In recent years, Graph Neural Networks (GNNs) have achieved remarkable success in many graph mining tasks. However, scaling them to large graphs is challenging due to the high computational and storage costs of repeated feature propagation and non-linear transformation during training. One commonly employed approach to address this challenge is model-simplification, which only executes the Propagation (P) once in the pre-processing, and Combine (C) these receptive fields in different ways and then feed them into a simple model for better performance. Despite their high predictive performance and scalability, these methods still face two limitations. First, existing approaches mainly focus on exploring different C methods from the model perspective, neglecting the crucial problem of performance degradation with increasing P depth from the data-centric perspective, known as the over-smoothing problem. Second, pre-processing overhead takes up most of the end-to-end processing time, especially for large-scale graphs. To address these limitations, we present random walk with noise masking (RMask), a plug-and-play module compatible with the existing model-simplification works. This module enables the exploration of deeper GNNs while preserving their scalability. Unlike the previous model-simplification works, we focus on continuous P and found that the noise existing inside each P is the cause of the over-smoothing issue, and use the efficient masking mechanism to eliminate them. Experimental results on six real-world datasets demonstrate that model-simplification works equipped with RMask yield superior performance compared to their original version and can make a good trade-off between accuracy and efficiency.

Graph Contrastive Learning frameworks have demonstrated success in generating high-quality node representations. The existing research on efficient data augmentation methods and ideal pretext tasks for graph contrastive learning remains limited, resulting in suboptimal node representation in the unsupervised setting. In this paper, we introduce LAC, a graph contrastive learning framework with learnable data augmentation in an orthogonal continuous space. To capture the representative information in the graph data during augmentation, we introduce a continuous view augmenter, that applies both a masked topology augmentation module and a cross-channel feature augmentation module to adaptively augment the topological information and the feature information within an orthogonal continuous space, respectively. The orthogonal nature of continuous space ensures that the augmentation process avoids dimension collapse. To enhance the effectiveness of pretext tasks, we propose an information-theoretic principle named InfoBal and introduce corresponding pretext tasks. These tasks enable the continuous view augmenter to maintain consistency in the representative information across views while maximizing diversity between views, and allow the encoder to fully utilize the representative information in the unsupervised setting. Our experimental results show that LAC significantly outperforms the state-of-the-art frameworks.

Automatic retinal layer segmentation with medical images, such as optical coherence tomography (OCT) images, serves as an important tool for diagnosing ophthalmic diseases. However, it is challenging to achieve accurate segmentation due to low contrast and blood flow noises presented in the images. In addition, the algorithm should be light-weight to be deployed for practical clinical applications. Therefore, it is desired to design a light-weight network with high performance for retinal layer segmentation. In this paper, we propose LightReSeg for retinal layer segmentation which can be applied to OCT images. Specifically, our approach follows an encoder-decoder structure, where the encoder part employs multi-scale feature extraction and a Transformer block for fully exploiting the semantic information of feature maps at all scales and making the features have better global reasoning capabilities, while the decoder part, we design a multi-scale asymmetric attention (MAA) module for preserving the semantic information at each encoder scale. The experiments show that our approach achieves a better segmentation performance compared to the current state-of-the-art method TransUnet with 105.7M parameters on both our collected dataset and two other public datasets, with only 3.3M parameters.

To handle graphs in which features or connectivities are evolving over time, a series of temporal graph neural networks (TGNNs) have been proposed. Despite the success of these TGNNs, the previous TGNN evaluations reveal several limitations regarding four critical issues: 1) inconsistent datasets, 2) inconsistent evaluation pipelines, 3) lacking workload diversity, and 4) lacking efficient comparison. Overall, there lacks an empirical study that puts TGNN models onto the same ground and compares them comprehensively. To this end, we propose BenchTemp, a general benchmark for evaluating TGNN models on various workloads. BenchTemp provides a set of benchmark datasets so that different TGNN models can be fairly compared. Further, BenchTemp engineers a standard pipeline that unifies the TGNN evaluation. With BenchTemp, we extensively compare the representative TGNN models on different tasks (e.g., link prediction and node classification) and settings (transductive and inductive), w.r.t. both effectiveness and efficiency metrics. We have made BenchTemp publicly available at https://github.com/qianghuangwhu/benchtemp.