Vogelstein, Joshua
Vertex Classification on Weighted Networks
Helm, Hayden, Vogelstein, Joshua, Priebe, Carey
This paper proposes a discrimination technique for vertices in a weighted network. We assume that the edge weights and adjacencies in the network are conditionally independent and that both sources of information encode class membership information. In particular, we introduce a edge weight distribution matrix to the standard K-Block Stochastic Block Model to model weighted networks. This allows us to develop simple yet powerful extensions of classification techniques using the spectral embedding of the unweighted adjacency matrix. We consider two assumptions on the edge weight distributions and propose classification procedures in both settings. We show the effectiveness of the proposed classifiers by comparing them to quadratic discriminant analysis following the spectral embedding of a transformed weighted network. Moreover, we discuss and show how the methods perform when the edge weights do not encode class membership information.
Robust Vertex Classification
Chen, Li, Shen, Cencheng, Vogelstein, Joshua, Priebe, Carey
For random graphs distributed according to stochastic blockmodels, a special case of latent position graphs, adjacency spectral embedding followed by appropriate vertex classification is asymptotically Bayes optimal; but this approach requires knowledge of and critically depends on the model dimension. In this paper, we propose a sparse representation vertex classifier which does not require information about the model dimension. This classifier represents a test vertex as a sparse combination of the vertices in the training set and uses the recovered coefficients to classify the test vertex. We prove consistency of our proposed classifier for stochastic blockmodels, and demonstrate that the sparse representation classifier can predict vertex labels with higher accuracy than adjacency spectral embedding approaches via both simulation studies and real data experiments. Our results demonstrate the robustness and effectiveness of our proposed vertex classifier when the model dimension is unknown.
Robust Multimodal Graph Matching: Sparse Coding Meets Graph Matching
Fiori, Marcelo, Sprechmann, Pablo, Vogelstein, Joshua, Muse, Pablo, Sapiro, Guillermo
Graph matching is a challenging problem with very important applications in a wide range of fields, from image and video analysis to biological and biomedical problems. We propose a robust graph matching algorithm inspired in sparsity-related techniques. We cast the problem, resembling group or collaborative sparsity formulations, as a non-smooth convex optimization problem that can be efficiently solved using augmented Lagrangian techniques. The method can deal with weighted or unweighted graphs, as well as multimodal data, where different graphs represent different types of data. The proposed approach is also naturally integrated with collaborative graph inference techniques, solving general network inference problems where the observed variables, possibly coming from different modalities, are not in correspondence. The algorithm is tested and compared with state-of-the-art graph matching techniques in both synthetic and real graphs. We also present results on multimodal graphs and applications to collaborative inference of brain connectivity from alignment-free functional magnetic resonance imaging (fMRI) data.
Multiscale Dictionary Learning for Estimating Conditional Distributions
Petralia, Francesca, Vogelstein, Joshua, Dunson, David B.
Nonparametric estimation of the conditional distribution of a response given high-dimensional features is a challenging problem. It is important to allow not only the mean but also the variance and shape of the response density to change flexibly with features, which are massive-dimensional. We propose a multiscale dictionary learning model, which expresses the conditional response density as a convex combination of dictionary densities, with the densities used and their weights dependent on the path through a tree decomposition of the feature space. A fast graph partitioning algorithm is applied to obtain the tree decomposition, with Bayesian methods then used to adaptively prune and average over different sub-trees in a soft probabilistic manner. The algorithm scales efficiently to approximately one million features. State of the art predictive performance is demonstrated for toy examples and two neuroscience applications including up to a million features.
Robust Multimodal Graph Matching: Sparse Coding Meets Graph Matching
Fiori, Marcelo, Sprechmann, Pablo, Vogelstein, Joshua, Musé, Pablo, Sapiro, Guillermo
Graph matching is a challenging problem with very important applications in a wide range of fields, from image and video analysis to biological and biomedical problems. We propose a robust graph matching algorithm inspired in sparsity-related techniques. We cast the problem, resembling group or collaborative sparsity formulations, as a non-smooth convex optimization problem that can be efficiently solved using augmented Lagrangian techniques. The method can deal with weighted or unweighted graphs, as well as multimodal data, where different graphs represent different types of data. The proposed approach is also naturally integrated with collaborative graph inference techniques, solving general network inference problems where the observed variables, possibly coming from different modalities, are not in correspondence. The algorithm is tested and compared with state-of-the-art graph matching techniques in both synthetic and real graphs. We also present results on multimodal graphs and applications to collaborative inference of brain connectivity from alignment-free functional magnetic resonance imaging (fMRI) data. The code is publicly available.
Psychiatry: Insights into depression through normative decision-making models
Huys, Quentin J., Vogelstein, Joshua, Dayan, Peter
Decision making lies at the very heart of many psychiatric diseases. It is also a central theoretical concern in a wide variety of fields and has undergone detailed, in-depth, analyses. We take as an example Major Depressive Disorder (MDD), applying insights from a Bayesian reinforcement learning framework. We focus on anhedonia and helplessness. Helplessness--a core element in the conceptualizations ofMDD that has lead to major advances in its treatment, pharmacological and neurobiological understanding--is formalized as a simple prior over the outcome entropy of actions in uncertain environments.