1-Zero naturally emerges with numerous powerful and intriguing reasoning behaviors. However, it encounters challenges such as poor readability, and language mixing. To address these issues and further enhance reasoning performance, we introduce DeepSeek-R1, which incorporates multi-stage training and cold-start data before RL. DeepSeek-R1 achieves performance comparable to OpenAI-o1-1217 on reasoning tasks. To support the research community, we open-source DeepSeek-R1-Zero, DeepSeek-R1, and six dense models (1.5B, 7B, 8B, 14B, 32B, 70B) distilled from DeepSeek-R1 based on Qwen and Llama.

Spatial-temporal data collected across different geographic locations often suffer from missing values, posing challenges to data analysis. Existing methods primarily leverage fixed spatial graphs to impute missing values, which implicitly assume that the spatial relationship is roughly the same for all features across different locations. However, they may overlook the different spatial relationships of diverse features recorded by sensors in different locations. To address this, we introduce the multi-scale Graph Structure Learning framework for spatial-temporal Imputation (GSLI) that dynamically adapts to the heterogeneous spatial correlations. Our framework encompasses node-scale graph structure learning to cater to the distinct global spatial correlations of different features, and feature-scale graph structure learning to unveil common spatial correlation across features within all stations. Integrated with prominence modeling, our framework emphasizes nodes and features with greater significance in the imputation process. Furthermore, GSLI incorporates cross-feature and cross-temporal representation learning to capture spatial-temporal dependencies. Evaluated on six real incomplete spatial-temporal datasets, GSLI showcases the improvement in data imputation.

We present DeepSeek-V3, a strong Mixture-of-Experts (MoE) language model with 671B total parameters with 37B activated for each token. To achieve efficient inference and cost-effective training, DeepSeek-V3 adopts Multi-head Latent Attention (MLA) and DeepSeekMoE architectures, which were thoroughly validated in DeepSeek-V2. Furthermore, DeepSeek-V3 pioneers an auxiliary-loss-free strategy for load balancing and sets a multi-token prediction training objective for stronger performance. We pre-train DeepSeek-V3 on 14.8 trillion diverse and high-quality tokens, followed by Supervised Fine-Tuning and Reinforcement Learning stages to fully harness its capabilities. Comprehensive evaluations reveal that DeepSeek-V3 outperforms other open-source models and achieves performance comparable to leading closed-source models. Despite its excellent performance, DeepSeek-V3 requires only 2.788M H800 GPU hours for its full training. In addition, its training process is remarkably stable. Throughout the entire training process, we did not experience any irrecoverable loss spikes or perform any rollbacks.

Current PEFT methods for LLMs can achieve either high quality, efficient training, or scalable serving, but not all three simultaneously. To address this limitation, we investigate sparse fine-tuning and observe a remarkable improvement in generalization ability. Utilizing this key insight, we propose a family of Structured Sparse Fine-Tuning (S$^{2}$FT) methods for LLMs, which concurrently achieve state-of-the-art fine-tuning performance, training efficiency, and inference scalability. S$^{2}$FT accomplishes this by "selecting sparsely and computing densely". It selects a few heads and channels in the MHA and FFN modules for each Transformer block, respectively. Next, it co-permutes weight matrices on both sides of the coupled structures in LLMs to connect the selected components in each layer into a dense submatrix. Finally, S$^{2}$FT performs in-place gradient updates on all submatrices. Through theoretical analysis and empirical results, our method prevents forgetting while simplifying optimization, delivers SOTA performance on both commonsense and arithmetic reasoning with 4.6% and 1.3% average improvements compared to LoRA, and surpasses full FT by 11.5% when generalizing to various domains after instruction tuning. Using our partial backpropagation algorithm, S$^{2}$FT saves training memory up to 3$\times$ and improves latency by 1.5-2.7$\times$ compared to full FT, while delivering an average 10% improvement over LoRA on both metrics. We further demonstrate that the weight updates in S$^{2}$FT can be decoupled into adapters, enabling effective fusion, fast switch, and efficient parallelism for serving multiple fine-tuned models.

Circuit discovery with edge-level ablation has become a foundational framework for mechanism interpretability of language models. However, its focus on individual edges often overlooks the sequential, path-level causal relationships that underpin complex behaviors, thus potentially leading to misleading or incomplete circuit discoveries. To address this issue, we propose a novel path-level circuit discovery framework capturing how behaviors emerge through interconnected linear chain and build towards complex behaviors. Our framework is constructed upon a fully-disentangled linear combinations of ``memory circuits'' decomposed from the original model. To discover functional circuit paths, we leverage a 2-step pruning strategy by first reducing the computational graph to a faithful and minimal subgraph and then applying causal mediation to identify common paths of a specific skill, termed as skill paths. In contrast to circuit graph from existing works, we focus on the complete paths of a generic skill rather than on the fine-grained responses to individual components of the input. To demonstrate this, we explore three generic language skills, namely Previous Token Skill, Induction Skill and In-Context Learning Skill using our framework and provide more compelling evidence to substantiate stratification and inclusiveness of these skills.

