Goto

Collaborating Authors

 Redaelli, Alberto


Learning Hemodynamic Scalar Fields on Coronary Artery Meshes: A Benchmark of Geometric Deep Learning Models

arXiv.org Artificial Intelligence

Coronary artery disease, caused by the narrowing of coronary vessels due to atherosclerosis, is the leading cause of death worldwide. The diagnostic gold standard, fractional flow reserve (FFR), measures the trans-stenotic pressure ratio during maximal vasodilation but is invasive and costly. This has driven the development of virtual FFR (vFFR) using computational fluid dynamics (CFD) to simulate coronary flow. Geometric deep learning algorithms have shown promise for learning features on meshes, including cardiovascular research applications. This study empirically analyzes various backends for predicting vFFR fields in coronary arteries as CFD surrogates, comparing six backends for learning hemodynamics on meshes using CFD solutions as ground truth. The study has two parts: i) Using 1,500 synthetic left coronary artery bifurcations, models were trained to predict pressure-related fields for vFFR reconstruction, comparing different learning variables. ii) Using 427 patient-specific CFD simulations, experiments were repeated focusing on the best-performing learning variable from the synthetic dataset. Most backends performed well on the synthetic dataset, especially when predicting pressure drop over the manifold. Transformer-based backends outperformed others when predicting pressure and vFFR fields and were the only models achieving strong performance on patient-specific data, excelling in both average per-point error and vFFR accuracy in stenotic lesions. These results suggest geometric deep learning backends can effectively replace CFD for simple geometries, while transformer-based networks are superior for complex, heterogeneous datasets. Pressure drop was identified as the optimal network output for learning pressure-related fields.


Deep vectorised operators for pulsatile hemodynamics estimation in coronary arteries from a steady-state prior

arXiv.org Artificial Intelligence

Cardiovascular hemodynamic fields provide valuable medical decision markers for coronary artery disease. Computational fluid dynamics (CFD) is the gold standard for accurate, non-invasive evaluation of these quantities in vivo. In this work, we propose a time-efficient surrogate model, powered by machine learning, for the estimation of pulsatile hemodynamics based on steady-state priors. We introduce deep vectorised operators, a modelling framework for discretisation independent learning on infinite-dimensional function spaces. The underlying neural architecture is a neural field conditioned on hemodynamic boundary conditions. Importantly, we show how relaxing the requirement of point-wise action to permutation-equivariance leads to a family of models that can be parametrised by message passing and self-attention layers. We evaluate our approach on a dataset of 74 stenotic coronary arteries extracted from coronary computed tomography angiography (CCTA) with patient-specific pulsatile CFD simulations as ground truth. We show that our model produces accurate estimates of the pulsatile velocity and pressure while being agnostic to re-sampling of the source domain (discretisation independence). This shows that deep vectorised operators are a powerful modelling tool for cardiovascular hemodynamics estimation in coronary arteries and beyond.


Augmented Reality and Human-Robot Collaboration Framework for Percutaneous Nephrolithotomy

arXiv.org Artificial Intelligence

During Percutaneous Nephrolithotomy (PCNL) operations, the surgeon is required to define the incision point on the patient's back, align the needle to a pre-planned path, and perform puncture operations afterward. The procedure is currently performed manually using ultrasound or fluoroscopy imaging for needle orientation, which, however, implies limited accuracy and low reproducibility. This work incorporates Augmented Reality (AR) visualization with an optical see-through head-mounted display (OST-HMD) and Human-Robot Collaboration (HRC) framework to empower the surgeon's task completion performance. In detail, Eye-to-Hand calibration, system registration, and hologram model registration are performed to realize visual guidance. A Cartesian impedance controller is used to guide the operator during the needle puncture task execution. Experiments are conducted to verify the system performance compared with conventional manual puncture procedures and a 2D monitor-based visualisation interface. The results showed that the proposed framework achieves the lowest median and standard deviation error across all the experimental groups, respectively. Furthermore, the NASA-TLX user evaluation results indicate that the proposed framework requires the lowest workload score for task completion compared to other experimental setups. The proposed framework exhibits significant potential for clinical application in the PCNL task, as it enhances the surgeon's perception capability, facilitates collision-free needle insertion path planning, and minimises errors in task completion.


Implicit neural representations for unsupervised super-resolution and denoising of 4D flow MRI

arXiv.org Artificial Intelligence

4D flow MRI is a non-invasive imaging method that can measure blood flow velocities over time. However, the velocity fields detected by this technique have limitations due to low resolution and measurement noise. Coordinate-based neural networks have been researched to improve accuracy, with SIRENs being suitable for super-resolution tasks. Our study investigates SIRENs for time-varying 3-directional velocity fields measured in the aorta by 4D flow MRI, achieving denoising and super-resolution. We trained our method on voxel coordinates and benchmarked our approach using synthetic measurements and a real 4D flow MRI scan. Our optimized SIREN architecture outperformed state-of-the-art techniques, producing denoised and super-resolved velocity fields from clinical data. Our approach is quick to execute and straightforward to implement for novel cases, achieving 4D super-resolution.