The theory of evidence reasoning has been applied to collective decision-making in recent years. However, existing distributed evidence fusion methods lead to participants' preference leakage and fusion failures as they directly exchange raw evidence and do not assess evidence credibility like centralized credible evidence fusion (CCEF) does. To do so, a privacy-preserving distributed credible evidence fusion method with three-level consensus (PCEF) is proposed in this paper. In evidence difference measure (EDM) neighbor consensus, an evidence-free equivalent expression of EDM among neighbored agents is derived with the shared dot product protocol for pignistic probability and the identical judgment of two events with maximal subjective probabilities, so that evidence privacy is guaranteed due to such irreversible evidence transformation. In EDM network consensus, the non-neighbored EDMs are inferred and neighbored EDMs reach uniformity via interaction between linear average consensus (LAC) and low-rank matrix completion with rank adaptation to guarantee EDM consensus convergence and no solution of inferring raw evidence in numerical iteration style. In fusion network consensus, a privacy-preserving LAC with a self-cancelling differential privacy term is proposed, where each agent adds its randomness to the sharing content and step-by-step cancels such randomness in consensus iterations. Besides, the sufficient condition of the convergence to the CCEF is explored, and it is proven that raw evidence is impossibly inferred in such an iterative consensus. The simulations show that PCEF is close to CCEF both in credibility and fusion results and obtains higher decision accuracy with less time-comsuming than existing methods.

Large Language Models (LLMs) have recently demonstrated remarkable performance in general tasks across various fields. However, their effectiveness within specific domains such as drug development remains challenges. To solve these challenges, we introduce \textbf{Y-Mol}, forming a well-established LLM paradigm for the flow of drug development. Y-Mol is a multiscale biomedical knowledge-guided LLM designed to accomplish tasks across lead compound discovery, pre-clinic, and clinic prediction. By integrating millions of multiscale biomedical knowledge and using LLaMA2 as the base LLM, Y-Mol augments the reasoning capability in the biomedical domain by learning from a corpus of publications, knowledge graphs, and expert-designed synthetic data. The capability is further enriched with three types of drug-oriented instructions: description-based prompts from processed publications, semantic-based prompts for extracting associations from knowledge graphs, and template-based prompts for understanding expert knowledge from biomedical tools. Besides, Y-Mol offers a set of LLM paradigms that can autonomously execute the downstream tasks across the entire process of drug development, including virtual screening, drug design, pharmacological properties prediction, and drug-related interaction prediction. Our extensive evaluations of various biomedical sources demonstrate that Y-Mol significantly outperforms general-purpose LLMs in discovering lead compounds, predicting molecular properties, and identifying drug interaction events.

Controllable music generation promotes the interaction between humans and composition systems by projecting the users' intent on their desired music. The challenge of introducing controllability is an increasingly important issue in the symbolic music generation field. When building controllable generative popular multi-instrument music systems, two main challenges typically present themselves, namely weak controllability and poor music quality. To address these issues, we first propose spatiotemporal features as powerful and fine-grained controls to enhance the controllability of the generative model. In addition, an efficient music representation called REMI_Track is designed to convert multitrack music into multiple parallel music sequences and shorten the sequence length of each track with Byte Pair Encoding (BPE) techniques. Subsequently, we release BandControlNet, a conditional model based on parallel Transformers, to tackle the multiple music sequences and generate high-quality music samples that are conditioned to the given spatiotemporal control features. More concretely, the two specially designed modules of BandControlNet, namely structure-enhanced self-attention (SE-SA) and Cross-Track Transformer (CTT), are utilized to strengthen the resulting musical structure and inter-track harmony modeling respectively. Experimental results tested on two popular music datasets of different lengths demonstrate that the proposed BandControlNet outperforms other conditional music generation models on most objective metrics in terms of fidelity and inference speed and shows great robustness in generating long music samples. The subjective evaluations show BandControlNet trained on short datasets can generate music with comparable quality to state-of-the-art models, while outperforming them significantly using longer datasets.

We present DeepSeek-V2, a strong Mixture-of-Experts (MoE) language model characterized by economical training and efficient inference. It comprises 236B total parameters, of which 21B are activated for each token, and supports a context length of 128K tokens. DeepSeek-V2 adopts innovative architectures including Multi-head Latent Attention (MLA) and DeepSeekMoE. MLA guarantees efficient inference through significantly compressing the Key-Value (KV) cache into a latent vector, while DeepSeekMoE enables training strong models at an economical cost through sparse computation. Compared with DeepSeek 67B, DeepSeek-V2 achieves significantly stronger performance, and meanwhile saves 42.5% of training costs, reduces the KV cache by 93.3%, and boosts the maximum generation throughput to 5.76 times. We pretrain DeepSeek-V2 on a high-quality and multi-source corpus consisting of 8.1T tokens, and further perform Supervised Fine-Tuning (SFT) and Reinforcement Learning (RL) to fully unlock its potential. Evaluation results show that, even with only 21B activated parameters, DeepSeek-V2 and its chat versions still achieve top-tier performance among open-source models.